Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07230 and CA264_07235 are separated by 692 nucleotides CA264_07235 and CA264_07240 are separated by 127 nucleotides CA264_07240 and CA264_07245 are separated by 225 nucleotides
CA264_07230: CA264_07230 - hypothetical protein, at 1,669,374 to 1,669,754
_07230
CA264_07235: CA264_07235 - SIGNAL peptide protein, at 1,670,447 to 1,670,845
_07235
CA264_07240: CA264_07240 - hypothetical protein, at 1,670,973 to 1,671,440
_07240
CA264_07245: CA264_07245 - hypothetical protein, at 1,671,666 to 1,672,232
_07245
Position (kb)
1670
1671 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1669.554 kb on - strand, within CA264_07230 at 1669.571 kb on + strand, within CA264_07230 at 1669.571 kb on + strand, within CA264_07230 at 1669.595 kb on - strand, within CA264_07230 at 1669.607 kb on - strand, within CA264_07230 at 1669.638 kb on + strand, within CA264_07230 at 1669.639 kb on - strand, within CA264_07230 at 1669.639 kb on - strand, within CA264_07230 at 1669.642 kb on + strand, within CA264_07230 at 1669.642 kb on + strand, within CA264_07230 at 1669.642 kb on + strand, within CA264_07230 at 1669.643 kb on - strand, within CA264_07230 at 1669.643 kb on - strand, within CA264_07230 at 1669.733 kb on + strand at 1669.733 kb on + strand at 1669.734 kb on - strand at 1669.737 kb on + strand at 1669.738 kb on - strand at 1669.738 kb on - strand at 1669.738 kb on - strand at 1669.739 kb on + strand at 1669.739 kb on + strand at 1669.740 kb on - strand at 1669.740 kb on - strand at 1669.872 kb on - strand at 1669.905 kb on + strand at 1669.905 kb on + strand at 1669.906 kb on - strand at 1669.929 kb on + strand at 1669.929 kb on + strand at 1669.944 kb on + strand at 1669.945 kb on - strand at 1669.958 kb on + strand at 1669.959 kb on - strand at 1669.962 kb on - strand at 1669.962 kb on - strand at 1669.989 kb on + strand at 1669.996 kb on + strand at 1669.996 kb on + strand at 1669.997 kb on - strand at 1670.002 kb on + strand at 1670.003 kb on - strand at 1670.003 kb on - strand at 1670.006 kb on - strand at 1670.022 kb on + strand at 1670.028 kb on + strand at 1670.028 kb on + strand at 1670.028 kb on + strand at 1670.029 kb on - strand at 1670.029 kb on - strand at 1670.029 kb on - strand at 1670.118 kb on + strand at 1670.119 kb on - strand at 1670.126 kb on + strand at 1670.126 kb on + strand at 1670.127 kb on - strand at 1670.127 kb on - strand at 1670.128 kb on + strand at 1670.128 kb on + strand at 1670.129 kb on - strand at 1670.129 kb on - strand at 1670.207 kb on + strand at 1670.237 kb on + strand at 1670.237 kb on + strand at 1670.245 kb on + strand at 1670.246 kb on - strand at 1670.356 kb on - strand at 1670.366 kb on + strand at 1670.377 kb on + strand at 1670.400 kb on + strand at 1670.430 kb on + strand at 1670.436 kb on + strand at 1670.436 kb on + strand at 1670.436 kb on + strand at 1670.437 kb on - strand at 1670.439 kb on + strand at 1670.534 kb on + strand, within CA264_07235 at 1670.614 kb on + strand, within CA264_07235 at 1670.665 kb on + strand, within CA264_07235 at 1670.714 kb on - strand, within CA264_07235 at 1670.714 kb on - strand, within CA264_07235 at 1670.717 kb on + strand, within CA264_07235 at 1670.717 kb on + strand, within CA264_07235 at 1670.717 kb on + strand, within CA264_07235 at 1670.718 kb on - strand, within CA264_07235 at 1670.718 kb on - strand, within CA264_07235 at 1670.741 kb on + strand, within CA264_07235 at 1670.750 kb on + strand, within CA264_07235 at 1670.750 kb on + strand, within CA264_07235 at 1670.750 kb on + strand, within CA264_07235 at 1670.750 kb on + strand, within CA264_07235 at 1670.752 kb on + strand, within CA264_07235 at 1670.753 kb on - strand, within CA264_07235 at 1670.753 kb on - strand, within CA264_07235 at 1670.753 kb on - strand, within CA264_07235 at 1670.753 kb on - strand, within CA264_07235 at 1670.773 kb on + strand, within CA264_07235 at 1670.792 kb on + strand, within CA264_07235 at 1670.793 kb on - strand, within CA264_07235 at 1670.793 kb on - strand, within CA264_07235 at 1670.844 kb on - strand at 1670.902 kb on + strand at 1670.910 kb on + strand at 1670.995 kb on + strand at 1670.995 kb on + strand at 1671.083 kb on - strand, within CA264_07240 at 1671.130 kb on + strand, within CA264_07240 at 1671.146 kb on + strand, within CA264_07240 at 1671.147 kb on - strand, within CA264_07240 at 1671.147 kb on - strand, within CA264_07240 at 1671.168 kb on + strand, within CA264_07240 at 1671.168 kb on + strand, within CA264_07240 at 1671.169 kb on - strand, within CA264_07240 at 1671.169 kb on - strand, within CA264_07240 at 1671.247 kb on + strand, within CA264_07240 at 1671.247 kb on + strand, within CA264_07240 at 1671.247 kb on + strand, within CA264_07240 at 1671.247 kb on + strand, within CA264_07240 at 1671.248 kb on - strand, within CA264_07240 at 1671.248 kb on - strand, within CA264_07240 at 1671.278 kb on + strand, within CA264_07240 at 1671.417 kb on + strand at 1671.472 kb on + strand at 1671.472 kb on + strand at 1671.473 kb on - strand at 1671.501 kb on + strand at 1671.588 kb on + strand at 1671.589 kb on - strand at 1671.644 kb on + strand at 1671.644 kb on + strand at 1671.760 kb on - strand, within CA264_07245 at 1671.793 kb on - strand, within CA264_07245 at 1671.793 kb on - strand, within CA264_07245
