Strain Fitness in Pseudomonas sp. S08-1 around OH686_16260

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,402,705	-		OH686_16255	0.12	+0.4
3,402,713	+		OH686_16255	0.15	-0.4
3,402,713	+		OH686_16255	0.15	-0.8
3,402,714	-		OH686_16255	0.15	-0.4
3,402,714	-		OH686_16255	0.15	-0.2
3,402,714	-		OH686_16255	0.15	-0.5
3,402,714	-		OH686_16255	0.15	-1.0
3,402,714	-		OH686_16255	0.15	+0.5
3,402,887	+		OH686_16255	0.68	+0.5
3,402,887	+		OH686_16255	0.68	-0.0
3,402,887	+		OH686_16255	0.68	+0.5
3,402,887	+		OH686_16255	0.68	-0.1
3,402,887	+		OH686_16255	0.68	+0.9
3,402,888	-		OH686_16255	0.68	-0.2
3,402,888	-		OH686_16255	0.68	+0.1
3,402,888	-		OH686_16255	0.68	+1.0
3,402,888	-		OH686_16255	0.68	-1.0
3,403,248	+				+0.3
3,403,248	+				+0.0
3,403,248	+				-0.9
3,403,248	+				+0.9
3,403,248	+				+0.5
3,403,248	+				+0.2
3,403,248	+				+0.1
3,403,249	-				-0.5
3,403,249	-				-0.5
3,403,249	-				+0.5
3,403,249	-				-0.2
3,403,249	-				+0.8
3,403,249	-				+0.8
3,403,257	+				-0.3
3,403,257	+				-0.2
3,403,257	+				+0.6
3,403,257	+				+0.3
3,403,257	+				-1.1
3,403,257	+				-0.2
3,403,257	+				-1.5
3,403,257	+				+0.4
3,403,257	+				-1.0
3,403,257	+				+0.4
3,403,257	+				-0.2
3,403,257	+				-0.0
3,403,257	+				+0.3
3,403,257	+				+0.2
3,403,257	+				-0.5
3,403,257	+				+0.4
3,403,257	+				-1.7
3,403,257	+				-0.3
3,403,257	+				-0.9
3,403,258	-				-0.3
3,403,258	-				+0.5
3,403,258	-				-0.6
3,403,258	-				+0.4
3,403,258	-				+1.3
3,403,258	-				-0.6
3,403,258	-				-0.2
3,403,258	-				+1.1
3,403,258	-				-0.1
3,403,258	-				-0.0
3,403,258	-				+0.5
3,403,258	-				-0.4
3,403,258	-				+0.0
3,403,258	-				-0.2
3,403,258	-				+0.1
3,403,305	+				-0.6
3,403,305	+				+0.3
3,403,306	-				-0.9
3,403,353	+				-0.0
3,403,353	+				+0.6
3,403,353	+				+0.8
3,403,353	+				+1.0
3,403,353	+				+0.0
3,403,353	+				+0.5
3,403,354	-				-1.2
3,403,354	-				+0.5
3,403,354	-				-1.1
3,403,354	-				-0.1
3,403,354	-				+0.1
3,403,494	+		OH686_16260	0.12	+1.5
3,403,494	+		OH686_16260	0.12	-0.2
3,403,494	+		OH686_16260	0.12	+0.5
3,403,494	+		OH686_16260	0.12	+0.7
3,403,494	+		OH686_16260	0.12	-1.2
3,403,494	+		OH686_16260	0.12	-0.2
3,403,494	+		OH686_16260	0.12	+0.4
3,403,494	+		OH686_16260	0.12	+0.6
3,403,495	-		OH686_16260	0.12	+0.0
3,403,495	-		OH686_16260	0.12	+0.9
3,403,495	-		OH686_16260	0.12	+0.5
3,403,495	-		OH686_16260	0.12	-0.5
3,403,495	-		OH686_16260	0.12	+0.1
3,403,495	-		OH686_16260	0.12	-1.4
3,403,495	-		OH686_16260	0.12	-0.2
3,403,495	-		OH686_16260	0.12	-0.6
3,403,539	+		OH686_16260	0.14	+0.3
3,403,596	+		OH686_16260	0.17	-0.1
3,403,597	-		OH686_16260	0.17	-0.2
3,403,597	-		OH686_16260	0.17	-0.7
3,403,851	+		OH686_16260	0.28	+0.6
3,403,851	+		OH686_16260	0.28	-1.4
3,403,851	+		OH686_16260	0.28	-0.3
3,403,851	+		OH686_16260	0.28	+0.1
3,403,851	+		OH686_16260	0.28	+0.5
3,403,851	+		OH686_16260	0.28	+0.8
3,403,852	-		OH686_16260	0.28	+0.2
3,403,852	-		OH686_16260	0.28	+0.6
3,403,852	-		OH686_16260	0.28	+0.5
3,403,852	-		OH686_16260	0.28	-1.2
3,403,878	+		OH686_16260	0.29	+0.1
