Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08735 and CA264_08740 are separated by 436 nucleotides CA264_08740 and CA264_08745 are separated by 255 nucleotides
CA264_08735: CA264_08735 - hypothetical protein, at 2,034,285 to 2,034,710
_08735
CA264_08740: CA264_08740 - serine hydrolase, at 2,035,147 to 2,038,173
_08740
CA264_08745: CA264_08745 - glycoside hydrolase, at 2,038,429 to 2,039,955
_08745
Position (kb)
2035
2036
2037
2038
2039 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2034.263 kb on + strand at 2034.263 kb on + strand at 2034.264 kb on - strand at 2034.265 kb on + strand at 2034.284 kb on - strand at 2034.284 kb on - strand at 2034.284 kb on - strand at 2034.286 kb on + strand at 2034.287 kb on - strand at 2034.358 kb on - strand, within CA264_08735 at 2034.385 kb on + strand, within CA264_08735 at 2034.421 kb on + strand, within CA264_08735 at 2034.517 kb on + strand, within CA264_08735 at 2034.517 kb on + strand, within CA264_08735 at 2034.517 kb on + strand, within CA264_08735 at 2034.527 kb on - strand, within CA264_08735 at 2034.633 kb on - strand, within CA264_08735 at 2034.640 kb on + strand, within CA264_08735 at 2034.641 kb on - strand, within CA264_08735 at 2034.641 kb on - strand, within CA264_08735 at 2034.643 kb on - strand, within CA264_08735 at 2034.643 kb on - strand, within CA264_08735 at 2034.643 kb on - strand, within CA264_08735 at 2034.643 kb on - strand, within CA264_08735 at 2034.643 kb on - strand, within CA264_08735 at 2034.652 kb on + strand, within CA264_08735 at 2034.674 kb on + strand at 2034.675 kb on - strand at 2034.689 kb on - strand at 2034.725 kb on - strand at 2034.828 kb on + strand at 2034.840 kb on + strand at 2034.840 kb on + strand at 2034.904 kb on - strand at 2034.904 kb on - strand at 2034.915 kb on + strand at 2034.916 kb on - strand at 2034.921 kb on + strand at 2034.937 kb on - strand at 2034.980 kb on + strand at 2034.980 kb on + strand at 2035.069 kb on + strand at 2035.070 kb on - strand at 2035.070 kb on - strand at 2035.129 kb on - strand at 2035.184 kb on + strand at 2035.184 kb on + strand at 2035.196 kb on - strand at 2035.270 kb on + strand at 2035.270 kb on + strand at 2035.270 kb on + strand at 2035.270 kb on + strand at 2035.271 kb on - strand at 2035.271 kb on - strand at 2035.271 kb on - strand at 2035.271 kb on - strand at 2035.271 kb on - strand at 2035.275 kb on - strand at 2035.306 kb on - strand at 2035.415 kb on + strand at 2035.415 kb on + strand at 2035.420 kb on - strand at 2035.420 kb on - strand at 2035.581 kb on + strand, within CA264_08740 at 2035.582 kb on - strand, within CA264_08740 at 2035.582 kb on - strand, within CA264_08740 at 2035.582 kb on - strand, within CA264_08740 at 2035.615 kb on + strand, within CA264_08740 at 2035.615 kb on + strand, within CA264_08740 at 2035.657 kb on - strand, within CA264_08740 at 2035.674 kb on - strand, within CA264_08740 at 2035.677 kb on + strand, within CA264_08740 at 2035.677 kb on + strand, within CA264_08740 at 2035.677 kb on + strand, within CA264_08740 at 2035.677 kb on + strand, within CA264_08740 at 2035.677 kb on + strand, within CA264_08740 at 2035.677 kb on + strand, within CA264_08740 at 2035.678 kb on - strand, within CA264_08740 at 2035.679 kb on + strand, within CA264_08740 at 2035.680 kb on - strand, within CA264_08740 at 2035.680 kb on - strand, within CA264_08740 at 2035.680 kb on - strand, within CA264_08740 at 2035.722 kb on + strand, within CA264_08740 at 2035.933 kb on - strand, within CA264_08740 at 2036.073 kb on - strand, within CA264_08740 at 2036.146 kb on + strand, within CA264_08740 at 2036.147 kb on - strand, within