Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07835 and CA264_07840 are separated by 206 nucleotides CA264_07840 and CA264_07845 are separated by 171 nucleotides
CA264_07835: CA264_07835 - RNA methyltransferase, at 1,814,148 to 1,815,323
_07835
CA264_07840: CA264_07840 - sodium:proline symporter, at 1,815,530 to 1,817,278
_07840
CA264_07845: CA264_07845 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 1,817,450 to 1,818,466
_07845
Position (kb)
1815
1816
1817
1818 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1814.790 kb on + strand, within CA264_07835 at 1814.790 kb on + strand, within CA264_07835 at 1814.790 kb on + strand, within CA264_07835 at 1814.791 kb on - strand, within CA264_07835 at 1814.791 kb on - strand, within CA264_07835 at 1814.791 kb on - strand, within CA264_07835 at 1814.791 kb on - strand, within CA264_07835 at 1814.856 kb on - strand, within CA264_07835 at 1814.980 kb on + strand, within CA264_07835 at 1814.980 kb on + strand, within CA264_07835 at 1814.999 kb on + strand, within CA264_07835 at 1815.337 kb on + strand at 1815.338 kb on - strand at 1815.448 kb on - strand at 1815.489 kb on + strand at 1815.490 kb on - strand at 1815.490 kb on - strand at 1815.581 kb on - strand at 1815.588 kb on + strand at 1815.598 kb on + strand at 1815.598 kb on + strand at 1815.599 kb on - strand at 1815.599 kb on - strand at 1815.599 kb on - strand at 1815.599 kb on - strand at 1815.599 kb on - strand at 1815.735 kb on + strand, within CA264_07840 at 1815.748 kb on + strand, within CA264_07840 at 1815.797 kb on - strand, within CA264_07840 at 1815.842 kb on - strand, within CA264_07840 at 1815.924 kb on + strand, within CA264_07840 at 1815.924 kb on + strand, within CA264_07840 at 1815.925 kb on - strand, within CA264_07840 at 1815.973 kb on + strand, within CA264_07840 at 1815.977 kb on - strand, within CA264_07840 at 1815.977 kb on - strand, within CA264_07840 at 1816.019 kb on + strand, within CA264_07840 at 1816.020 kb on - strand, within CA264_07840 at 1816.020 kb on - strand, within CA264_07840 at 1816.044 kb on + strand, within CA264_07840 at 1816.052 kb on + strand, within CA264_07840 at 1816.061 kb on - strand, within CA264_07840 at 1816.114 kb on + strand, within CA264_07840 at 1816.114 kb on + strand, within CA264_07840 at 1816.119 kb on + strand, within CA264_07840 at 1816.120 kb on - strand, within CA264_07840 at 1816.127 kb on - strand, within CA264_07840 at 1816.149 kb on + strand, within CA264_07840 at 1816.246 kb on - strand, within CA264_07840 at 1816.349 kb on - strand, within CA264_07840 at 1816.349 kb on - strand, within CA264_07840 at 1816.484 kb on - strand, within CA264_07840 at 1816.520 kb on - strand, within CA264_07840 at 1816.586 kb on + strand, within CA264_07840 at 1816.587 kb on - strand, within CA264_07840 at 1816.612 kb on + strand, within CA264_07840 at 1816.613 kb on - strand, within CA264_07840 at 1816.613 kb on - strand, within CA264_07840 at 1816.613 kb on - strand, within CA264_07840 at 1816.629 kb on - strand, within CA264_07840 at 1816.629 kb on - strand, within CA264_07840 at 1816.631 kb on - strand, within CA264_07840 at 1816.633 kb on + strand, within CA264_07840 at 1816.633 kb on + strand, within CA264_07840 at 1816.633 kb on + strand, within CA264_07840 at 1816.633 kb on + strand, within CA264_07840 at 1816.634 kb on - strand, within CA264_07840 at 1816.634 kb on - strand, within CA264_07840 at 1816.720 kb on + strand, within CA264_07840 at 1816.720 kb on + strand, within CA264_07840 at 1816.721 kb on - strand, within CA264_07840 at 1816.721 kb on - strand, within CA264_07840 at 1816.740 kb on + strand, within CA264_07840 at 1816.753 kb on + strand, within CA264_07840 at 1816.759 kb on + strand, within CA264_07840 at 1816.760 