Experiment: Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4507 and PfGW456L13_4508 are separated by 327 nucleotides PfGW456L13_4508 and PfGW456L13_4509 are separated by 10 nucleotides PfGW456L13_4509 and PfGW456L13_4510 are separated by 151 nucleotides
PfGW456L13_4507 - 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7), at 5,040,233 to 5,041,111
_4507
PfGW456L13_4508 - Glycine cleavage system transcriptional antiactivator GcvR, at 5,041,439 to 5,041,999
_4508
PfGW456L13_4509 - Thiol peroxidase, Bcp-type (EC 1.11.1.15), at 5,042,010 to 5,042,483
_4509
PfGW456L13_4510 - Putative permease PerM (= YfgO), at 5,042,635 to 5,043,705
_4510
Position (kb) 5042
5043 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5041.149 kb on - strand at 5041.179 kb on + strand at 5041.179 kb on + strand at 5041.179 kb on + strand at 5041.179 kb on + strand at 5041.179 kb on + strand at 5041.180 kb on - strand at 5041.180 kb on - strand at 5041.276 kb on + strand at 5041.474 kb on + strand at 5041.613 kb on - strand, within PfGW456L13_4508 at 5041.654 kb on - strand, within PfGW456L13_4508 at 5041.730 kb on + strand, within PfGW456L13_4508 at 5041.730 kb on + strand, within PfGW456L13_4508 at 5041.730 kb on + strand, within PfGW456L13_4508 at 5041.731 kb on - strand, within PfGW456L13_4508 at 5041.731 kb on - strand, within PfGW456L13_4508 at 5041.731 kb on - strand, within PfGW456L13_4508 at 5041.739 kb on + strand, within PfGW456L13_4508 at 5041.739 kb on + strand, within PfGW456L13_4508 at 5041.739 kb on + strand, within PfGW456L13_4508 at 5041.739 kb on + strand, within PfGW456L13_4508 at 5041.739 kb on + strand, within PfGW456L13_4508 at 5041.739 kb on + strand, within PfGW456L13_4508 at 5041.739 kb on + strand, within PfGW456L13_4508 at 5041.739 kb on + strand, within PfGW456L13_4508 at 5041.739 kb on + strand, within PfGW456L13_4508 at 5041.739 kb on + strand, within PfGW456L13_4508 at 5041.740 kb on - strand, within PfGW456L13_4508 at 5041.740 kb on - strand, within PfGW456L13_4508 at 5041.740 kb on - strand, within PfGW456L13_4508 at 5041.740 kb on - strand, within PfGW456L13_4508 at 5041.740 kb on - strand, within PfGW456L13_4508 at 5041.740 kb on - strand, within PfGW456L13_4508 at 5041.740 kb on - strand, within PfGW456L13_4508 at 5041.740 kb on - strand, within PfGW456L13_4508 at 5041.740 kb on - strand, within PfGW456L13_4508 at 5041.740 kb on - strand, within PfGW456L13_4508 at 5041.755 kb on - strand, within PfGW456L13_4508 at 5041.835 kb on + strand, within PfGW456L13_4508 at 5041.835 kb on + strand, within PfGW456L13_4508 at 5041.835 kb on + strand, within PfGW456L13_4508 at 5041.836 kb on - strand, within