Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11405 and CA264_11410 are separated by 57 nucleotides CA264_11410 and CA264_11415 overlap by 8 nucleotides
CA264_11405: CA264_11405 - glycerophosphodiester phosphodiesterase, at 2,643,199 to 2,644,098
_11405
CA264_11410: CA264_11410 - histidine phosphatase family protein, at 2,644,156 to 2,644,755
_11410
CA264_11415: CA264_11415 - carbohydrate kinase, at 2,644,748 to 2,646,208
_11415
Position (kb)
2644
2645 Strain fitness (log2 ratio)
-2
-1
0
1 at 2643.236 kb on + strand at 2643.236 kb on + strand at 2643.353 kb on + strand, within CA264_11405 at 2643.353 kb on + strand, within CA264_11405 at 2643.353 kb on + strand, within CA264_11405 at 2643.353 kb on + strand, within CA264_11405 at 2643.353 kb on + strand, within CA264_11405 at 2643.354 kb on - strand, within CA264_11405 at 2643.354 kb on - strand, within CA264_11405 at 2643.407 kb on + strand, within CA264_11405 at 2643.407 kb on + strand, within CA264_11405 at 2643.408 kb on - strand, within CA264_11405 at 2643.408 kb on - strand, within CA264_11405 at 2643.408 kb on - strand, within CA264_11405 at 2643.408 kb on - strand, within CA264_11405 at 2643.447 kb on - strand, within CA264_11405 at 2643.486 kb on - strand, within CA264_11405 at 2643.551 kb on + strand, within CA264_11405 at 2643.594 kb on - strand, within CA264_11405 at 2643.691 kb on + strand, within CA264_11405 at 2643.692 kb on - strand, within CA264_11405 at 2643.694 kb on + strand, within CA264_11405 at 2643.779 kb on + strand, within CA264_11405 at 2643.811 kb on - strand, within CA264_11405 at 2643.871 kb on + strand, within CA264_11405 at 2643.903 kb on + strand, within CA264_11405 at 2643.903 kb on + strand, within CA264_11405 at 2643.904 kb on - strand, within CA264_11405 at 2643.925 kb on - strand, within CA264_11405 at 2643.989 kb on + strand, within CA264_11405 at 2643.999 kb on - strand, within CA264_11405 at 2644.044 kb on + strand at 2644.058 kb on - strand at 2644.105 kb on + strand at 2644.132 kb on + strand at 2644.133 kb on - strand at 2644.209 kb on + strand at 2644.210 kb on - strand at 2644.286 kb on + strand, within CA264_11410 at 2644.287 kb on - strand, within CA264_11410 at 2644.321 kb on + strand, within CA264_11410 at 2644.327 kb on - strand, within CA264_11410 at 2644.378 kb on + strand, within CA264_11410 at 2644.378 kb on + strand, within CA264_11410 at 2644.378 kb on + strand, within CA264_11410 at 2644.381 kb on - strand, within CA264_11410 at 2644.381 kb on - strand, within CA264_11410 at 2644.562 kb on + strand, within CA264_11410 at 2644.563 kb on - strand, within CA264_11410 at 2644.563 kb on - strand, within CA264_11410 at 2644.598 kb on + strand, within CA264_11410 at 2644.598 kb on + strand, within CA264_11410 at 2644.599 kb on - strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.694 kb on + strand, within CA264_11410 at 2644.695 kb on - strand, within CA264_11410 