kb on - strand, within CA264_07840 at 1816.829 kb on + strand, within CA264_07840 at 1816.905 kb on - strand, within CA264_07840 at 1816.982 kb on + strand, within CA264_07840 at 1816.982 kb on + strand, within CA264_07840 at 1816.983 kb on - strand, within CA264_07840 at 1816.983 kb on - strand, within CA264_07840 at 1817.100 kb on + strand, within CA264_07840 at 1817.100 kb on + strand, within CA264_07840 at 1817.101 kb on - strand, within CA264_07840 at 1817.102 kb on + strand, within CA264_07840 at 1817.102 kb on + strand, within CA264_07840 at 1817.103 kb on - strand, within CA264_07840 at 1817.174 kb on - strand at 1817.187 kb on - strand at 1817.277 kb on - strand at 1817.293 kb on - strand at 1817.293 kb on - strand at 1817.297 kb on + strand at 1817.298 kb on - strand at 1817.349 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 1,814,790 + CA264_07835 0.55 -0.4 1,814,790 + CA264_07835 0.55 -0.3 1,814,790 + CA264_07835 0.55 +0.1 1,814,791 - CA264_07835 0.55 -0.3 1,814,791 - CA264_07835 0.55 +0.3 1,814,791 - CA264_07835 0.55 +1.4 1,814,791 - CA264_07835 0.55 -0.7 1,814,856 - CA264_07835 0.60 +0.2 1,814,980 + CA264_07835 0.71 -0.1 1,814,980 + CA264_07835 0.71 -0.5 1,814,999 + CA264_07835 0.72 -0.7 1,815,337 + +0.1 1,815,338 - +0.9 1,815,448 - -0.3 1,815,489 + -0.3 1,815,490 - -0.4 1,815,490 - +0.8 1,815,581 - -0.4 1,815,588 + -0.5 1,815,598 + +1.1 1,815,598 + +1.0 1,815,599 - -0.8 1,815,599 - -0.5 1,815,599 - -0.3 1,815,599 - -0.4 1,815,599 - +0.2 1,815,735 + CA264_07840 0.12 -0.0 1,815,748 + CA264_07840 0.12 -1.7 1,815,797 - CA264_07840 0.15 +0.6 1,815,842 - CA264_07840 0.18 -0.2 1,815,924 + CA264_07840 0.23 -2.2 1,815,924 + CA264_07840 0.23 -1.2 1,815,925 - CA264_07840 0.23 -2.1 1,815,973 + CA264_07840 0.25 +0.6 1,815,977 - CA264_07840 0.26 +0.1 1,815,977 - CA264_07840 0.26 -0.8 1,816,019 + CA264_07840 0.28 +1.1 1,816,020 - CA264_07840 0.28 -0.0 1,816,020 - CA264_07840 0.28 -0.4 1,816,044 + CA264_07840 0.29 +0.3 1,816,052 + CA264_07840 0.30 +0.8 1,816,061 - CA264_07840 0.30 -0.1 1,816,114 + CA264_07840 0.33 +1.1 1,816,114 + CA264_07840 0.33 +0.4 1,816,119 + CA264_07840 0.34 +0.0 1,816,120 - CA264_07840 0.34 +0.5 1,816,127 - CA264_07840 0.34 -0.1 1,816,149 + CA264_07840 0.35 -0.9 1,816,246 - CA264_07840 0.41 +0.8 1,816,349 - CA264_07840 0.47 +0.4 1,816,349 - CA264_07840 0.47 +0.5 1,816,484 - CA264_07840 0.55 -1.3 1,816,520 - CA264_07840 0.57 +1.6 1,816,586 + CA264_07840 0.60 -0.0 1,816,587 - CA264_07840 0.60 +0.1 1,816,612 + CA264_07840 0.62 -0.1 1,816,613 - CA264_07840 0.62 -0.2 1,816,613 - CA264_07840 0.62 +0.3 1,816,613 - CA264_07840 0.62 -0.2 1,816,629 - CA264_07840 0.63 +2.3 1,816,629 - CA264_07840 0.63 -0.2 1,816,631 - CA264_07840 0.63 -0.3 1,816,633 + CA264_07840 0.63 -1.4 1,816,633 + CA264_07840 0.63 +0.3 1,816,633 + CA264_07840 0.63 -0.0 1,816,633 + CA264_07840 0.63 -0.5 1,816,634 - CA264_07840 0.63 +0.9 1,816,634 - CA264_07840 0.63 -1.0 1,816,720 + CA264_07840 0.68 +0.8 1,816,720 + CA264_07840 0.68 -0.1 1,816,721 - CA264_07840 0.68 -0.6 1,816,721 - CA264_07840 0.68 -2.6 1,816,740 + CA264_07840 0.69 -0.4 1,816,753 + CA264_07840 0.70 -0.1 1,816,759 + CA264_07840 0.70 -1.7 1,816,760 - CA264_07840 0.70 -0.4 1,816,829 + CA264_07840 0.74 +1.0 1,816,905 - CA264_07840 0.79 +0.2 1,816,982 + CA264_07840 0.83 +0.1 1,816,982 + CA264_07840 0.83 +1.2 1,816,983 - CA264_07840 0.83 -0.2 1,816,983 - CA264_07840 0.83 +0.4 1,817,100 + CA264_07840 0.90 -0.0 1,817,100 + CA264_07840 0.90 -0.1 1,817,101 - CA264_07840 0.90 -0.0 1,817,102 + CA264_07840 0.90 +0.1 1,817,102 + CA264_07840 0.90 -0.0 1,817,103 - CA264_07840 0.90 +0.0 1,817,174 - -0.1 1,817,187 - -0.5 1,817,277 - -0.2 1,817,293 - -0.5 1,817,293 - +0.2 1,817,297 + -1.7 1,817,298 - -1.2 1,817,349 - -1.5
Or see this region's nucleotide sequence