Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00210 and CA264_00215 are separated by 78 nucleotides CA264_00215 and CA264_00220 are separated by 32 nucleotides CA264_00220 and CA264_00225 are separated by 2 nucleotides
CA264_00210: CA264_00210 - glycine cleavage system protein T, at 53,913 to 55,001
_00210
CA264_00215: CA264_00215 - 2-phosphosulfolactate phosphatase, at 55,080 to 55,802
_00215
CA264_00220: CA264_00220 - pyrophosphatase, at 55,835 to 56,161
_00220
CA264_00225: CA264_00225 - D-tyrosyl-tRNA(Tyr) deacylase, at 56,164 to 56,622
_00225
Position (kb) 55
56 Strain fitness (log2 ratio) -1
0
1
2 at 54.962 kb on - strand at 54.986 kb on + strand at 54.986 kb on + strand at 54.993 kb on - strand at 55.037 kb on - strand at 55.091 kb on - strand at 55.091 kb on - strand at 55.774 kb on + strand at 55.858 kb on + strand at 55.962 kb on - strand, within CA264_00220 at 55.962 kb on - strand, within CA264_00220 at 56.072 kb on + strand, within CA264_00220 at 56.073 kb on - strand, within CA264_00220 at 56.088 kb on - strand, within CA264_00220 at 56.128 kb on + strand, within CA264_00220 at 56.170 kb on + strand at 56.306 kb on + strand, within CA264_00225 at 56.306 kb on + strand, within CA264_00225 at 56.339 kb on + strand, within CA264_00225 at 56.339 kb on + strand, within CA264_00225 at 56.340 kb on - strand, within CA264_00225 at 56.340 kb on - strand, within CA264_00225 at 56.340 kb on - strand, within CA264_00225 at 56.344 kb on - strand, within CA264_00225 at 56.344 kb on - strand, within CA264_00225 at 56.346 kb on - strand, within CA264_00225 at 56.346 kb on - strand, within CA264_00225 at 56.427 kb on + strand, within CA264_00225 at 56.431 kb on + strand, within CA264_00225 at 56.432 kb on - strand, within CA264_00225 at 56.432 kb on - strand, within CA264_00225 at 56.432 kb on - strand, within CA264_00225 at 56.442 kb on + strand, within CA264_00225 at 56.567 kb on - strand, within CA264_00225 at 56.652 kb on - strand at 56.676 kb on - strand at 56.681 kb on + strand at 56.682 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 54,962 - +0.3 54,986 + +0.1 54,986 + -0.0 54,993 - -0.2 55,037 - -0.0 55,091 - -0.5 55,091 - +0.6 55,774 + -0.7 55,858 + -0.1 55,962 - CA264_00220 0.39 -0.1 55,962 - CA264_00220 0.39 -0.1 56,072 + CA264_00220 0.72 +1.0 56,073 - CA264_00220 0.73 -0.1 56,088 - CA264_00220 0.77 -0.4 56,128 + CA264_00220 0.90 +0.6 56,170 + -0.4 56,306 + CA264_00225 0.31 -0.2 56,306 + CA264_00225 0.31 -0.9 56,339 + CA264_00225 0.38 +0.3 56,339 + CA264_00225 0.38 +0.5 56,340 - CA264_00225 0.38 +0.4 56,340 - CA264_00225 0.38 +0.0 56,340 - CA264_00225 0.38 +0.0 56,344 - CA264_00225 0.39 +0.1 56,344 - CA264_00225 0.39 -0.2 56,346 - CA264_00225 0.40 -0.2 56,346 - CA264_00225 0.40 +1.9 56,427 + CA264_00225 0.57 +1.5 56,431 + CA264_00225 0.58 +0.9 56,432 - CA264_00225 0.58 +0.1 56,432 - CA264_00225 0.58 -1.3 56,432 - CA264_00225 0.58 -0.4 56,442 + CA264_00225 0.61 -0.3 56,567 - CA264_00225 0.88 -0.6 56,652 - -1.4 56,676 - +0.3 56,681 + -0.8 56,682 - +0.2
Or see this region's nucleotide sequence