CA264_08740 at 2036.154 kb on + strand, within CA264_08740 at 2036.172 kb on - strand, within CA264_08740 at 2036.208 kb on - strand, within CA264_08740 at 2036.211 kb on + strand, within CA264_08740 at 2036.212 kb on - strand, within CA264_08740 at 2036.222 kb on + strand, within CA264_08740 at 2036.367 kb on - strand, within CA264_08740 at 2036.455 kb on + strand, within CA264_08740 at 2036.497 kb on - strand, within CA264_08740 at 2036.553 kb on + strand, within CA264_08740 at 2036.683 kb on + strand, within CA264_08740 at 2036.684 kb on - strand, within CA264_08740 at 2036.693 kb on - strand, within CA264_08740 at 2036.703 kb on + strand, within CA264_08740 at 2036.704 kb on - strand, within CA264_08740 at 2036.745 kb on + strand, within CA264_08740 at 2036.776 kb on + strand, within CA264_08740 at 2036.777 kb on - strand, within CA264_08740 at 2036.851 kb on - strand, within CA264_08740 at 2037.050 kb on - strand, within CA264_08740 at 2037.050 kb on - strand, within CA264_08740 at 2037.135 kb on + strand, within CA264_08740 at 2037.235 kb on - strand, within CA264_08740 at 2037.237 kb on - strand, within CA264_08740 at 2037.518 kb on + strand, within CA264_08740 at 2037.518 kb on + strand, within CA264_08740 at 2037.682 kb on - strand, within CA264_08740 at 2037.682 kb on - strand, within CA264_08740 at 2037.773 kb on - strand, within CA264_08740 at 2037.773 kb on - strand, within CA264_08740 at 2037.875 kb on + strand at 2037.875 kb on + strand at 2037.994 kb on + strand at 2038.045 kb on + strand at 2038.115 kb on - strand at 2038.157 kb on - strand at 2038.191 kb on + strand at 2038.191 kb on + strand at 2038.203 kb on + strand at 2038.204 kb on - strand at 2038.220 kb on + strand at 2038.220 kb on + strand at 2038.225 kb on - strand at 2038.244 kb on - strand at 2038.255 kb on - strand at 2038.345 kb on + strand at 2038.349 kb on + strand at 2038.350 kb on - strand at 2038.359 kb on + strand at 2038.360 kb on - strand at 2038.416 kb on + strand at 2038.417 kb on - strand at 2038.870 kb on - strand, within CA264_08745 at 2038.870 kb on - strand, within CA264_08745 at 2038.870 kb on - strand, within CA264_08745 at 2038.924 kb on - strand, within CA264_08745 at 2038.951 kb on + strand, within CA264_08745 at 2038.951 kb on + strand, within CA264_08745 at 2038.952 kb on - strand, within CA264_08745 at 2038.958 kb on + strand, within CA264_08745 at 2039.018 kb on - strand, within CA264_08745 at 2039.023 kb on + strand, within CA264_08745 at 2039.023 kb on + strand, within CA264_08745 at 2039.030 kb on - strand, within CA264_08745 at 2039.035 kb on - strand, within CA264_08745 at 2039.074 kb on + strand, within CA264_08745 at 2039.074 kb on + strand, within CA264_08745 at 2039.074 kb on + strand, within CA264_08745 at 2039.076 kb on + strand, within CA264_08745 at 2039.083 kb on - strand, within CA264_08745 at 2039.152 kb on - strand, within CA264_08745 at 2039.153 kb on + strand, within CA264_08745
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 2,034,263 + +2.7 2,034,263 + +0.4 2,034,264 - -0.4 2,034,265 + -0.4 2,034,284 - -1.5 2,034,284 - -0.3 2,034,284 - +0.3 2,034,286 + +0.0 2,034,287 - -0.5 2,034,358 - CA264_08735 0.17 -0.1 2,034,385 + CA264_08735 0.23 -0.8 2,034,421 + CA264_08735 0.32 -0.1 2,034,517 + CA264_08735 0.54 +0.4 2,034,517 + CA264_08735 0.54 -0.0 2,034,517 + CA264_08735 0.54 -1.9 2,034,527 - CA264_08735 0.57 -0.4 2,034,633 - CA264_08735 0.82 -0.5 2,034,640 + CA264_08735 0.83 +0.4 2,034,641 - CA264_08735 0.84 -0.9 2,034,641 - CA264_08735 0.84 -0.3 2,034,643 - CA264_08735 0.84 -0.6 2,034,643 - CA264_08735 0.84 +0.8 2,034,643 - CA264_08735 0.84 -0.6 2,034,643 - CA264_08735 0.84 -1.1 2,034,643 - CA264_08735 0.84 -0.9 2,034,652 + CA264_08735 0.86 -0.4 2,034,674 + +0.0 2,034,675 - +0.1 2,034,689 - -0.3 2,034,725 - +0.1 2,034,828 + +0.3 2,034,840 + -0.3 2,034,840 + +0.6 2,034,904 - +0.7 2,034,904 - +0.1 2,034,915 + +0.5 2,034,916 - -0.3 2,034,921 + +0.1 2,034,937 - +1.6 2,034,980 + -1.5 2,034,980 + +0.4 2,035,069 + -1.3 2,035,070 - +0.0 2,035,070 - +0.8 2,035,129 - -0.4 2,035,184 + -1.7 2,035,184 + +0.3 2,035,196 - -0.1 2,035,270 + +0.1 2,035,270 + -0.1 2,035,270 + +0.4 2,035,270 + -0.5 2,035,271 - -0.1 2,035,271 - -0.6 2,035,271 - +0.0 2,035,271 - +0.5 2,035,271 - -0.6 2,035,275 - -0.3 2,035,306 - -0.4 2,035,415 + +0.8 2,035,415 + +0.1 2,035,420 - -1.6 2,035,420 - -0.3 2,035,581 + CA264_08740 0.14 -0.9 2,035,582 - CA264_08740 0.14 +0.7 2,035,582 - CA264_08740 0.14 +0.3 2,035,582 - CA264_08740 0.14 -0.3 2,035,615 + CA264_08740 0.15 +0.2 2,035,615 + CA264_08740 0.15 -0.9 2,035,657 - CA264_08740 0.17 -0.0 2,035,674 - CA264_08740 0.17 -0.3 2,035,677 + CA264_08740 0.18 -1.3 2,035,677 + CA264_08740 0.18 +0.1 2,035,677 + CA264_08740 0.18 +0.1 2,035,677 + CA264_08740 0.18 +0.1 2,035,677 + CA264_08740 0.18 -0.8 2,035,677 + CA264_08740 0.18 +0.0 2,035,678 - CA264_08740 0.18 -0.4 2,035,679 + CA264_08740 0.18 +0.6 2,035,680 - CA264_08740 0.18 +0.1 2,035,680 - CA264_08740 0.18 -0.4 2,035,680 - CA264_08740 0.18 +0.5 2,035,722 + CA264_08740 0.19 -0.6 2,035,933 - CA264_08740 0.26 +0.1 2,036,073 - CA264_08740 0.31 +0.2 2,036,146 + CA264_08740 0.33 -0.2 2,036,147 - CA264_08740 0.33 -0.0 2,036,154 + CA264_08740 0.33 -0.0 2,036,172 - CA264_08740 0.34 +1.0 2,036,208 - CA264_08740 0.35 -0.0 2,036,211 + CA264_08740 0.35 +1.0 2,036,212 - CA264_08740 0.35 +1.7 2,036,222 + CA264_08740 0.36 -0.3 2,036,367 - CA264_08740 0.40 +0.4 2,036,455 + CA264_08740 0.43 +1.3 2,036,497 - CA264_08740 0.45 +0.1 2,036,553 + CA264_08740 0.46 -1.0 2,036,683 + CA264_08740 0.51 +0.1 2,036,684 - CA264_08740 0.51 -0.3 2,036,693 - CA264_08740 0.51 -0.7 2,036,703 + CA264_08740 0.51 -1.6 2,036,704 - CA264_08740 0.51 +1.3 2,036,745 + CA264_08740 0.53 +1.3 2,036,776 + CA264_08740 0.54 +0.3 2,036,777 - CA264_08740 0.54 +0.7 2,036,851 - CA264_08740 0.56 +0.1 2,037,050 - CA264_08740 0.63 -0.6 2,037,050 - CA264_08740 0.63 +0.3 2,037,135 + CA264_08740 0.66 -0.3 2,037,235 - CA264_08740 0.69 -0.6 2,037,237 - CA264_08740 0.69 -1.6 2,037,518 + CA264_08740 0.78 +1.1 2,037,518 + CA264_08740 0.78 +0.9 2,037,682 - CA264_08740 0.84 +0.5 2,037,682 - CA264_08740 0.84 +0.6 2,037,773 - CA264_08740 0.87 +0.2 2,037,773 - CA264_08740 0.87 -0.4 2,037,875 + -0.4 2,037,875 + +0.7 2,037,994 + -0.1 2,038,045 + -0.0 2,038,115 - +0.5 2,038,157 - -0.4 2,038,191 + -0.9 2,038,191 + -1.6 2,038,203 + +0.4 2,038,204 - +0.1 2,038,220 + +2.0 2,038,220 + +0.3 2,038,225 - -0.3 2,038,244 - -0.6 2,038,255 - -0.3 2,038,345 + -0.2 2,038,349 + +0.2 2,038,350 - -1.5 2,038,359 + +0.0 2,038,360 - +0.5 2,038,416 + -0.5 2,038,417 - +1.0 2,038,870 - CA264_08745 0.29 +0.4 2,038,870 - CA264_08745 0.29 -0.6 2,038,870 - CA264_08745 0.29 +0.1 2,038,924 - CA264_08745 0.32 -0.8 2,038,951 + CA264_08745 0.34 +0.2 2,038,951 + CA264_08745 0.34 -0.2 2,038,952 - CA264_08745 0.34 +0.0 2,038,958 + CA264_08745 0.35 +0.5 2,039,018 - CA264_08745 0.39 -0.5 2,039,023 + CA264_08745 0.39 +0.1 2,039,023 + CA264_08745 0.39 -0.1 2,039,030 - CA264_08745 0.39 -0.1 2,039,035 - CA264_08745 0.40 +0.7 2,039,074 + CA264_08745 0.42 +0.9 2,039,074 + CA264_08745 0.42 -0.3 2,039,074 + CA264_08745 0.42 +0.0 2,039,076 + CA264_08745 0.42 -2.1 2,039,083 - CA264_08745 0.43 +0.4 2,039,152 - CA264_08745 0.47 +0.6 2,039,153 + CA264_08745 0.47 -0.8
Or see this region's nucleotide sequence