Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2518

Experiment: KB with Piperacillin 0.775 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Piperacillin 0.775 ug/ml
2,926,104	-		Psyr_2516	0.65	+0.9
2,926,109	+		Psyr_2516	0.65	+0.9
2,926,109	+		Psyr_2516	0.65	-1.3
2,926,109	+		Psyr_2516	0.65	-1.2
2,926,109	+		Psyr_2516	0.65	+0.8
2,926,109	+		Psyr_2516	0.65	+0.8
2,926,109	+		Psyr_2516	0.65	+0.3
2,926,109	+		Psyr_2516	0.65	+1.3
2,926,110	-		Psyr_2516	0.65	-1.8
2,926,110	-		Psyr_2516	0.65	+1.5
2,926,110	-		Psyr_2516	0.65	-1.0
2,926,110	-		Psyr_2516	0.65	-1.3
2,926,307	+		Psyr_2516	0.85	-2.1
2,926,307	+		Psyr_2516	0.85	-1.2
2,926,307	+		Psyr_2516	0.85	-0.8
2,926,308	-		Psyr_2516	0.85	-2.4
2,926,308	-		Psyr_2516	0.85	+0.2
2,926,311	-		Psyr_2516	0.85	-0.2
2,926,311	-		Psyr_2516	0.85	+0.7
2,926,384	+				-0.5
2,926,774	-				-0.4
2,926,790	-				-1.1
2,926,812	-				-1.8
2,926,812	-				-1.5
2,927,084	+				-0.6
2,927,230	+		Psyr_2518	0.22	+1.3
2,927,231	-		Psyr_2518	0.22	-1.5
2,927,231	-		Psyr_2518	0.22	-0.2
2,927,302	+		Psyr_2518	0.32	-0.0
2,927,403	+		Psyr_2518	0.47	-2.4
2,927,404	-		Psyr_2518	0.47	+0.3
2,927,409	+		Psyr_2518	0.48	-0.6
2,927,409	+		Psyr_2518	0.48	+0.3
2,927,526	+		Psyr_2518	0.65	-0.7
2,927,527	-		Psyr_2518	0.65	+1.1
2,927,545	-		Psyr_2518	0.68	-0.5
2,927,545	-		Psyr_2518	0.68	-0.4
2,927,545	-		Psyr_2518	0.68	+0.1
2,927,818	-				+1.9
2,927,819	+				+0.2
2,927,819	+				-0.8
2,927,820	-				-0.5
2,927,924	+		Psyr_2519	0.14	+0.6
2,928,102	-		Psyr_2519	0.32	-1.1
2,928,170	+		Psyr_2519	0.39	+0.3
2,928,325	+		Psyr_2519	0.54	-0.7
2,928,325	+		Psyr_2519	0.54	+0.8
2,928,325	+		Psyr_2519	0.54	-0.2
2,928,325	+		Psyr_2519	0.54	+0.5
2,928,325	+		Psyr_2519	0.54	+1.6
2,928,325	+		Psyr_2519	0.54	+0.1
2,928,326	-		Psyr_2519	0.54	+0.5
2,928,326	-		Psyr_2519	0.54	-0.2
2,928,326	-		Psyr_2519	0.54	+1.4
2,928,326	-		Psyr_2519	0.54	-0.1
2,928,326	-		Psyr_2519	0.54	-0.4
2,928,416	+		Psyr_2519	0.63	-1.7
2,928,476	+		Psyr_2519	0.69	-0.2
2,928,548	+		Psyr_2519	0.77	+0.4
2,928,548	+		Psyr_2519	0.77	-0.6
2,928,548	+		Psyr_2519	0.77	-0.2
2,928,549	-		Psyr_2519	0.77	+0.8
2,928,549	-		Psyr_2519	0.77	+0.3
2,928,549	-		Psyr_2519	0.77	+0.6
2,928,552	+		Psyr_2519	0.77	-1.0
2,928,552	+		Psyr_2519	0.77	-1.1
2,928,552	+		Psyr_2519	0.77	-1.8
2,928,553	-		Psyr_2519	0.77	-0.1
2,928,553	-		Psyr_2519	0.77	+1.5
2,928,611	+		Psyr_2519	0.83	-1.5
2,928,612	-		Psyr_2519	0.83	+0.8
2,928,612	-		Psyr_2519	0.83	-0.4
2,928,701	+				-1.0
2,928,701	+				+2.0