Experiment: Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2526 and PfGW456L13_2527 are separated by 600 nucleotides PfGW456L13_2527 and PfGW456L13_2528 are separated by 42 nucleotides
PfGW456L13_2526 - 4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-), at 2,793,539 to 2,794,054
_2526
PfGW456L13_2527 - hypothetical protein, at 2,794,655 to 2,795,257
_2527
PfGW456L13_2528 - Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme, at 2,795,300 to 2,796,484
_2528
Position (kb)
2794
2795
2796 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2793.672 kb on + strand, within PfGW456L13_2526 at 2793.726 kb on + strand, within PfGW456L13_2526 at 2793.985 kb on + strand, within PfGW456L13_2526 at 2794.135 kb on + strand at 2794.135 kb on + strand at 2794.136 kb on - strand at 2794.182 kb on - strand at 2794.182 kb on - strand at 2794.182 kb on - strand at 2794.182 kb on - strand at 2794.182 kb on - strand at 2794.182 kb on - strand at 2794.182 kb on - strand at 2794.186 kb on - strand at 2794.611 kb on + strand at 2794.611 kb on + strand at 2794.619 kb on - strand at 2794.735 kb on + strand, within PfGW456L13_2527 at 2794.736 kb on - strand, within PfGW456L13_2527 at 2794.981 kb on + strand, within PfGW456L13_2527 at 2794.981 kb on + strand, within PfGW456L13_2527 at 2794.985 kb on + strand, within PfGW456L13_2527 at 2794.985 kb on + strand, within PfGW456L13_2527 at 2794.985 kb on + strand, within PfGW456L13_2527 at 2794.985 kb on + strand, within PfGW456L13_2527 at 2794.985 kb on + strand, within PfGW456L13_2527 at 2794.985 kb on + strand, within PfGW456L13_2527 at 2794.985 kb on + strand, within PfGW456L13_2527 at 2794.985 kb on + strand, within PfGW456L13_2527 at 2794.985 kb on + strand, within PfGW456L13_2527 at 2794.985 kb on + strand, within PfGW456L13_2527 at 2794.985 kb on + strand, within PfGW456L13_2527 at 2794.985 kb on + strand, within PfGW456L13_2527 at 2795.002 kb on + strand, within PfGW456L13_2527 at 2795.003 kb on - strand, within PfGW456L13_2527 at 2795.062 kb on + strand, within PfGW456L13_2527 at 2795.062 kb on + strand, within PfGW456L13_2527 at 2795.062 kb on + strand, within PfGW456L13_2527 at 2795.062 kb on + strand, within PfGW456L13_2527 at 2795.063 kb on - strand, within PfGW456L13_2527 at 2795.063 kb on - strand, within PfGW456L13_2527 at 2795.063 kb on - strand, within PfGW456L13_2527 at 2795.063 kb on - strand, within PfGW456L13_2527 at 2795.146 kb on + strand, within PfGW456L13_2527 at 2795.147 kb on - strand, within PfGW456L13_2527 at 2795.147 kb on - strand, within PfGW456L13_2527 at 2795.231 kb on - strand at 2795.239 kb on + strand at 2795.295 kb on + strand at 2795.295 kb on + strand at 2795.508 kb on + strand, within PfGW456L13_2528 at 2795.509 kb on - strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.655 kb on - strand, within PfGW456L13_2528 at 2795.655 kb on - strand, within PfGW456L13_2528 at 2795.655 kb on - strand, within PfGW456L13_2528 at 2795.655 kb on - strand, within PfGW456L13_2528 at 2795.655 kb on - strand, within PfGW456L13_2528 at 2795.656 kb on + strand, within PfGW456L13_2528 at 2795.657 kb on - strand, within PfGW456L13_2528 at 2795.799 kb on - strand, within PfGW456L13_2528 at 2795.800 kb on + strand, within PfGW456L13_2528 at 2795.801 kb on - strand, within PfGW456L13_2528