at 2644.695 kb on - strand, within CA264_11410 at 2644.739 kb on - strand at 2644.755 kb on + strand at 2644.762 kb on - strand at 2644.772 kb on + strand at 2644.772 kb on + strand at 2644.772 kb on + strand at 2644.773 kb on - strand at 2644.775 kb on - strand at 2644.775 kb on - strand at 2644.775 kb on - strand at 2644.776 kb on + strand at 2644.792 kb on + strand at 2644.866 kb on - strand at 2644.892 kb on + strand at 2644.903 kb on + strand, within CA264_11415 at 2644.903 kb on + strand, within CA264_11415 at 2644.903 kb on + strand, within CA264_11415 at 2644.904 kb on - strand, within CA264_11415 at 2644.904 kb on - strand, within CA264_11415 at 2644.905 kb on + strand, within CA264_11415 at 2644.905 kb on + strand, within CA264_11415 at 2644.925 kb on + strand, within CA264_11415 at 2644.926 kb on - strand, within CA264_11415 at 2645.041 kb on - strand, within CA264_11415 at 2645.066 kb on + strand, within CA264_11415 at 2645.104 kb on - strand, within CA264_11415 at 2645.108 kb on + strand, within CA264_11415 at 2645.108 kb on + strand, within CA264_11415 at 2645.122 kb on + strand, within CA264_11415 at 2645.169 kb on - strand, within CA264_11415 at 2645.185 kb on + strand, within CA264_11415 at 2645.185 kb on + strand, within CA264_11415 at 2645.228 kb on + strand, within CA264_11415 at 2645.237 kb on - strand, within CA264_11415 at 2645.298 kb on - strand, within CA264_11415 at 2645.365 kb on - strand, within CA264_11415 at 2645.384 kb on + strand, within CA264_11415 at 2645.385 kb on - strand, within CA264_11415 at 2645.557 kb on + strand, within CA264_11415 at 2645.557 kb on + strand, within CA264_11415 at 2645.558 kb on - strand, within CA264_11415 at 2645.558 kb on - strand, within CA264_11415 at 2645.661 kb on + strand, within CA264_11415 at 2645.693 kb on + strand, within CA264_11415 at 2645.695 kb on + strand, within CA264_11415 at 2645.695 kb on + strand, within CA264_11415 at 2645.695 kb on + strand, within CA264_11415 at 2645.711 kb on + strand, within CA264_11415 at 2645.712 kb on - strand, within CA264_11415 at 2645.712 kb on - strand, within CA264_11415 at 2645.712 kb on - strand, within CA264_11415 at 2645.728 kb on - strand, within CA264_11415
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 2,643,236 + -2.3 2,643,236 + +1.1 2,643,353 + CA264_11405 0.17 -0.2 2,643,353 + CA264_11405 0.17 +0.1 2,643,353 + CA264_11405 0.17 -0.3 2,643,353 + CA264_11405 0.17 -0.6 2,643,353 + CA264_11405 0.17 -0.1 2,643,354 - CA264_11405 0.17 -0.2 2,643,354 - CA264_11405 0.17 -0.2 2,643,407 + CA264_11405 0.23 +0.3 2,643,407 + CA264_11405 0.23 +1.2 2,643,408 - CA264_11405 0.23 -0.1 2,643,408 - CA264_11405 0.23 -0.0 2,643,408 - CA264_11405 0.23 -0.3 2,643,408 - CA264_11405 0.23 -0.4 2,643,447 - CA264_11405 0.28 -0.4 2,643,486 - CA264_11405 0.32 +0.3 2,643,551 + CA264_11405 0.39 -0.1 2,643,594 - CA264_11405 0.44 -0.1 2,643,691 + CA264_11405 0.55 -0.8 2,643,692 - CA264_11405 