Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07235

Experiment: m.b. perchlorate 100 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_07230 and CA264_07235 are separated by 692 nucleotidesCA264_07235 and CA264_07240 are separated by 127 nucleotidesCA264_07240 and CA264_07245 are separated by 225 nucleotides CA264_07230: CA264_07230 - hypothetical protein, at 1,669,374 to 1,669,754 _07230 CA264_07235: CA264_07235 - SIGNAL peptide protein, at 1,670,447 to 1,670,845 _07235 CA264_07240: CA264_07240 - hypothetical protein, at 1,670,973 to 1,671,440 _07240 CA264_07245: CA264_07245 - hypothetical protein, at 1,671,666 to 1,672,232 _07245 Position (kb) 1670 1671Strain fitness (log2 ratio) -1 0 1 2 3at 1669.554 kb on - strand, within CA264_07230at 1669.571 kb on + strand, within CA264_07230at 1669.571 kb on + strand, within CA264_07230at 1669.595 kb on - strand, within CA264_07230at 1669.607 kb on - strand, within CA264_07230at 1669.638 kb on + strand, within CA264_07230at 1669.639 kb on - strand, within CA264_07230at 1669.639 kb on - strand, within CA264_07230at 1669.642 kb on + strand, within CA264_07230at 1669.642 kb on + strand, within CA264_07230at 1669.642 kb on + strand, within CA264_07230at 1669.643 kb on - strand, within CA264_07230at 1669.643 kb on - strand, within CA264_07230at 1669.733 kb on + strandat 1669.733 kb on + strandat 1669.734 kb on - strandat 1669.737 kb on + strandat 1669.738 kb on - strandat 1669.738 kb on - strandat 1669.738 kb on - strandat 1669.739 kb on + strandat 1669.739 kb on + strandat 1669.740 kb on - strandat 1669.740 kb on - strandat 1669.872 kb on - strandat 1669.905 kb on + strandat 1669.905 kb on + strandat 1669.906 kb on - strandat 1669.929 kb on + strandat 1669.929 kb on + strandat 1669.944 kb on + strandat 1669.945 kb on - strandat 1669.958 kb on + strandat 1669.959 kb on - strandat 1669.962 kb on - strandat 1669.962 kb on - strandat 1669.989 kb on + strandat 1669.996 kb on + strandat 1669.996 kb on + strandat 1669.997 kb on - strandat 1670.002 kb on + strandat 1670.003 kb on - strandat 1670.003 kb on - strandat 1670.006 kb on - strandat 1670.022 kb on + strandat 1670.028 kb on + strandat 1670.028 kb on + strandat 1670.028 kb on + strandat 1670.029 kb on - strandat 1670.029 kb on - strandat 1670.029 kb on - strandat 1670.118 kb on + strandat 1670.119 kb on - strandat 1670.126 kb on + strandat 1670.126 kb on + strandat 1670.127 kb on - strandat 1670.127 kb on - strandat 1670.128 kb on + strandat 1670.128 kb on + strandat 1670.129 kb on - strandat 1670.129 kb on - strandat 1670.207 kb on + strandat 1670.237 kb on + strandat 1670.237 kb on + strandat 1670.245 kb on + strandat 1670.246 kb on - strandat 1670.356 kb on - strandat 1670.366 kb on + strandat 1670.377 kb on + strandat 1670.400 kb on + strandat 1670.430 kb on + strandat 1670.436 kb on + strandat 1670.436 kb on + strandat 1670.436 kb