PfGW456L13_4508 at 5041.836 kb on - strand, within PfGW456L13_4508 at 5041.836 kb on - strand, within PfGW456L13_4508 at 5041.836 kb on - strand, within PfGW456L13_4508 at 5041.997 kb on + strand at 5041.997 kb on + strand at 5041.997 kb on + strand at 5041.997 kb on + strand at 5041.997 kb on + strand at 5041.997 kb on + strand at 5041.997 kb on + strand at 5041.997 kb on + strand at 5041.997 kb on + strand at 5041.997 kb on + strand at 5041.997 kb on + strand at 5041.997 kb on + strand at 5041.997 kb on + strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5041.998 kb on - strand at 5042.104 kb on + strand, within PfGW456L13_4509 at 5042.105 kb on - strand, within PfGW456L13_4509 at 5042.112 kb on + strand, within PfGW456L13_4509 at 5042.112 kb on + strand, within PfGW456L13_4509 at 5042.112 kb on + strand, within PfGW456L13_4509 at 5042.112 kb on + strand, within PfGW456L13_4509 at 5042.112 kb on + strand, within PfGW456L13_4509 at 5042.112 kb on + strand, within PfGW456L13_4509 at 5042.112 kb on + strand, within PfGW456L13_4509 at 5042.112 kb on + strand, within PfGW456L13_4509 at 5042.112 kb on + strand, within PfGW456L13_4509 at 5042.113 kb on - strand, within PfGW456L13_4509 at 5042.113 kb on - strand, within PfGW456L13_4509 at 5042.113 kb on - strand, within PfGW456L13_4509 at 5042.113 kb on - strand, within PfGW456L13_4509 at 5042.175 kb on + strand, within PfGW456L13_4509 at 5042.175 kb on + strand, within PfGW456L13_4509 at 5042.176 kb on - strand, within PfGW456L13_4509 at 5042.176 kb on - strand, within PfGW456L13_4509 at 5042.340 kb on + strand, within PfGW456L13_4509 at 5042.352 kb on + strand, within PfGW456L13_4509 at 5042.352 kb on + strand, within PfGW456L13_4509 at 5042.352 kb on + strand, within PfGW456L13_4509 at 5042.352 kb on + strand, within PfGW456L13_4509 at 5042.352 kb on + strand, within PfGW456L13_4509 at 5042.352 kb on + strand, within PfGW456L13_4509 at 5042.352 kb on + strand, within PfGW456L13_4509 at 5042.352 kb on + strand, within PfGW456L13_4509 at 5042.352 kb on + strand, within PfGW456L13_4509 at 5042.353 kb on - strand, within PfGW456L13_4509 at 5042.353 kb on - strand, within PfGW456L13_4509 at 5042.353 kb on - strand, within PfGW456L13_4509 at 5042.353 kb on - strand, within PfGW456L13_4509 at 5042.353 kb on - strand, within PfGW456L13_4509 at 5042.488 kb on - strand at 5042.534 kb on + strand at 5042.534 kb on + strand at 5042.534 kb on + strand at 5042.549 kb on + strand at 5042.550 kb on - strand at 5042.550 kb on - strand at 5042.853 kb on - strand, within PfGW456L13_4510 at 5042.867 kb on + strand, within PfGW456L13_4510 at 5042.867 kb on + strand at 5042.867 kb on + strand, within PfGW456L13_4510 at 5042.867 kb on + strand, within PfGW456L13_4510 at 5042.867 kb on + strand, within PfGW456L13_4510 at 5042.867 kb on + strand, within PfGW456L13_4510 at 5042.867 kb on + strand, within PfGW456L13_4510 at 5042.867 kb on + strand, within PfGW456L13_4510 at 5042.867 kb on + strand, within PfGW456L13_4510 at 5042.867 kb on + strand, within PfGW456L13_4510 at 5042.867 kb on + strand, within PfGW456L13_4510 at 5042.867 kb on + strand, within PfGW456L13_4510 at 5042.867 kb on + strand, within PfGW456L13_4510 at 5042.868 kb on - strand, within PfGW456L13_4510 at 5042.868 kb on - strand, within PfGW456L13_4510 at 5042.868 kb on - strand, within PfGW456L13_4510 at 5042.868 kb on - strand, within PfGW456L13_4510 at 5042.868 kb on - strand, within PfGW456L13_4510 at 5042.868 kb on - strand, within PfGW456L13_4510 at 5042.868 kb on - strand, within PfGW456L13_4510 at 5042.868 kb on - strand, within PfGW456L13_4510 at 5042.868 kb on - strand, within PfGW456L13_4510 at 5042.868 kb on - strand, within PfGW456L13_4510 at 5042.868 kb on - strand, within PfGW456L13_4510 at 5042.869 kb on + strand, within PfGW456L13_4510 at 5042.869 kb on + strand, within PfGW456L13_4510 at 5042.869 kb on + strand, within PfGW456L13_4510 at 5042.945 kb on + strand, within PfGW456L13_4510 at 5042.945 kb on + strand, within PfGW456L13_4510 at 5042.945 kb on + strand, within PfGW456L13_4510 at 5042.945 kb on + strand, within PfGW456L13_4510 at 5042.945 kb on + strand, within PfGW456L13_4510 at 5042.945 kb on + strand, within PfGW456L13_4510 at 5042.946 kb on - strand, within PfGW456L13_4510 at 5042.993 kb on + strand at 5042.993 kb on + strand, within PfGW456L13_4510 at 5042.994 kb on - strand, within PfGW456L13_4510 at 5043.023 kb on + strand, within PfGW456L13_4510 at 5043.023 kb on + strand, within PfGW456L13_4510 at 5043.023 kb on + strand, within PfGW456L13_4510 at 5043.024 kb on - strand, within PfGW456L13_4510 at 5043.024 kb on - strand, within PfGW456L13_4510 at 5043.024 kb on - strand, within PfGW456L13_4510 at 5043.024 kb on - strand, within PfGW456L13_4510 at 5043.024 kb on - strand, within PfGW456L13_4510 at 5043.024 kb on - strand, within PfGW456L13_4510 at 5043.071 kb on + strand, within PfGW456L13_4510 at 5043.071 kb on + strand, within PfGW456L13_4510 at 5043.071 kb on + strand, within PfGW456L13_4510 at 5043.071 kb on + strand, within PfGW456L13_4510 at 5043.071 kb on + strand, within PfGW456L13_4510 at 5043.071 kb on + strand, within PfGW456L13_4510 at 5043.072 kb on - strand, within PfGW456L13_4510 at 5043.072 kb on - strand, within PfGW456L13_4510 at 5043.072 kb on - strand, within PfGW456L13_4510 at 5043.072 