3,403,977	+		OH686_16260	0.33	+0.6
3,403,977	+		OH686_16260	0.33	+0.5
3,403,977	+		OH686_16260	0.33	+0.8
3,403,977	+		OH686_16260	0.33	+0.8
3,403,977	+		OH686_16260	0.33	-1.2
3,403,977	+		OH686_16260	0.33	+0.8
3,403,977	+		OH686_16260	0.33	-0.1
3,403,978	-		OH686_16260	0.33	-0.9
3,403,978	-		OH686_16260	0.33	+0.3
3,403,978	-		OH686_16260	0.33	+0.1
3,403,978	-		OH686_16260	0.33	+1.3
3,403,978	-		OH686_16260	0.33	-0.3
3,403,978	-		OH686_16260	0.33	+0.1
3,403,978	-		OH686_16260	0.33	+0.9
3,403,978	-		OH686_16260	0.33	-0.2
3,404,049	+		OH686_16260	0.36	+0.8
3,404,049	+		OH686_16260	0.36	+0.2
3,404,049	+		OH686_16260	0.36	-0.2
3,404,049	+		OH686_16260	0.36	+0.1
3,404,049	+		OH686_16260	0.36	-2.6
3,404,049	+		OH686_16260	0.36	+0.5
3,404,049	+		OH686_16260	0.36	-0.4
3,404,049	+		OH686_16260	0.36	+1.1
3,404,050	-		OH686_16260	0.36	-0.8
3,404,050	-		OH686_16260	0.36	+0.3
3,404,076	+		OH686_16260	0.38	+0.1
3,404,076	+		OH686_16260	0.38	+0.5
3,404,077	-		OH686_16260	0.38	+0.8
3,404,077	-		OH686_16260	0.38	-0.2
3,404,077	-		OH686_16260	0.38	+1.2
3,404,077	-		OH686_16260	0.38	-0.2
3,404,100	+		OH686_16260	0.39	+1.8
3,404,100	+		OH686_16260	0.39	+0.2
3,404,100	+		OH686_16260	0.39	+0.3
3,404,100	+		OH686_16260	0.39	-0.0
3,404,100	+		OH686_16260	0.39	+1.1
3,404,100	+		OH686_16260	0.39	-1.0
3,404,109	+		OH686_16260	0.39	-0.5
3,404,154	+		OH686_16260	0.41	+1.1
3,404,155	-		OH686_16260	0.41	-0.7
3,404,346	+		OH686_16260	0.49	-1.9
3,404,346	+		OH686_16260	0.49	-0.0
3,404,346	+		OH686_16260	0.49	-1.0
3,404,346	+		OH686_16260	0.49	-0.0
3,404,346	+		OH686_16260	0.49	-1.4
3,404,346	+		OH686_16260	0.49	+1.2
3,404,346	+		OH686_16260	0.49	-0.7
3,404,346	+		OH686_16260	0.49	+0.1
3,404,346	+		OH686_16260	0.49	+0.2
3,404,346	+		OH686_16260	0.49	-0.9
3,404,346	+		OH686_16260	0.49	-0.2
3,404,346	+		OH686_16260	0.49	-0.5
3,404,347	-		OH686_16260	0.49	-0.5
3,404,347	-		OH686_16260	0.49	+0.9
3,404,347	-		OH686_16260	0.49	-0.4
3,404,347	-		OH686_16260	0.49	-0.7
3,404,347	-		OH686_16260	0.49	-0.8
3,404,347	-		OH686_16260	0.49	-0.9
3,404,347	-		OH686_16260	0.49	-0.2
3,404,347	-		OH686_16260	0.49	+0.1
3,404,347	-		OH686_16260	0.49	-0.2
3,404,349	+		OH686_16260	0.49	-0.3
3,404,349	+		OH686_16260	0.49	+0.7
3,404,349	+		OH686_16260	0.49	+0.4
3,404,349	+		OH686_16260	0.49	-0.0
3,404,349	+		OH686_16260	0.49	+1.2
3,404,349	+		OH686_16260	0.49	-1.2
3,404,349	+		OH686_16260	0.49	-0.1
3,404,350	-		OH686_16260	0.49	+0.2
3,404,350	-		OH686_16260	0.49	+0.2
3,404,350	-		OH686_16260	0.49	-0.5
3,404,350	-		OH686_16260	0.49	+1.1
3,404,350	-		OH686_16260	0.49	-0.5
3,404,350	-		OH686_16260	0.49	-0.2
3,404,529	+		OH686_16260	0.57	-0.7
3,404,529	+		OH686_16260	0.57	-0.2
3,404,529	+		OH686_16260	0.57	+0.3
3,404,529	+		OH686_16260	0.57	-0.3
3,404,529	+		OH686_16260	0.57	+0.1
3,404,529	+		OH686_16260	0.57	-0.0
3,404,529	+		OH686_16260	0.57	-0.8
3,404,529	+		OH686_16260	0.57	-0.3
3,404,529	+		OH686_16260	0.57	+0.5
3,404,529	+		OH686_16260	0.57	-0.4
3,404,529	+		OH686_16260	0.57	+0.5
