Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10480 and CA264_10485 are separated by 86 nucleotides CA264_10485 and CA264_10490 are separated by 286 nucleotides CA264_10490 and CA264_10495 overlap by 4 nucleotides
CA264_10480: CA264_10480 - AI-2E family transporter, at 2,430,230 to 2,431,405
_10480
CA264_10485: CA264_10485 - lipoprotein-releasing system ATP-binding protein LolD, at 2,431,492 to 2,432,145
_10485
CA264_10490: CA264_10490 - MobA-like protein, at 2,432,432 to 2,433,016
_10490
CA264_10495: CA264_10495 - alanine dehydrogenase, at 2,433,013 to 2,434,203
_10495
Position (kb)
2431
2432
2433 Strain fitness (log2 ratio)
-2
-1
0
1 at 2430.733 kb on + strand, within CA264_10480 at 2430.734 kb on - strand, within CA264_10480 at 2430.845 kb on + strand, within CA264_10480 at 2430.845 kb on + strand, within CA264_10480 at 2430.845 kb on + strand, within CA264_10480 at 2430.845 kb on + strand, within CA264_10480 at 2430.845 kb on + strand, within CA264_10480 at 2430.845 kb on + strand, within CA264_10480 at 2430.846 kb on - strand, within CA264_10480 at 2430.846 kb on - strand, within CA264_10480 at 2430.846 kb on - strand, within CA264_10480 at 2430.850 kb on + strand, within CA264_10480 at 2430.871 kb on - strand, within CA264_10480 at 2430.914 kb on - strand, within CA264_10480 at 2430.922 kb on + strand, within CA264_10480 at 2430.930 kb on + strand, within CA264_10480 at 2430.947 kb on + strand, within CA264_10480 at 2431.075 kb on - strand, within CA264_10480 at 2431.076 kb on + strand, within CA264_10480 at 2431.077 kb on - strand, within CA264_10480 at 2431.095 kb on + strand, within CA264_10480 at 2431.096 kb on - strand, within CA264_10480 at 2431.096 kb on - strand, within CA264_10480 at 2431.103 kb on + strand, within CA264_10480 at 2431.103 kb on + strand, within CA264_10480 at 2431.111 kb on + strand, within CA264_10480 at 2431.200 kb on + strand, within CA264_10480 at 2431.415 kb on + strand at 2431.415 kb on + strand at 2431.416 kb on - strand at 2431.421 kb on + strand at 2431.422 kb on - strand at 2431.469 kb on + strand at 2431.470 kb on - strand at 2431.470 kb on - strand at 2431.471 kb on + strand at 2431.472 kb on - strand at 2431.477 kb on - strand at 2432.144 kb on - strand at 2432.156 kb on - strand at 2432.164 kb on - strand at 2432.171 kb on + strand at 2432.171 kb on + strand at 2432.177 kb on + strand at 2432.177 kb on + strand at 2432.177 kb on + strand at 2432.178 kb on - strand at 2432.178 kb on - strand at 2432.202 kb on + strand at 2432.223 kb on - strand at 2432.223 kb on - strand at 2432.236 kb on + strand at 2432.236 kb on + strand at 2432.237 kb on - strand at 2432.251 kb on - strand at 2432.256 kb on + strand at 2432.256 kb on + strand at 2432.256 kb on + strand at 2432.256 kb on + strand at 2432.256 kb on + strand at 2432.257 kb on - strand at 2432.266 kb on + strand at 2432.267 kb on - strand at 2432.269 kb on - strand at 2432.269 kb on - strand at 2432.312 kb on - strand at 2432.314 kb on - strand at 2432.374 kb on - strand at 2432.377 kb on + strand at 2432.377 kb on + strand at 2432.377 kb on + strand at 2432.378 kb on - strand at 2432.378 kb on - strand at 2432.378 kb on - strand at 2432.378 kb on - strand at 2432.378 kb on - strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.380 kb on - strand at 2432.380 kb on - strand at 2432.380 kb on - strand at 2432.380 kb