Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2878

Experiment: KB with Piperacillin 0.775 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Piperacillin 0.775 ug/ml
3,452,238	-		Psyr_2877	0.33	-0.9
3,452,485	-		Psyr_2877	0.57	+2.2
3,452,485	-		Psyr_2877	0.57	+0.5
3,452,485	-		Psyr_2877	0.57	+0.1
3,452,741	+		Psyr_2877	0.83	-0.5
3,453,347	-		Psyr_2878	0.12	-0.6
3,453,836	-		Psyr_2878	0.42	+0.1
3,453,893	+		Psyr_2878	0.45	+0.5
3,453,894	-		Psyr_2878	0.45	+0.9
3,454,179	-		Psyr_2878	0.63	-0.7
3,454,390	+		Psyr_2878	0.76	-2.4
3,454,392	+		Psyr_2878	0.76	-0.6
3,454,392	+		Psyr_2878	0.76	-0.9
3,454,393	-		Psyr_2878	0.76	+0.9
3,454,416	+		Psyr_2878	0.77	-1.4
3,454,416	+		Psyr_2878	0.77	-0.3
3,454,417	-		Psyr_2878	0.77	+0.7
3,454,425	+		Psyr_2878	0.78	+1.2
3,454,425	+		Psyr_2878	0.78	-1.1
3,454,426	-		Psyr_2878	0.78	-0.5
3,454,426	-		Psyr_2878	0.78	-1.9
3,454,629	-				-0.9
3,454,708	+				+0.3
3,454,709	-				-1.4
3,454,815	+				-0.9
3,454,820	+				-0.2
3,454,820	+				-0.8
3,454,821	-				-0.4
3,454,918	-				-0.6
3,454,918	-				-0.3
3,455,380	+		Psyr_2879	0.89	-0.9
3,455,381	-		Psyr_2879	0.89	+1.4
3,455,381	-		Psyr_2879	0.89	-0.2
3,455,381	-		Psyr_2879	0.89	-0.0
3,455,448	-				-0.1
3,455,456	+				+0.5
3,455,457	-				-0.3
3,455,457	-				-0.9
3,455,460	+				-0.8
3,455,461	-				-0.5
3,455,586	+				-2.2
3,455,586	+				-0.5
3,455,586	+				-1.5
3,455,586	+				-0.8
3,455,587	-				+0.6
3,455,587	-				-0.2
3,455,587	-				+0.4
3,455,731	+				-1.5
3,455,731	+				-2.7
3,455,731	+				-3.4
3,455,732	-				-0.4
3,455,732	-				-0.6
3,455,733	+				-2.0
3,455,733	+				-1.2
3,455,733	+				-1.2
3,455,733	+				-1.7
3,455,733	+				-1.3
3,455,733	+				+0.1
3,455,734	-				+0.0
3,455,734	-				+3.6
3,455,734	-				-0.1
3,455,734	-				+0.2
3,455,734	-				+0.5
3,455,734	-				+0.3
3,455,734	-				-1.5
3,455,734	-				-0.3
3,455,742	-				-0.5