Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12660 and CA264_12665 overlap by 17 nucleotides CA264_12665 and CA264_12670 are separated by 104 nucleotides CA264_12670 and CA264_12675 overlap by 14 nucleotides
CA264_12660: CA264_12660 - hypothetical protein, at 2,955,032 to 2,956,099
_12660
CA264_12665: CA264_12665 - phosphatase PAP2 family protein, at 2,956,083 to 2,956,769
_12665
CA264_12670: CA264_12670 - dolichol-phosphate mannosyltransferase, at 2,956,874 to 2,957,635
_12670
CA264_12675: CA264_12675 - lauroyl acyltransferase, at 2,957,622 to 2,958,278
_12675
Position (kb)
2956
2957 Strain fitness (log2 ratio)
-1
0
1
2 at 2955.150 kb on - strand, within CA264_12660 at 2955.153 kb on - strand, within CA264_12660 at 2955.170 kb on + strand, within CA264_12660 at 2955.170 kb on + strand, within CA264_12660 at 2955.172 kb on + strand, within CA264_12660 at 2955.208 kb on + strand, within CA264_12660 at 2955.208 kb on + strand, within CA264_12660 at 2955.208 kb on + strand, within CA264_12660 at 2955.209 kb on - strand, within CA264_12660 at 2955.209 kb on - strand, within CA264_12660 at 2955.209 kb on - strand, within CA264_12660 at 2955.355 kb on - strand, within CA264_12660 at 2955.361 kb on + strand, within CA264_12660 at 2955.362 kb on - strand, within CA264_12660 at 2955.479 kb on + strand, within CA264_12660 at 2955.480 kb on - strand, within CA264_12660 at 2955.486 kb on + strand, within CA264_12660 at 2955.487 kb on - strand, within CA264_12660 at 2955.571 kb on - strand, within CA264_12660 at 2955.584 kb on + strand, within CA264_12660 at 2955.665 kb on + strand, within CA264_12660 at 2955.666 kb on - strand, within CA264_12660 at 2955.668 kb on + strand, within CA264_12660 at 2955.669 kb on - strand, within CA264_12660 at 2955.669 kb on - strand, within CA264_12660 at 2955.670 kb on + strand, within CA264_12660 at 2955.670 kb on + strand, within CA264_12660 at 2955.671 kb on - strand, within CA264_12660 at 2955.671 kb on - strand, within CA264_12660 at 2955.710 kb on - strand, within CA264_12660 at 2955.712 kb on - strand, within CA264_12660 at 2955.715 kb on + strand, within CA264_12660 at 2955.715 kb on + strand, within CA264_12660 at 2955.716 kb on - strand, within CA264_12660 at 2955.716 kb on - strand, within CA264_12660 at 2955.727 kb on + strand, within CA264_12660 at 2955.746 kb on + strand, within CA264_12660 at 2955.746 kb on + strand, within CA264_12660 at 2955.746 kb on + strand, within CA264_12660 at 2955.816 kb on - strand, within CA264_12660 at 2955.827 kb on - strand, within CA264_12660 at 2955.947 kb on + strand, within CA264_12660 at 2955.948 kb on - strand, within CA264_12660 at 2956.025 kb on - strand at 2956.036 kb on + strand at 2956.084 kb on + strand at 2956.085 kb on - strand at 2956.091 kb on - strand at 2956.102 kb on + strand at 2956.189 kb on + strand, within CA264_12665 at 2956.190 kb on - strand, within CA264_12665 at 2956.254 kb on - strand, within CA264_12665 at 2956.300 kb on + strand, within CA264_12665 at 2956.301 kb on - strand, within CA264_12665 at 2956.301 kb on - strand, within CA264_12665 at 2956.316 kb on - strand, within CA264_12665 at 2956.405 kb on + strand, within CA264_12665 at 2956.654 kb on + strand, within CA264_12665 at 2956.654 kb on + strand, within CA264_12665 at 2956.654 kb on + strand, within CA264_12665 at 2956.726 kb on - strand at 2956.782 kb on - strand at 2956.845 kb on - strand at 2956.857 kb on + strand at 2956.858 kb on - strand at 2956.860 kb on - strand at 2956.923 kb on + strand at 2956.925 kb on + strand at 2956.925 kb on + strand at 2956.996 kb on + strand, within CA264_12670 at 2956.997 kb on - strand, within CA264_12670 at 2957.049 kb on + strand, within CA264_12670 at 2957.050 kb on - strand, within CA264_12670 at 2957.078 kb on + strand, within CA264_12670 at 2957.084 kb on + strand, within CA264_12670 at 2957.086 