3,404,529	+		OH686_16260	0.57	-0.6
3,404,530	-		OH686_16260	0.57	+0.4
3,404,530	-		OH686_16260	0.57	-0.5
3,404,530	-		OH686_16260	0.57	-1.0
3,404,530	-		OH686_16260	0.57	-0.3
3,404,720	+		OH686_16260	0.65	-0.7
3,404,720	+		OH686_16260	0.65	+1.0
3,404,720	+		OH686_16260	0.65	+0.2
3,404,720	+		OH686_16260	0.65	+0.5
3,404,721	-		OH686_16260	0.65	-0.1
3,404,721	-		OH686_16260	0.65	+0.3
3,404,949	+		OH686_16260	0.75	+1.3
3,404,949	+		OH686_16260	0.75	-0.7
3,404,950	-		OH686_16260	0.75	-0.4
3,404,950	-		OH686_16260	0.75	-0.3
3,405,003	+		OH686_16260	0.78	-1.4
3,405,003	+		OH686_16260	0.78	+1.0
3,405,003	+		OH686_16260	0.78	-1.0
3,405,003	+		OH686_16260	0.78	-0.5
3,405,004	-		OH686_16260	0.78	-0.6
3,405,004	-		OH686_16260	0.78	-0.9
3,405,009	+		OH686_16260	0.78	-1.7
3,405,009	+		OH686_16260	0.78	+0.3
3,405,009	+		OH686_16260	0.78	+1.4
3,405,010	-		OH686_16260	0.78	+0.4
3,405,010	-		OH686_16260	0.78	+0.2
3,405,010	-		OH686_16260	0.78	+0.1
3,405,294	+				-0.2
3,405,294	+				+0.1
3,405,294	+				+0.6
3,405,294	+				-0.1
3,405,294	+				+0.6
3,405,294	+				-0.3
3,405,294	+				-0.2
3,405,294	+				+0.1
3,405,295	-				+0.5
3,405,295	-				+0.5
3,405,295	-				-0.3
3,405,295	-				+0.6
3,405,295	-				+0.9
3,405,295	-				+0.5
3,405,647	+				-0.6
3,405,647	+				+1.1
3,405,647	+				+0.7
3,405,647	+				-1.1
3,405,648	-				-0.4
3,405,648	-				-0.5
3,405,648	-				-2.1
3,405,675	+				-0.3
3,405,675	+				+1.3
3,405,675	+				+0.8
3,405,676	-				-0.2
3,405,676	-				+0.2
3,405,676	-				-1.5
3,405,676	-				-0.3
3,405,676	-				+0.6
3,405,826	+		OH686_16265	0.34	-1.0
3,405,826	+		OH686_16265	0.34	-1.0
3,405,826	+		OH686_16265	0.34	+0.1
3,405,827	-		OH686_16265	0.34	+0.0
3,405,935	+		OH686_16265	0.66	-0.4
3,405,935	+		OH686_16265	0.66	-2.2
3,405,935	+		OH686_16265	0.66	-1.0
3,405,936	-		OH686_16265	0.66	-0.6
3,406,028	+				-0.3
3,406,029	-				+0.8
3,406,029	-				-1.1
3,406,029	-				-0.3
3,406,106	+				+0.9
3,406,107	-				+0.1
3,406,107	-				+1.4
3,406,107	-				-0.6
3,406,160	+				+0.8
3,406,160	+				-0.0
3,406,207	-				-0.0
3,406,208	+				+1.3
3,406,208	+				+1.1
3,406,208	+				+0.1
3,406,209	-				-0.6
3,406,269	+				+0.5
3,406,269	+				-0.7
3,406,269	+				+0.1
3,406,269	+				+0.1
3,406,269	+				-0.5
3,406,269	+				-0.5
3,406,269	+				+0.8
3,406,270	-				+0.3
3,406,270	-				-0.4
3,406,270	-				-0.2
3,406,270	-				-0.4
3,406,270	-				+0.3
3,406,270	-				+0.3
3,406,270	-				-0.1
3,406,299	+		OH686_16270	0.12	-0.5
3,406,299	+		OH686_16270	0.12	+0.5
3,406,299	+		OH686_16270	0.12	+0.1
3,406,299	+		OH686_16270	0.12	-1.6
3,406,300	-		OH686_16270	0.12	+0.3
3,406,300	-		OH686_16270	0.12	+0.5
3,406,300	-		OH686_16270	0.12	-0.5
3,406,300	-		OH686_16270	0.12	-0.2
3,406,300	-		OH686_16270	0.12	+0.6
3,406,373	+		OH686_16270	0.26	-1.0
3,406,373	+		OH686_16270	0.26	+0.3
3,406,373	+		OH686_16270	0.26	-0.3
3,406,373	+		OH686_16270	0.26	-1.2
3,406,373	+		OH686_16270	0.26	-1.8
3,406,374	-		OH686_16270	0.27	-0.1
3,406,374	-		OH686_16270	0.27	-0.0
3,406,374	-		OH686_16270	0.27	+0.2
3,406,374	-		OH686_16270	0.27	-0.2