on + strandat 1670.437 kb on - strandat 1670.439 kb on + strandat 1670.534 kb on + strand, within CA264_07235at 1670.614 kb on + strand, within CA264_07235at 1670.665 kb on + strand, within CA264_07235at 1670.714 kb on - strand, within CA264_07235at 1670.714 kb on - strand, within CA264_07235at 1670.717 kb on + strand, within CA264_07235at 1670.717 kb on + strand, within CA264_07235at 1670.717 kb on + strand, within CA264_07235at 1670.718 kb on - strand, within CA264_07235at 1670.718 kb on - strand, within CA264_07235at 1670.741 kb on + strand, within CA264_07235at 1670.750 kb on + strand, within CA264_07235at 1670.750 kb on + strand, within CA264_07235at 1670.750 kb on + strand, within CA264_07235at 1670.750 kb on + strand, within CA264_07235at 1670.752 kb on + strand, within CA264_07235at 1670.753 kb on - strand, within CA264_07235at 1670.753 kb on - strand, within CA264_07235at 1670.753 kb on - strand, within CA264_07235at 1670.753 kb on - strand, within CA264_07235at 1670.773 kb on + strand, within CA264_07235at 1670.792 kb on + strand, within CA264_07235at 1670.793 kb on - strand, within CA264_07235at 1670.793 kb on - strand, within CA264_07235at 1670.844 kb on - strandat 1670.902 kb on + strandat 1670.910 kb on + strandat 1670.995 kb on + strandat 1670.995 kb on + strandat 1671.083 kb on - strand, within CA264_07240at 1671.130 kb on + strand, within CA264_07240at 1671.146 kb on + strand, within CA264_07240at 1671.147 kb on - strand, within CA264_07240at 1671.147 kb on - strand, within CA264_07240at 1671.168 kb on + strand, within CA264_07240at 1671.168 kb on + strand, within CA264_07240at 1671.169 kb on - strand, within CA264_07240at 1671.169 kb on - strand, within CA264_07240at 1671.247 kb on + strand, within CA264_07240at 1671.247 kb on + strand, within CA264_07240at 1671.247 kb on + strand, within CA264_07240at 1671.247 kb on + strand, within CA264_07240at 1671.248 kb on - strand, within CA264_07240at 1671.248 kb on - strand, within CA264_07240at 1671.278 kb on + strand, within CA264_07240at 1671.417 kb on + strandat 1671.472 kb on + strandat 1671.472 kb on + strandat 1671.473 kb on - strandat 1671.501 kb on + strandat 1671.588 kb on + strandat 1671.589 kb on - strandat 1671.644 kb on + strandat 1671.644 kb on + strandat 1671.760 kb on - strand, within CA264_07245at 1671.793 kb on - strand, within CA264_07245at 1671.793 kb on - strand, within CA264_07245

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM
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1,669,554 - CA264_07230 0.47 +0.2
1,669,571 + CA264_07230 0.52 +0.2
1,669,571 + CA264_07230 0.52 -0.2
1,669,595 - CA264_07230 0.58 +0.2
1,669,607 - CA264_07230 0.61 -1.1
1,669,638 + CA264_07230 0.69 -0.1
1,669,639 - CA264_07230 0.70 +0.1
1,669,639 - CA264_07230 0.70 +0.1
1,669,642 + CA264_07230 0.70 -1.5
1,669,642 + CA264_07230 0.70 +0.2
1,669,642 + CA264_07230 0.70 -0.2
