Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12305 and CA264_12310 are separated by 5 nucleotides CA264_12310 and CA264_12315 are separated by 204 nucleotides CA264_12315 and CA264_12320 are separated by 41 nucleotides
CA264_12305: CA264_12305 - MRP family ATP-binding protein, at 2,867,485 to 2,868,588
_12305
CA264_12310: CA264_12310 - NifU family protein, at 2,868,594 to 2,868,863
_12310
CA264_12315: CA264_12315 - fumarylacetoacetase, at 2,869,068 to 2,870,339
_12315
CA264_12320: CA264_12320 - flavin reductase, at 2,870,381 to 2,871,286
_12320
Position (kb)
2869
2870
2871 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2868.579 kb on + strand at 2868.592 kb on - strand at 2868.704 kb on - strand, within CA264_12310 at 2868.704 kb on - strand, within CA264_12310 at 2868.878 kb on + strand at 2868.879 kb on - strand at 2868.883 kb on + strand at 2868.884 kb on - strand at 2868.884 kb on - strand at 2868.899 kb on + strand at 2868.928 kb on + strand at 2869.012 kb on - strand at 2869.041 kb on + strand at 2869.042 kb on - strand at 2869.072 kb on + strand at 2869.072 kb on + strand at 2869.111 kb on + strand at 2869.111 kb on + strand at 2869.111 kb on + strand at 2869.206 kb on + strand, within CA264_12315 at 2869.207 kb on - strand, within CA264_12315 at 2869.207 kb on - strand, within CA264_12315 at 2869.255 kb on + strand, within CA264_12315 at 2869.448 kb on - strand, within CA264_12315 at 2869.524 kb on - strand, within CA264_12315 at 2869.567 kb on - strand, within CA264_12315 at 2869.609 kb on + strand, within CA264_12315 at 2869.610 kb on - strand, within CA264_12315 at 2869.763 kb on + strand, within CA264_12315 at 2869.822 kb on - strand, within CA264_12315 at 2869.913 kb on - strand, within CA264_12315 at 2869.948 kb on - strand, within CA264_12315 at 2869.969 kb on - strand, within CA264_12315 at 2869.975 kb on - strand, within CA264_12315 at 2870.044 kb on - strand, within CA264_12315 at 2870.052 kb on - strand, within CA264_12315 at 2870.124 kb on + strand, within CA264_12315 at 2870.124 kb on + strand, within CA264_12315 at 2870.183 kb on + strand, within CA264_12315 at 2870.338 kb on - strand at 2870.369 kb on + strand at 2870.436 kb on + strand at 2870.436 kb on + strand at 2870.528 kb on - strand, within CA264_12320 at 2870.686 kb on + strand, within CA264_12320 at 2870.687 kb on - strand, within CA264_12320 at 2870.687 kb on - strand, within CA264_12320 at 2870.693 kb on + strand, within CA264_12320 at 2870.693 kb on + strand, within CA264_12320 at 2870.717 kb on - strand, within CA264_12320 at 2870.918 kb on + strand, within CA264_12320 at 2871.018 kb on + strand, within CA264_12320 at 2871.155 kb on + strand, within CA264_12320 at 2871.156 kb on - strand, within CA264_12320 at 2871.171 kb on - strand, within CA264_12320 at 2871.171 kb on - strand, within CA264_12320 at 2871.171 kb on - strand, within CA264_12320 at 2871.285 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 2,868,579 + -1.3 2,868,592 - -2.4 2,868,704 - CA264_12310 0.41 -2.8 2,868,704 - CA264_12310 0.41 -1.8 2,868,878 + -1.0 2,868,879 - -0.6 2,868,883 + -0.0 2,868,884 - +0.2 2,868,884 - -1.8 2,868,899 + +0.0 2,868,928 + -0.8 2,869,012 - -0.7 2,869,041 + -0.3 2,869,042 - +0.4 2,869,072 + -1.1 2,869,072 + +0.5 2,869,111 + -0.3 2,869,111 + -0.1 2,869,111 + -0.1 2,869,206 + CA264_12315 0.11 +0.1 2,869,207 - CA264_12315 0.11 -0.2 2,869,207 - CA264_12315 0.11 +0.2 2,869,255 + CA264_12315 0.15 +1.4 2,869,448 - CA264_12315 0.30 -1.9 2,869,524 - CA264_12315 0.36 +0.8 2,869,567 - CA264_12315 0.39 -0.3 2,869,609 + CA264_12315 0.43 +0.1 2,869,610 - CA264_12315 0.43 -0.8 2,869,763 + CA264_12315 0.55 +1.0 2,869,822 - CA264_12315 0.59 -1.9 2,869,913 - CA264_12315 0.66 -0.4 2,869,948 - CA264_12315 0.69 +0.8 2,869,969 - CA264_12315 0.71 -1.5 2,869,975 - CA264_12315 0.71 -0.3 2,870,044 - CA264_12315 0.77 -0.0 2,870,052 - CA264_12315 0.77 +0.0 2,870,124 + CA264_12315 0.83 +1.0 2,870,124 + CA264_12315 0.83 -0.3 2,870,183 + CA264_12315 0.88 +0.2 2,870,338 - -0.6 2,870,369 + -0.3 2,870,436 + +0.1 2,870,436 + -0.3 2,870,528 - CA264_12320 0.16 +0.7 2,870,686 + CA264_12320 0.34 +0.6 2,870,687 - CA264_12320 0.34 +0.0 2,870,687 - CA264_12320 0.34 +2.0 2,870,693 + CA264_12320 0.34 +0.4 2,870,693 + CA264_12320 0.34 -1.0 2,870,717 - CA264_12320 0.37 +0.5 2,870,918 + CA264_12320 0.59 +0.1 2,871,018 + CA264_12320 0.70 -0.3 2,871,155 + CA264_12320 0.85 -0.6 2,871,156 - CA264_12320 0.86 -0.7 2,871,171 - CA264_12320 0.87 -0.6 2,871,171 - CA264_12320 0.87 +0.2 2,871,171 - CA264_12320 0.87 -0.2 2,871,285 - -0.3
Or see this region's nucleotide sequence