kb on + strand, within CA264_12670 at 2957.086 kb on + strand, within CA264_12670 at 2957.165 kb on + strand, within CA264_12670 at 2957.276 kb on - strand, within CA264_12670 at 2957.294 kb on - strand, within CA264_12670 at 2957.294 kb on - strand, within CA264_12670 at 2957.379 kb on - strand, within CA264_12670 at 2957.450 kb on - strand, within CA264_12670 at 2957.505 kb on - strand, within CA264_12670 at 2957.505 kb on - strand, within CA264_12670 at 2957.505 kb on - strand, within CA264_12670 at 2957.574 kb on - strand at 2957.578 kb on + strand at 2957.579 kb on - strand at 2957.579 kb on - strand at 2957.582 kb on + strand at 2957.582 kb on + strand at 2957.590 kb on - strand at 2957.645 kb on - strand at 2957.646 kb on + strand at 2957.647 kb on - strand at 2957.691 kb on - strand, within CA264_12675 at 2957.705 kb on + strand, within CA264_12675
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 2,955,150 - CA264_12660 0.11 +0.8 2,955,153 - CA264_12660 0.11 -0.8 2,955,170 + CA264_12660 0.13 +1.4 2,955,170 + CA264_12660 0.13 +0.2 2,955,172 + CA264_12660 0.13 +1.1 2,955,208 + CA264_12660 0.16 +0.9 2,955,208 + CA264_12660 0.16 +0.1 2,955,208 + CA264_12660 0.16 -0.1 2,955,209 - CA264_12660 0.17 -0.0 2,955,209 - CA264_12660 0.17 -0.1 2,955,209 - CA264_12660 0.17 +0.2 2,955,355 - CA264_12660 0.30 -0.1 2,955,361 + CA264_12660 0.31 +1.0 2,955,362 - CA264_12660 0.31 +0.7 2,955,479 + CA264_12660 0.42 -0.4 2,955,480 - CA264_12660 0.42 -0.0 2,955,486 + CA264_12660 0.43 +0.3 2,955,487 - CA264_12660 0.43 -0.3 2,955,571 - CA264_12660 0.50 +0.6 2,955,584 + CA264_12660 0.52 +0.5 2,955,665 + CA264_12660 0.59 -0.0 2,955,666 - CA264_12660 0.59 -0.3 2,955,668 + CA264_12660 0.60 +0.5 2,955,669 - CA264_12660 0.60 +0.3 2,955,669 - CA264_12660 0.60 +0.6 2,955,670 + CA264_12660 0.60 +0.3 2,955,670 + CA264_12660 0.60 -0.1 2,955,671 - CA264_12660 0.60 -0.8 2,955,671 - CA264_12660 0.60 +0.6 2,955,710 - CA264_12660 0.63 -0.4 2,955,712 - CA264_12660 0.64 +0.8 2,955,715 + CA264_12660 0.64 +0.6 2,955,715 + CA264_12660 0.64 +0.5 2,955,716 - CA264_12660 0.64 +0.8 2,955,716 - CA264_12660 0.64 +0.5 2,955,727 + CA264_12660 0.65 -1.2 2,955,746 + CA264_12660 0.67 -0.3 2,955,746 + CA264_12660 0.67 +0.2 2,955,746 + CA264_12660 0.67 -0.0 2,955,816 - CA264_12660 0.73 +0.5 2,955,827 - CA264_12660 0.74 +0.7 2,955,947 + CA264_12660 0.86 +0.5 2,955,948 - CA264_12660 0.86 -0.3 2,956,025 - +0.7 2,956,036 + -0.3 2,956,084 + +0.3 2,956,085 - -1.6 2,956,091 - -1.0 2,956,102 + -0.4 2,956,189 + CA264_12665 0.15 +1.5 2,956,190 - CA264_12665 0.16 -0.3 2,956,254 - CA264_12665 0.25 +0.4 2,956,300 + CA264_12665 0.32 -0.4 2,956,301 - CA264_12665 0.32 +0.1 2,956,301 - CA264_12665 0.32 -0.5 2,956,316 - CA264_12665 0.34 -0.1 2,956,405 + CA264_12665 0.47 +0.2 2,956,654 + CA264_12665 0.83 -1.0 2,956,654 + CA264_12665 0.83 +0.4 2,956,654 + CA264_12665 0.83 -0.2 2,956,726 - +1.1 2,956,782 - +0.1 2,956,845 - -0.9 2,956,857 + -0.8 2,956,858 - -0.5 2,956,860 - -0.8 2,956,923 + +0.6 2,956,925 + -0.9 2,956,925 + -0.5 2,956,996 + CA264_12670 0.16 +1.4 2,956,997 - CA264_12670 0.16 -1.5 2,957,049 + CA264_12670 0.23 +0.3 2,957,050 - CA264_12670 0.23 -0.1 2,957,078 + CA264_12670 0.27 +0.3 2,957,084 + CA264_12670 0.28 -0.5 2,957,086 + CA264_12670 0.28 -0.2 2,957,086 + CA264_12670 0.28 -0.4 2,957,165 + CA264_12670 0.38 -0.2 2,957,276 - CA264_12670 0.53 +0.6 2,957,294 - CA264_12670 0.55 +0.8 2,957,294 - CA264_12670 0.55 +1.8 2,957,379 - CA264_12670 0.66 -0.2 2,957,450 - CA264_12670 0.76 -0.4 2,957,505 - CA264_12670 0.83 -0.1 2,957,505 - CA264_12670 0.83 +0.4 2,957,505 - CA264_12670 0.83 -0.1 2,957,574 - -0.0 2,957,578 + +0.2 2,957,579 - +0.0 2,957,579 - +0.2 2,957,582 + -0.3 2,957,582 + -0.7 2,957,590 - -0.2 2,957,645 - +1.4 2,957,646 + +0.1 2,957,647 - -1.0 2,957,691 - CA264_12675 0.11 +0.0 2,957,705 + CA264_12675 0.13 -0.1
Or see this region's nucleotide sequence