on - strand at 2432.380 kb on - strand at 2432.429 kb on - strand at 2432.434 kb on - strand at 2432.458 kb on + strand at 2432.477 kb on + strand at 2432.477 kb on + strand at 2432.478 kb on - strand at 2432.594 kb on - strand, within CA264_10490 at 2432.695 kb on + strand, within CA264_10490 at 2432.698 kb on - strand, within CA264_10490 at 2432.757 kb on + strand, within CA264_10490 at 2432.822 kb on + strand, within CA264_10490 at 2432.841 kb on + strand, within CA264_10490 at 2432.842 kb on - strand, within CA264_10490 at 2432.916 kb on - strand, within CA264_10490 at 2432.951 kb on + strand, within CA264_10490 at 2432.951 kb on + strand, within CA264_10490 at 2432.952 kb on - strand, within CA264_10490 at 2433.016 kb on + strand at 2433.091 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 2,430,733 + CA264_10480 0.43 +0.2 2,430,734 - CA264_10480 0.43 -2.1 2,430,845 + CA264_10480 0.52 -0.0 2,430,845 + CA264_10480 0.52 -0.4 2,430,845 + CA264_10480 0.52 +0.6 2,430,845 + CA264_10480 0.52 -1.0 2,430,845 + CA264_10480 0.52 -0.2 2,430,845 + CA264_10480 0.52 -0.0 2,430,846 - CA264_10480 0.52 -1.6 2,430,846 - CA264_10480 0.52 -0.9 2,430,846 - CA264_10480 0.52 -0.5 2,430,850 + CA264_10480 0.53 +0.5 2,430,871 - CA264_10480 0.55 -1.0 2,430,914 - CA264_10480 0.58 +1.7 2,430,922 + CA264_10480 0.59 -0.2 2,430,930 + CA264_10480 0.60 -0.5 2,430,947 + CA264_10480 0.61 -0.7 2,431,075 - CA264_10480 0.72 -2.7 2,431,076 + CA264_10480 0.72 +0.3 2,431,077 - CA264_10480 0.72 -0.6 2,431,095 + CA264_10480 0.74 +0.4 2,431,096 - CA264_10480 0.74 -0.5 2,431,096 - CA264_10480 0.74 -0.4 2,431,103 + CA264_10480 0.74 -0.3 2,431,103 + CA264_10480 0.74 -0.3 2,431,111 + CA264_10480 0.75 -0.2 2,431,200 + CA264_10480 0.82 -1.5 2,431,415 + +0.4 2,431,415 + +0.5 2,431,416 - -0.2 2,431,421 + -1.2 2,431,422 - +0.3 2,431,469 + +0.3 2,431,470 - -0.8 2,431,470 - +0.4 2,431,471 + -0.1 2,431,472 - -1.5 2,431,477 - -0.4 2,432,144 - +0.0 2,432,156 - +1.1 2,432,164 - -0.9 2,432,171 + -1.0 2,432,171 + +0.6 2,432,177 + -0.6 2,432,177 + -0.3 2,432,177 + -0.1 2,432,178 - +1.0 2,432,178 - +0.1 2,432,202 + -0.9 2,432,223 - +1.5 2,432,223 - -0.0 2,432,236 + +0.5 2,432,236 + +1.2 2,432,237 - -0.0 2,432,251 - +0.4 2,432,256 + -0.6 2,432,256 + -1.5 2,432,256 + -0.9 2,432,256 + +1.1 2,432,256 + -0.5 2,432,257 - -0.1 2,432,266 + -1.6 2,432,267 - +0.3 2,432,269 - -0.6 2,432,269 - +0.3 2,432,312 - +0.1 2,432,314 - -0.2 2,432,374 - -0.1 2,432,377 + -0.6 2,432,377 + +0.4 2,432,377 + +0.6 2,432,378 - +0.7 2,432,378 - -0.4 2,432,378 - +0.1 2,432,378 - -0.1 2,432,378 - -0.8 2,432,379 + -1.0 2,432,379 + -0.4 2,432,379 + +0.8 2,432,379 + -0.6 2,432,379 + -0.1 2,432,379 + +0.0 2,432,379 + +0.3 2,432,379 + -0.2 2,432,379 + +0.2 2,432,379 + +0.1 2,432,379 + -0.1 2,432,380 - +0.7 2,432,380 - +0.8 2,432,380 - +1.4 2,432,380 - +0.8 2,432,380 - -0.2 2,432,429 - -0.4 2,432,434 - -0.1 2,432,458 + +0.4 2,432,477 + -0.4 2,432,477 + +0.5 2,432,478 - +1.0 2,432,594 - CA264_10490 0.28 -0.4 2,432,695 + CA264_10490 0.45 +0.0 2,432,698 - CA264_10490 0.45 +0.3 2,432,757 + CA264_10490 0.56 -0.1 2,432,822 + CA264_10490 0.67 +0.0 2,432,841 + CA264_10490 0.70 -0.1 2,432,842 - CA264_10490 0.70 -0.6 2,432,916 - CA264_10490 0.83 -0.4 2,432,951 + CA264_10490 0.89 -0.4 2,432,951 + CA264_10490 0.89 -1.3 2,432,952 - CA264_10490 0.89 -0.8 2,433,016 + -0.6 2,433,091 + +0.8
Or see this region's nucleotide sequence