1,669,643 - CA264_07230 0.71 -0.3
1,669,643 - CA264_07230 0.71 -0.1
1,669,733 + -1.7
1,669,733 + -1.0
1,669,734 - +0.1
1,669,737 + +1.8
1,669,738 - +0.0
1,669,738 - +0.3
1,669,738 - -0.1
1,669,739 + +0.5
1,669,739 + -0.1
1,669,740 - +0.3
1,669,740 - -0.3
1,669,872 - +0.3
1,669,905 + +0.0
1,669,905 + +0.5
1,669,906 - -0.2
1,669,929 + -0.0
1,669,929 + -1.6
1,669,944 + +2.3
1,669,945 - -0.3
1,669,958 + -0.0
1,669,959 - -0.1
1,669,962 - +0.2
1,669,962 - -0.2
1,669,989 + +0.1
1,669,996 + +0.1
1,669,996 + -0.1
1,669,997 - -0.4
1,670,002 + +0.0
1,670,003 - +0.1
1,670,003 - +0.2
1,670,006 - +0.1
1,670,022 + +0.2
1,670,028 + +0.6
1,670,028 + -0.2
1,670,028 + -1.6
1,670,029 - -0.5
1,670,029 - -1.2
1,670,029 - +0.3
1,670,118 + -1.5
1,670,119 - +0.5
1,670,126 + +0.2
1,670,126 + +2.0
1,670,127 - -0.2
1,670,127 - +0.0
1,670,128 + -0.3
1,670,128 + +0.4
1,670,129 - -0.9
1,670,129 - -0.2
1,670,207 + -0.1
1,670,237 + +0.7
1,670,237 + -1.0
1,670,245 + +0.1
1,670,246 - +0.5
1,670,356 - +0.3
1,670,366 + +0.0
1,670,377 + -0.6
1,670,400 + +0.4
1,670,430 + -0.1
1,670,436 + -1.0
1,670,436 + -0.1
1,670,436 + +0.1
1,670,437 - +0.4
1,670,439 + -0.5
1,670,534 + CA264_07235 0.22 +0.8
1,670,614 + CA264_07235 0.42 +0.9
1,670,665 + CA264_07235 0.55 -0.3
1,670,714 - CA264_07235 0.67 -0.8
1,670,714 - CA264_07235 0.67 +0.0
1,670,717 + CA264_07235 0.68 -0.4
1,670,717 + CA264_07235 0.68 -0.3
1,670,717 + CA264_07235 0.68 -0.6
1,670,718 - CA264_07235 0.68 -0.6
1,670,718 - CA264_07235 0.68 -0.3
1,670,741 + CA264_07235 0.74 -0.0
1,670,750 + CA264_07235 0.76 +2.0
1,670,750 + CA264_07235 0.76 +0.1
1,670,750 + CA264_07235 0.76 -0.3
1,670,750 + CA264_07235 0.76 -0.2
1,670,752 + CA264_07235 0.76 +0.0
1,670,753 - CA264_07235 0.77 +0.4
1,670,753 - CA264_07235 0.77 +1.2
1,670,753 - CA264_07235 0.77 +0.3
1,670,753 - CA264_07235 0.77 +0.1
1,670,773 + CA264_07235 0.82 +0.6
1,670,792 + CA264_07235 0.86 +1.4
1,670,793 - CA264_07235 0.87 +0.2
1,670,793 - CA264_07235 0.87 +0.1
1,670,844 - +0.5
1,670,902 + +0.3
1,670,910 + -0.8
1,670,995 + -0.5
1,670,995 + -1.0
1,671,083 - CA264_07240 0.24 +0.0
1,671,130 + CA264_07240 0.34 -0.5
1,671,146 + CA264_07240 0.37 -0.7
1,671,147 - CA264_07240 0.37 -1.0
1,671,147 - CA264_07240 0.37 -0.9
1,671,168 + CA264_07240 0.42 -1.2
1,671,168 + CA264_07240 0.42 -0.7
1,671,169 - CA264_07240 0.42 +0.0
1,671,169 - CA264_07240 0.42 +0.0
1,671,247 + CA264_07240 0.59 -0.1
1,671,247 + CA264_07240 0.59 -1.1
1,671,247 + CA264_07240 0.59 +0.9
1,671,247 + CA264_07240 0.59 +0.9
1,671,248 - CA264_07240 0.59 -0.0
1,671,248 - CA264_07240 0.59 -0.3
1,671,278 + CA264_07240 0.65 -0.9
1,671,417 + +2.8
1,671,472 + -0.7
1,671,472 + +0.4
1,671,473 - +0.8
1,671,501 + +0.5
1,671,588 + -0.1
1,671,589 - -0.5
1,671,644 + +1.4
1,671,644 + +1.5
1,671,760 - CA264_07245 0.17 +2.2
1,671,793 - CA264_07245 0.22 +1.9
1,671,793 - CA264_07245 0.22 +2.1

Or see this region's nucleotide sequence