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.004 mg/ml remove 2,793,672 + PfGW456L13_2526 0.26 +0.0 2,793,726 + PfGW456L13_2526 0.36 -0.2 2,793,985 + PfGW456L13_2526 0.86 -0.4 2,794,135 + +0.3 2,794,135 + -0.0 2,794,136 - +0.3 2,794,182 - -0.2 2,794,182 - +0.8 2,794,182 - +0.3 2,794,182 - +0.6 2,794,182 - +0.5 2,794,182 - -0.2 2,794,182 - -0.2 2,794,186 - +0.8 2,794,611 + +0.4 2,794,611 + +0.3 2,794,619 - -0.9 2,794,735 + PfGW456L13_2527 0.13 -0.8 2,794,736 - PfGW456L13_2527 0.13 +0.1 2,794,981 + PfGW456L13_2527 0.54 +0.3 2,794,981 + PfGW456L13_2527 0.54 +1.3 2,794,985 + PfGW456L13_2527 0.55 -0.2 2,794,985 + PfGW456L13_2527 0.55 -0.6 2,794,985 + PfGW456L13_2527 0.55 -1.1 2,794,985 + PfGW456L13_2527 0.55 +0.4 2,794,985 + PfGW456L13_2527 0.55 -1.6 2,794,985 + PfGW456L13_2527 0.55 +0.3 2,794,985 + PfGW456L13_2527 0.55 -0.5 2,794,985 + PfGW456L13_2527 0.55 -1.4 2,794,985 + PfGW456L13_2527 0.55 +0.1 2,794,985 + PfGW456L13_2527 0.55 -3.2 2,794,985 + PfGW456L13_2527 0.55 +0.3 2,794,985 + PfGW456L13_2527 0.55 -0.6 2,795,002 + PfGW456L13_2527 0.58 +0.5 2,795,003 - PfGW456L13_2527 0.58 +0.1 2,795,062 + PfGW456L13_2527 0.67 -1.1 2,795,062 + PfGW456L13_2527 0.67 +1.6 2,795,062 + PfGW456L13_2527 0.67 -0.0 2,795,062 + PfGW456L13_2527 0.67 -0.7 2,795,063 - PfGW456L13_2527 0.68 -0.8 2,795,063 - PfGW456L13_2527 0.68 -0.7 2,795,063 - PfGW456L13_2527 0.68 +0.1 2,795,063 - PfGW456L13_2527 0.68 +0.1 2,795,146 + PfGW456L13_2527 0.81 -0.6 2,795,147 - PfGW456L13_2527 0.82 -0.7 2,795,147 - PfGW456L13_2527 0.82 +0.2 2,795,231 - -0.2 2,795,239 + +0.0 2,795,295 + +0.6 2,795,295 + -0.6 2,795,508 + PfGW456L13_2528 0.18 +0.3 2,795,509 - PfGW456L13_2528 0.18 +0.2 2,795,654 + PfGW456L13_2528 0.30 +1.0 2,795,654 + PfGW456L13_2528 0.30 -1.4 2,795,654 + PfGW456L13_2528 0.30 +0.6 2,795,654 + PfGW456L13_2528 0.30 +0.6 2,795,654 + PfGW456L13_2528 0.30 +0.8 2,795,654 + PfGW456L13_2528 0.30 +0.2 2,795,654 + PfGW456L13_2528 0.30 -0.7 2,795,654 + PfGW456L13_2528 0.30 -0.5 2,795,654 + PfGW456L13_2528 0.30 +1.2 2,795,654 + PfGW456L13_2528 0.30 -0.4 2,795,654 + PfGW456L13_2528 0.30 +0.5 2,795,654 + PfGW456L13_2528 0.30 +0.5 2,795,654 + PfGW456L13_2528 0.30 +0.1 2,795,654 + PfGW456L13_2528 0.30 -0.8 2,795,655 - PfGW456L13_2528 0.30 -1.3 2,795,655 - PfGW456L13_2528 0.30 +0.3 2,795,655 - PfGW456L13_2528 0.30 -0.9 2,795,655 - PfGW456L13_2528 0.30 +0.2 2,795,655 - PfGW456L13_2528 0.30 +0.2 2,795,656 + PfGW456L13_2528 0.30 +1.2 2,795,657 - PfGW456L13_2528 0.30 +0.2 2,795,799 - PfGW456L13_2528 0.42 +0.4 2,795,800 + PfGW456L13_2528 0.42 -1.0 2,795,801 - PfGW456L13_2528 0.42 -0.2
Or see this region's nucleotide sequence