Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS16325 and ABID97_RS16330 overlap by 11 nucleotides ABID97_RS16330 and ABID97_RS16335 are separated by 1 nucleotides ABID97_RS16335 and ABID97_RS16340 are separated by 46 nucleotides
ABID97_RS16325: ABID97_RS16325 - tRNA adenosine(34) deaminase TadA, at 3,381,340 to 3,382,455
_RS16325
ABID97_RS16330: ABID97_RS16330 - hypothetical protein, at 3,382,445 to 3,382,681
_RS16330
ABID97_RS16335: ABID97_RS16335 - FMN-binding negative transcriptional regulator, at 3,382,683 to 3,383,327
_RS16335
ABID97_RS16340: ABID97_RS16340 - ankyrin repeat domain-containing protein, at 3,383,374 to 3,384,069
_RS16340
Position (kb)
3382
3383 Strain fitness (log2 ratio)
-1
0
1
2 at 3382.774 kb on + strand, within ABID97_RS16335 at 3382.774 kb on + strand, within ABID97_RS16335 at 3382.775 kb on - strand, within ABID97_RS16335 at 3383.023 kb on + strand, within ABID97_RS16335 at 3383.023 kb on + strand, within ABID97_RS16335 at 3383.023 kb on + strand, within ABID97_RS16335 at 3383.023 kb on + strand, within ABID97_RS16335 at 3383.024 kb on - strand, within ABID97_RS16335 at 3383.024 kb on - strand, within ABID97_RS16335 at 3383.024 kb on - strand, within ABID97_RS16335 at 3383.024 kb on - strand, within ABID97_RS16335 at 3383.074 kb on + strand, within ABID97_RS16335 at 3383.075 kb on - strand, within ABID97_RS16335 at 3383.323 kb on + strand at 3383.323 kb on + strand at 3383.323 kb on + strand at 3383.323 kb on + strand at 3383.323 kb on + strand at 3383.323 kb on + strand at 3383.323 kb on + strand at 3383.323 kb on + strand at 3383.323 kb on + strand at 3383.324 kb on - strand at 3383.324 kb on - strand at 3383.324 kb on - strand at 3383.324 kb on - strand at 3383.324 kb on - strand at 3383.324 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 3,382,774 + ABID97_RS16335 0.14 -0.2 3,382,774 + ABID97_RS16335 0.14 -0.1 3,382,775 - ABID97_RS16335 0.14 -0.3 3,383,023 + ABID97_RS16335 0.53 -0.7 3,383,023 + ABID97_RS16335 0.53 +0.5 3,383,023 + ABID97_RS16335 0.53 -0.1 3,383,023 + ABID97_RS16335 0.53 +0.1 3,383,024 - ABID97_RS16335 0.53 +0.2 3,383,024 - ABID97_RS16335 0.53 -0.2 3,383,024 - ABID97_RS16335 0.53 +1.2 3,383,024 - ABID97_RS16335 0.53 -0.8 3,383,074 + ABID97_RS16335 0.61 -0.5 3,383,075 - ABID97_RS16335 0.61 -0.4 3,383,323 + -0.2 3,383,323 + +0.3 3,383,323 + -0.5 3,383,323 + +2.2 3,383,323 + -0.1 3,383,323 + +1.6 3,383,323 + -1.5 3,383,323 + +0.1 3,383,323 + +0.2 3,383,324 - -0.7 3,383,324 - -0.3 3,383,324 - -1.1 3,383,324 - +0.1 3,383,324 - +0.5 3,383,324 - -0.0
Or see this region's nucleotide sequence