0.55 -0.9 2,643,694 + CA264_11405 0.55 -0.5 2,643,779 + CA264_11405 0.64 -0.2 2,643,811 - CA264_11405 0.68 -0.1 2,643,871 + CA264_11405 0.75 +0.3 2,643,903 + CA264_11405 0.78 -0.0 2,643,903 + CA264_11405 0.78 +0.6 2,643,904 - CA264_11405 0.78 -0.3 2,643,925 - CA264_11405 0.81 -0.7 2,643,989 + CA264_11405 0.88 -0.1 2,643,999 - CA264_11405 0.89 +0.1 2,644,044 + +0.1 2,644,058 - +0.4 2,644,105 + -0.2 2,644,132 + -0.4 2,644,133 - -0.1 2,644,209 + -0.6 2,644,210 - -0.5 2,644,286 + CA264_11410 0.22 -0.5 2,644,287 - CA264_11410 0.22 -0.5 2,644,321 + CA264_11410 0.28 +0.1 2,644,327 - CA264_11410 0.28 +0.2 2,644,378 + CA264_11410 0.37 -0.4 2,644,378 + CA264_11410 0.37 +0.1 2,644,378 + CA264_11410 0.37 -0.2 2,644,381 - CA264_11410 0.38 -1.1 2,644,381 - CA264_11410 0.38 -0.8 2,644,562 + CA264_11410 0.68 -0.3 2,644,563 - CA264_11410 0.68 -0.1 2,644,563 - CA264_11410 0.68 -0.5 2,644,598 + CA264_11410 0.74 -0.5 2,644,598 + CA264_11410 0.74 -0.9 2,644,599 - CA264_11410 0.74 -0.6 2,644,600 + CA264_11410 0.74 -0.2 2,644,600 + CA264_11410 0.74 +0.0 2,644,600 + CA264_11410 0.74 -0.1 2,644,600 + CA264_11410 0.74 +0.4 2,644,601 - CA264_11410 0.74 -0.8 2,644,601 - CA264_11410 0.74 +0.7 2,644,601 - CA264_11410 0.74 -0.7 2,644,601 - CA264_11410 0.74 -0.5 2,644,694 + CA264_11410 0.90 -0.4 2,644,695 - CA264_11410 0.90 -0.6 2,644,695 - CA264_11410 0.90 -0.6 2,644,739 - -0.1 2,644,755 + -0.2 2,644,762 - -0.2 2,644,772 + -0.5 2,644,772 + +0.3 2,644,772 + -0.6 2,644,773 - -0.1 2,644,775 - -0.3 2,644,775 - -0.3 2,644,775 - +0.2 2,644,776 + +0.0 2,644,792 + -0.8 2,644,866 - +1.7 2,644,892 + +0.6 2,644,903 + CA264_11415 0.11 -0.3 2,644,903 + CA264_11415 0.11 +0.4 2,644,903 + CA264_11415 0.11 -0.1 2,644,904 - CA264_11415 0.11 -1.9 2,644,904 - CA264_11415 0.11 -1.1 2,644,905 + CA264_11415 0.11 +0.1 2,644,905 + CA264_11415 0.11 -0.9 2,644,925 + CA264_11415 0.12 -2.2 2,644,926 - CA264_11415 0.12 +0.8 2,645,041 - CA264_11415 0.20 -0.9 2,645,066 + CA264_11415 0.22 -0.3 2,645,104 - CA264_11415 0.24 -0.3 2,645,108 + CA264_11415 0.25 +0.2 2,645,108 + CA264_11415 0.25 +0.6 2,645,122 + CA264_11415 0.26 -0.6 2,645,169 - CA264_11415 0.29 -0.3 2,645,185 + CA264_11415 0.30 -0.1 2,645,185 + CA264_11415 0.30 -0.2 2,645,228 + CA264_11415 0.33 -1.4 2,645,237 - CA264_11415 0.33 +0.5 2,645,298 - CA264_11415 0.38 +0.6 2,645,365 - CA264_11415 0.42 -1.1 2,645,384 + CA264_11415 0.44 +0.2 2,645,385 - CA264_11415 0.44 -1.0 2,645,557 + CA264_11415 0.55 -0.2 2,645,557 + CA264_11415 0.55 -0.1 2,645,558 - CA264_11415 0.55 -0.1 2,645,558 - CA264_11415 0.55 +0.3 2,645,661 + CA264_11415 0.62 -0.8 2,645,693 + CA264_11415 0.65 +0.4 2,645,695 + CA264_11415 0.65 +0.5 2,645,695 + CA264_11415 0.65 -0.0 2,645,695 + CA264_11415 0.65 -0.4 2,645,711 + CA264_11415 0.66 +0.2 2,645,712 - CA264_11415 0.66 +0.2 2,645,712 - CA264_11415 0.66 -0.4 2,645,712 - CA264_11415 0.66 -2.5 2,645,728 - CA264_11415 0.67 +0.3
Or see this region's nucleotide sequence