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 1,669,554 - CA264_07230 0.47 +0.2 1,669,571 + CA264_07230 0.52 +0.2 1,669,571 + CA264_07230 0.52 -0.2 1,669,595 - CA264_07230 0.58 +0.2 1,669,607 - CA264_07230 0.61 -1.1 1,669,638 + CA264_07230 0.69 -0.1 1,669,639 - CA264_07230 0.70 +0.1 1,669,639 - CA264_07230 0.70 +0.1 1,669,642 + CA264_07230 0.70 -1.5 1,669,642 + CA264_07230 0.70 +0.2 1,669,642 + CA264_07230 0.70 -0.2 1,669,643 - CA264_07230 0.71 -0.3 1,669,643 - CA264_07230 0.71 -0.1 1,669,733 + -1.7 1,669,733 + -1.0 1,669,734 - +0.1 1,669,737 + +1.8 1,669,738 - +0.0 1,669,738 - +0.3 1,669,738 - -0.1 1,669,739 + +0.5 1,669,739 + -0.1 1,669,740 - +0.3 1,669,740 - -0.3 1,669,872 - +0.3 1,669,905 + +0.0 1,669,905 + +0.5 1,669,906 - -0.2 1,669,929 + -0.0 1,669,929 + -1.6 1,669,944 + +2.3 1,669,945 - -0.3 1,669,958 + -0.0 1,669,959 - -0.1 1,669,962 - +0.2 1,669,962 - -0.2 1,669,989 + +0.1 1,669,996 + +0.1 1,669,996 + -0.1 1,669,997 - -0.4 1,670,002 + +0.0 1,670,003 - +0.1 1,670,003 - +0.2 1,670,006 - +0.1 1,670,022 + +0.2 1,670,028 + +0.6 1,670,028 + -0.2 1,670,028 + -1.6 1,670,029 - -0.5 1,670,029 - -1.2 1,670,029 - +0.3 1,670,118 + -1.5 1,670,119 - +0.5 1,670,126 + +0.2 1,670,126 + +2.0 1,670,127 - -0.2 1,670,127 - +0.0 1,670,128 + -0.3 1,670,128 + +0.4 1,670,129 - -0.9 1,670,129 - -0.2 1,670,207 + -0.1 1,670,237 + +0.7 1,670,237 + -1.0 1,670,245 + +0.1 1,670,246 - +0.5 1,670,356 - +0.3 1,670,366 + +0.0 1,670,377 + -0.6 1,670,400 + +0.4 1,670,430 + -0.1 1,670,436 + -1.0 1,670,436 + -0.1 1,670,436 + +0.1 1,670,437 - +0.4 1,670,439 + -0.5 1,670,534 + CA264_07235 0.22 +0.8 1,670,614 + CA264_07235 0.42 +0.9 1,670,665 + CA264_07235 0.55 -0.3 1,670,714 - CA264_07235 0.67 -0.8 1,670,714 - CA264_07235 0.67 +0.0 1,670,717 + CA264_07235 0.68 -0.4 1,670,717 + CA264_07235 0.68 -0.3 1,670,717 + CA264_07235 0.68 -0.6 1,670,718 - CA264_07235 0.68 -0.6 1,670,718 - CA264_07235 0.68 -0.3 1,670,741 + CA264_07235 0.74 -0.0 1,670,750 + CA264_07235 0.76 +2.0 1,670,750 + CA264_07235 0.76 +0.1 1,670,750 + CA264_07235 0.76 -0.3 1,670,750 + CA264_07235 0.76 -0.2 1,670,752 + CA264_07235 0.76 +0.0 1,670,753 - CA264_07235 0.77 +0.4 1,670,753 - CA264_07235 0.77 +1.2 1,670,753 - CA264_07235 0.77 +0.3 1,670,753 - CA264_07235 0.77 +0.1 1,670,773 + CA264_07235 0.82 +0.6 1,670,792 + CA264_07235 0.86 +1.4 1,670,793 - CA264_07235 0.87 +0.2 1,670,793 - CA264_07235 0.87 +0.1 1,670,844 - +0.5 1,670,902 + +0.3 1,670,910 + -0.8 1,670,995 + -0.5 1,670,995 + -1.0 1,671,083 - CA264_07240 0.24 +0.0 1,671,130 + CA264_07240 0.34 -0.5 1,671,146 + CA264_07240 0.37 -0.7 1,671,147 - CA264_07240 0.37 -1.0 1,671,147 - CA264_07240 0.37 -0.9 1,671,168 + CA264_07240 0.42 -1.2 1,671,168 + CA264_07240 0.42 -0.7 1,671,169 - CA264_07240 0.42 +0.0 1,671,169 - CA264_07240 0.42 +0.0 1,671,247 + CA264_07240 0.59 -0.1 1,671,247 + CA264_07240 0.59 -1.1 1,671,247 + CA264_07240 0.59 +0.9 1,671,247 + CA264_07240 0.59 +0.9 1,671,248 - CA264_07240 0.59 -0.0 1,671,248 - CA264_07240 0.59 -0.3 1,671,278 + CA264_07240 0.65 -0.9 1,671,417 + +2.8 1,671,472 + -0.7 1,671,472 + +0.4 1,671,473 - +0.8 1,671,501 + +0.5 1,671,588 + -0.1 1,671,589 - -0.5 1,671,644 + +1.4 1,671,644 + +1.5 1,671,760 - CA264_07245 0.17 +2.2 1,671,793 - CA264_07245 0.22 +1.9 1,671,793 - CA264_07245 0.22 +2.1
Or see this region's nucleotide sequence