Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02640 and CA264_02645 are separated by 522 nucleotides CA264_02645 and CA264_02650 are separated by 122 nucleotides
CA264_02640: CA264_02640 - SWFGD domain-containing protein, at 610,915 to 611,886
_02640
CA264_02645: CA264_02645 - hypothetical protein, at 612,409 to 612,795
_02645
CA264_02650: CA264_02650 - DNA topoisomerase III, at 612,918 to 615,365
_02650
Position (kb) 612
613 Strain fitness (log2 ratio) -2
-1
0
1
2 at 611.466 kb on - strand, within CA264_02640 at 611.474 kb on + strand, within CA264_02640 at 611.539 kb on + strand, within CA264_02640 at 611.600 kb on + strand, within CA264_02640 at 611.613 kb on - strand, within CA264_02640 at 611.617 kb on - strand, within CA264_02640 at 611.639 kb on + strand, within CA264_02640 at 611.639 kb on + strand, within CA264_02640 at 611.640 kb on - strand, within CA264_02640 at 611.640 kb on - strand, within CA264_02640 at 611.725 kb on - strand, within CA264_02640 at 611.805 kb on - strand at 611.807 kb on + strand at 611.861 kb on + strand at 611.876 kb on + strand at 611.876 kb on + strand at 611.877 kb on - strand at 611.887 kb on - strand at 611.892 kb on - strand at 611.892 kb on - strand at 611.892 kb on - strand at 611.897 kb on + strand at 611.902 kb on + strand at 611.919 kb on + strand at 611.985 kb on + strand at 611.985 kb on + strand at 611.985 kb on + strand at 611.985 kb on + strand at 611.986 kb on - strand at 611.986 kb on - strand at 611.990 kb on + strand at 611.990 kb on + strand at 612.017 kb on + strand at 612.042 kb on + strand at 612.047 kb on + strand at 612.140 kb on - strand at 612.157 kb on + strand at 612.159 kb on + strand at 612.319 kb on - strand at 612.346 kb on + strand at 612.346 kb on + strand at 612.346 kb on + strand at 612.346 kb on + strand at 612.347 kb on - strand at 612.347 kb on - strand at 612.383 kb on - strand at 612.391 kb on - strand at 612.394 kb on - strand at 612.420 kb on + strand at 612.420 kb on + strand at 612.435 kb on + strand at 612.435 kb on + strand at 612.459 kb on - strand, within CA264_02645 at 612.459 kb on - strand, within CA264_02645 at 612.504 kb on - strand, within CA264_02645 at 612.504 kb on - strand, within CA264_02645 at 612.504 kb on - strand, within CA264_02645 at 612.509 kb on + strand, within CA264_02645 at 612.580 kb on - strand, within CA264_02645 at 612.643 kb on - strand, within CA264_02645 at 612.687 kb on + strand, within CA264_02645 at 612.687 kb on + strand, within CA264_02645 at 612.721 kb on + strand, within CA264_02645 at 612.722 kb on - strand, within CA264_02645 at 612.723 kb on + strand, within CA264_02645 at 612.728 kb on + strand, within CA264_02645 at 612.753 kb on + strand, within CA264_02645 at 612.754 kb on - strand, within CA264_02645 at 612.763 kb on - strand at 612.794 kb on - strand at 612.794 kb on - strand at 612.854 kb on + strand at 612.855 kb on - strand at 612.933 kb on + strand at 612.995 kb on + strand at 612.996 kb on - strand at 613.255 kb on + strand, within CA264_02650 at 613.351 kb on + strand, within CA264_02650 at 613.586 kb on - strand, within CA264_02650 at 613.586 kb on - strand, within CA264_02650 at 613.612 kb on - strand, within CA264_02650 at 613.792 kb on + strand, within CA264_02650 at 613.792 kb on + strand, within CA264_02650 at 613.792 kb on + strand, within CA264_02650 at 613.792 kb on + strand, within CA264_02650 at 613.793 kb on - strand, within CA264_02650
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 611,466 - CA264_02640 0.57 -0.2 611,474 + CA264_02640 0.58 +1.0 611,539 + CA264_02640 0.64 -0.2 611,600 + CA264_02640 0.70 -0.1 611,613 - CA264_02640 0.72 +0.4 611,617 - CA264_02640 0.72 +0.2 611,639 + CA264_02640 0.74 +0.1 611,639 + CA264_02640 0.74 -0.3 611,640 - CA264_02640 0.75 +0.7 611,640 - CA264_02640 0.75 +0.1 611,725 - CA264_02640 0.83 +0.2 611,805 - -0.0 611,807 + -0.0 611,861 + -0.7 611,876 + +0.1 611,876 + -0.0 611,877 - +0.3 611,887 - -1.1 611,892 - -0.1 611,892 - +0.9 611,892 - +0.5 611,897 + -0.3 611,902 + -0.4 611,919 + -0.7 611,985 + -0.4 611,985 + +0.2 611,985 + +0.3 611,985 + +0.3 611,986 - +0.1 611,986 - +1.5 611,990 + +0.7 611,990 + -0.0 612,017 + +1.4 612,042 + +0.9 612,047 + -1.9 612,140 - +0.9 612,157 + +0.4 612,159 + +1.0 612,319 - +1.4 612,346 + +2.0 612,346 + +0.3 612,346 + +0.9 612,346 + +1.0 612,347 - -0.5 612,347 - -0.2 612,383 - +0.2 612,391 - -0.1 612,394 - +0.9 612,420 + +0.8 612,420 + -0.3 612,435 + +0.4 612,435 + -0.6 612,459 - CA264_02645 0.13 -0.8 612,459 - CA264_02645 0.13 +1.0 612,504 - CA264_02645 0.25 -0.3 612,504 - CA264_02645 0.25 -0.7 612,504 - CA264_02645 0.25 +0.2 612,509 + CA264_02645 0.26 +0.3 612,580 - CA264_02645 0.44 -0.4 612,643 - CA264_02645 0.60 +0.6 612,687 + CA264_02645 0.72 -0.5 612,687 + CA264_02645 0.72 +2.6 612,721 + CA264_02645 0.81 +1.6 612,722 - CA264_02645 0.81 +0.1 612,723 + CA264_02645 0.81 -0.1 612,728 + CA264_02645 0.82 -0.6 612,753 + CA264_02645 0.89 -0.1 612,754 - CA264_02645 0.89 -0.5 612,763 - -0.4 612,794 - -0.4 612,794 - -0.3 612,854 + -0.3 612,855 - -0.1 612,933 + +0.4 612,995 + -0.3 612,996 - -0.3 613,255 + CA264_02650 0.14 -1.0 613,351 + CA264_02650 0.18 +0.3 613,586 - CA264_02650 0.27 +0.1 613,586 - CA264_02650 0.27 -0.1 613,612 - CA264_02650 0.28 +0.0 613,792 + CA264_02650 0.36 -1.3 613,792 + CA264_02650 0.36 -0.1 613,792 + CA264_02650 0.36 +1.2 613,792 + CA264_02650 0.36 -0.1 613,793 - CA264_02650 0.36 -0.5
Or see this region's nucleotide sequence