kb on - strand, within PfGW456L13_4510 at 5043.072 kb on - strand, within PfGW456L13_4510 at 5043.072 kb on - strand, within PfGW456L13_4510 at 5043.072 kb on - strand, within PfGW456L13_4510 at 5043.072 kb on - strand, within PfGW456L13_4510 at 5043.212 kb on + strand, within PfGW456L13_4510 at 5043.212 kb on + strand, within PfGW456L13_4510 at 5043.212 kb on + strand, within PfGW456L13_4510 at 5043.212 kb on + strand, within PfGW456L13_4510 at 5043.212 kb on + strand, within PfGW456L13_4510 at 5043.212 kb on + strand, within PfGW456L13_4510 at 5043.212 kb on + strand, within PfGW456L13_4510 at 5043.213 kb on - strand, within PfGW456L13_4510 at 5043.213 kb on - strand, within PfGW456L13_4510 at 5043.213 kb on - strand, within PfGW456L13_4510 at 5043.213 kb on - strand, within PfGW456L13_4510 at 5043.213 kb on - strand, within PfGW456L13_4510 at 5043.316 kb on + strand, within PfGW456L13_4510 at 5043.316 kb on + strand, within PfGW456L13_4510 at 5043.316 kb on + strand, within PfGW456L13_4510 at 5043.316 kb on + strand, within PfGW456L13_4510 at 5043.316 kb on + strand, within PfGW456L13_4510 at 5043.316 kb on + strand, within PfGW456L13_4510 at 5043.316 kb on + strand, within PfGW456L13_4510 at 5043.317 kb on - strand, within PfGW456L13_4510 at 5043.317 kb on - strand, within PfGW456L13_4510 at 5043.317 kb on - strand, within PfGW456L13_4510
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.004 mg/ml remove 5,041,149 - -0.8 5,041,179 + -0.2 5,041,179 + -0.9 5,041,179 + +0.2 5,041,179 + -0.4 5,041,179 + -0.6 5,041,180 - -0.8 5,041,180 - -0.5 5,041,276 + +1.1 5,041,474 + -1.7 5,041,613 - PfGW456L13_4508 0.31 -0.2 5,041,654 - PfGW456L13_4508 0.38 -0.2 5,041,730 + PfGW456L13_4508 0.52 -0.5 5,041,730 + PfGW456L13_4508 0.52 +0.1 5,041,730 + PfGW456L13_4508 0.52 -0.7 5,041,731 - PfGW456L13_4508 0.52 -0.7 5,041,731 - PfGW456L13_4508 0.52 +0.5 5,041,731 - PfGW456L13_4508 0.52 -0.3 5,041,739 + PfGW456L13_4508 0.53 +1.1 5,041,739 + PfGW456L13_4508 0.53 -1.6 5,041,739 + PfGW456L13_4508 0.53 -0.6 5,041,739 + PfGW456L13_4508 0.53 -0.3 5,041,739 + PfGW456L13_4508 0.53 -0.2 5,041,739 + PfGW456L13_4508 0.53 +0.9 5,041,739 + PfGW456L13_4508 0.53 -3.2 5,041,739 + PfGW456L13_4508 0.53 -0.2 5,041,739 + PfGW456L13_4508 0.53 -0.4 5,041,739 + PfGW456L13_4508 0.53 -0.7 5,041,740 - PfGW456L13_4508 0.54 +0.3 5,041,740 - PfGW456L13_4508 0.54 -0.3 5,041,740 - PfGW456L13_4508 0.54 -0.1 5,041,740 - PfGW456L13_4508 0.54 +0.3 5,041,740 - PfGW456L13_4508 0.54 +1.1 5,041,740 - PfGW456L13_4508 0.54 -0.6 5,041,740 - PfGW456L13_4508 0.54 -0.5 5,041,740 - PfGW456L13_4508 0.54 +0.5 5,041,740 - PfGW456L13_4508 0.54 +1.1 5,041,740 - PfGW456L13_4508 0.54 -0.8 5,041,755 - PfGW456L13_4508 0.56 -1.2 5,041,835 + PfGW456L13_4508 0.71 +0.4 5,041,835 + PfGW456L13_4508 0.71 -0.2 5,041,835 + PfGW456L13_4508 0.71 +0.8 5,041,836 - PfGW456L13_4508 0.71 +0.2 5,041,836 - PfGW456L13_4508 0.71 +0.4 5,041,836 - PfGW456L13_4508 0.71 -1.2 5,041,836 - PfGW456L13_4508 0.71 +0.4 5,041,997 + -0.1 5,041,997 + -2.2 5,041,997 + -0.1 5,041,997 + -0.5 5,041,997 + -0.1 5,041,997 + -0.7 5,041,997 + -0.4 5,041,997 + -0.3 5,041,997 + -0.7 5,041,997 + -0.4 5,041,997 + -0.2 5,041,997 + +0.9 5,041,997 + -1.8 5,041,998 - -0.2 5,041,998 - +0.9 5,041,998 - +0.9 5,041,998 - -0.1 5,041,998 - -0.5 5,041,998 - +0.8 5,041,998 - -0.3 5,041,998 - +0.5 5,041,998 - -0.1 5,041,998 - +0.0 5,041,998 - -0.2 5,041,998 - +0.5 5,041,998 - -1.9 5,041,998 - -0.4 5,042,104 + PfGW456L13_4509 0.20 -0.2 5,042,105 - PfGW456L13_4509 0.20 -0.3 5,042,112 + PfGW456L13_4509 0.22 -0.4 5,042,112 + PfGW456L13_4509 0.22 -0.8 5,042,112 + PfGW456L13_4509 0.22 +0.5 5,042,112 + PfGW456L13_4509 0.22 -0.5 5,042,112 + PfGW456L13_4509 0.22 +0.9 5,042,112 + PfGW456L13_4509 0.22 -0.0 5,042,112 + PfGW456L13_4509 0.22 -1.2 5,042,112 + PfGW456L13_4509 0.22 -1.7 5,042,112 + PfGW456L13_4509 0.22 -0.2 5,042,113 - PfGW456L13_4509 0.22 +0.0 5,042,113 - PfGW456L13_4509 0.22 -0.4 5,042,113 - PfGW456L13_4509 0.22 -0.8 5,042,113 - PfGW456L13_4509 0.22 -1.0 5,042,175 + PfGW456L13_4509 0.35 -0.8 5,042,175 + PfGW456L13_4509 0.35 +0.2 5,042,176 - PfGW456L13_4509 0.35 +1.2 5,042,176 - PfGW456L13_4509 0.35 -0.2 5,042,340 + PfGW456L13_4509 0.70 +0.4 5,042,352 + PfGW456L13_4509 0.72 -0.5 5,042,352 + PfGW456L13_4509 0.72 -0.3 5,042,352 + PfGW456L13_4509 0.72 -1.2 5,042,352 + PfGW456L13_4509 0.72 -0.4 5,042,352 + PfGW456L13_4509 0.72 +0.2 5,042,352 + PfGW456L13_4509 0.72 +0.4 5,042,352 + PfGW456L13_4509 0.72 -0.9 5,042,352 + PfGW456L13_4509 0.72 -0.2 5,042,352 + PfGW456L13_4509 0.72 +0.0 5,042,353 - PfGW456L13_4509 0.72 -0.9 5,042,353 - PfGW456L13_4509 0.72 -0.2 5,042,353 - PfGW456L13_4509 0.72 +0.3 5,042,353 - PfGW456L13_4509 0.72 +0.1 5,042,353 - PfGW456L13_4509 0.72 +0.4 5,042,488 - +0.2 5,042,534 + -1.6 5,042,534 + -0.9 5,042,534 + +0.4 5,042,549 + -0.3 5,042,550 - -0.5 5,042,550 - +1.5 5,042,853 - PfGW456L13_4510 0.20 -0.1 5,042,867 + PfGW456L13_4510 0.22 +1.7 5,042,867 + -0.2 5,042,867 + PfGW456L13_4510 0.22 -0.8 5,042,867 + PfGW456L13_4510 0.22 +0.8 5,042,867 + PfGW456L13_4510 0.22 -0.2 5,042,867 + PfGW456L13_4510 0.22 +0.3 5,042,867 + PfGW456L13_4510 0.22 -0.5 5,042,867 + PfGW456L13_4510 0.22 -0.7 5,042,867 + PfGW456L13_4510 0.22 -0.7 5,042,867 + PfGW456L13_4510 0.22 -0.2 5,042,867 + PfGW456L13_4510 0.22 +0.4 5,042,867 + PfGW456L13_4510 0.22 -0.8 5,042,867 + PfGW456L13_4510 0.22 -0.6 5,042,868 - PfGW456L13_4510 0.22 -0.2 5,042,868 - PfGW456L13_4510 0.22 +0.0 5,042,868 - PfGW456L13_4510 0.22 +1.3 5,042,868 - PfGW456L13_4510 0.22 +0.5 5,042,868 - PfGW456L13_4510 0.22 -0.2 5,042,868 - PfGW456L13_4510 0.22 +0.8 5,042,868 - PfGW456L13_4510 0.22 -0.3 5,042,868 - PfGW456L13_4510 0.22 +0.1 5,042,868 - PfGW456L13_4510 0.22 +0.0 5,042,868 - PfGW456L13_4510 0.22 -0.3 5,042,868 - PfGW456L13_4510 0.22 -0.2 5,042,869 + PfGW456L13_4510 0.22 +0.8 5,042,869 + PfGW456L13_4510 0.22 +0.6 5,042,869 + PfGW456L13_4510 0.22 +0.7 5,042,945 + PfGW456L13_4510 0.29 +0.2 5,042,945 + PfGW456L13_4510 0.29 +1.2 5,042,945 + PfGW456L13_4510 0.29 -0.3 5,042,945 + PfGW456L13_4510 0.29 +0.1 5,042,945 + PfGW456L13_4510 0.29 -0.3 5,042,945 + PfGW456L13_4510 0.29 -0.9 5,042,946 - PfGW456L13_4510 0.29 -0.4 5,042,993 + +1.3 5,042,993 + PfGW456L13_4510 0.33 -2.5 5,042,994 - PfGW456L13_4510 0.34 +0.5 5,043,023 + PfGW456L13_4510 0.36 +0.3 5,043,023 + PfGW456L13_4510 0.36 -0.6 5,043,023 + PfGW456L13_4510 0.36 +0.4 5,043,024 - PfGW456L13_4510 0.36 -0.1 5,043,024 - PfGW456L13_4510 0.36 -1.2 5,043,024 - PfGW456L13_4510 0.36 -1.2 5,043,024 - PfGW456L13_4510 0.36 -1.2 5,043,024 - PfGW456L13_4510 0.36 -1.1 5,043,024 - PfGW456L13_4510 0.36 -0.3 5,043,071 + PfGW456L13_4510 0.41 +0.2 5,043,071 + PfGW456L13_4510 0.41 -0.4 5,043,071 + PfGW456L13_4510 0.41 -0.1 5,043,071 + PfGW456L13_4510 0.41 -1.1 5,043,071 + PfGW456L13_4510 0.41 -0.2 5,043,071 + PfGW456L13_4510 0.41 -0.2 5,043,072 - PfGW456L13_4510 0.41 -0.8 5,043,072 - PfGW456L13_4510 0.41 -0.1 5,043,072 - PfGW456L13_4510 0.41 -0.8 5,043,072 - PfGW456L13_4510 0.41 +0.8 5,043,072 - PfGW456L13_4510 0.41 +0.6 5,043,072 - PfGW456L13_4510 0.41 -0.2 5,043,072 - PfGW456L13_4510 0.41 +0.1 5,043,072 - PfGW456L13_4510 0.41 +0.2 5,043,212 + PfGW456L13_4510 0.54 -0.4 5,043,212 + PfGW456L13_4510 0.54 +0.2 5,043,212 + PfGW456L13_4510 0.54 -1.0 5,043,212 + PfGW456L13_4510 0.54 -0.2 5,043,212 + PfGW456L13_4510 0.54 +1.3 5,043,212 + PfGW456L13_4510 0.54 +0.2 5,043,212 + PfGW456L13_4510 0.54 -0.2 5,043,213 - PfGW456L13_4510 0.54 +0.2 5,043,213 - PfGW456L13_4510 0.54 +1.3 5,043,213 - PfGW456L13_4510 0.54 -0.2 5,043,213 - PfGW456L13_4510 0.54 -0.1 5,043,213 - PfGW456L13_4510 0.54 -1.0 5,043,316 + PfGW456L13_4510 0.64 -0.2 5,043,316 + PfGW456L13_4510 0.64 -0.7 5,043,316 + PfGW456L13_4510 0.64 -1.2 5,043,316 + PfGW456L13_4510 0.64 +0.5 5,043,316 + PfGW456L13_4510 0.64 +0.3 5,043,316 + PfGW456L13_4510 0.64 +0.3 5,043,316 + PfGW456L13_4510 0.64 -0.5 5,043,317 - PfGW456L13_4510 0.64 -0.4 5,043,317 - PfGW456L13_4510 0.64 +0.2 5,043,317 - PfGW456L13_4510 0.64 -0.4
Or see this region's nucleotide sequence