Experiment: m.b. Chlorite 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4495 and Echvi_4496 are separated by 494 nucleotides Echvi_4496 and Echvi_4497 overlap by 53 nucleotides Echvi_4497 and Echvi_4498 are separated by 52 nucleotides
Echvi_4495: Echvi_4495 - Rrf2 family protein, at 5,373,989 to 5,374,423
_4495
Echvi_4496: Echvi_4496 - Short-chain dehydrogenases of various substrate specificities, at 5,374,918 to 5,375,550
_4496
Echvi_4497: Echvi_4497 - hypothetical protein, at 5,375,498 to 5,376,436
_4497
Echvi_4498: Echvi_4498 - hypothetical protein, at 5,376,489 to 5,376,629
_4498
Position (kb) 5374
5375
5376 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5373.985 kb on + strand at 5373.985 kb on + strand at 5374.019 kb on + strand at 5374.019 kb on + strand at 5374.040 kb on + strand, within Echvi_4495 at 5374.075 kb on + strand, within Echvi_4495 at 5374.080 kb on - strand, within Echvi_4495 at 5374.080 kb on - strand, within Echvi_4495 at 5374.153 kb on + strand, within Echvi_4495 at 5374.158 kb on - strand, within Echvi_4495 at 5374.158 kb on - strand, within Echvi_4495 at 5374.158 kb on - strand, within Echvi_4495 at 5374.163 kb on - strand, within Echvi_4495 at 5374.193 kb on + strand, within Echvi_4495 at 5374.202 kb on - strand, within Echvi_4495 at 5374.204 kb on + strand, within Echvi_4495 at 5374.267 kb on + strand, within Echvi_4495 at 5374.319 kb on + strand, within Echvi_4495 at 5374.319 kb on + strand, within Echvi_4495 at 5374.613 kb on - strand at 5374.627 kb on + strand at 5374.627 kb on + strand at 5374.628 kb on - strand at 5374.628 kb on - strand at 5374.628 kb on - strand at 5374.628 kb on - strand at 5374.673 kb on + strand at 5374.674 kb on - strand at 5374.707 kb on + strand at 5374.708 kb on - strand at 5374.744 kb on - strand at 5374.778 kb on + strand at 5374.779 kb on - strand at 5374.787 kb on + strand at 5374.788 kb on - strand at 5374.788 kb on - strand at 5374.788 kb on - strand at 5374.802 kb on - strand at 5374.802 kb on - strand at 5374.802 kb on - strand at 5374.806 kb on - strand at 5374.807 kb on + strand at 5374.808 kb on - strand at 5374.808 kb on - strand at 5374.820 kb on - strand at 5374.821 kb on + strand at 5374.822 kb on - strand at 5374.822 kb on - strand at 5374.866 kb on - strand at 5374.866 kb on - strand at 5374.916 kb on + strand at 5374.919 kb on + strand at 5374.920 kb on - strand at 5374.923 kb on - strand at 5374.936 kb on - strand at 5374.979 kb on + strand at 5374.980 kb on - strand at 5375.004 kb on + strand, within Echvi_4496 at 5375.007 kb on + strand at 5375.008 kb on - strand, within Echvi_4496 at 5375.012 kb on - strand, within Echvi_4496 at 5375.012 kb on - strand, within Echvi_4496 at 5375.026 kb on + strand, within Echvi_4496 at 5375.054 kb on + strand, within Echvi_4496 at 5375.146 kb on - strand, within Echvi_4496 at 5375.146 kb on - strand, within Echvi_4496 at 5375.211 kb on + strand, within Echvi_4496 at 5375.279 kb on + strand, within Echvi_4496 at 5375.279 kb on + strand, within Echvi_4496 at 5375.279 kb on + strand, within Echvi_4496 at 5375.280 kb on - strand, within Echvi_4496 at 5375.280 kb on - strand, within Echvi_4496 at 5375.280 kb on - strand, within Echvi_4496 at 5375.280 kb on - strand, within Echvi_4496 at 5375.281 kb on + strand, within Echvi_4496 at 5375.281 kb on + strand, within Echvi_4496 at 5375.281 kb on + strand, within Echvi_4496 at 5375.281 kb on + strand, within Echvi_4496 at 5375.281 kb on + strand, within Echvi_4496 at 5375.281 kb on + strand, within Echvi_4496 at 5375.281 kb on + strand, within Echvi_4496 at 5375.334 kb on + strand, within Echvi_4496 at 5375.335 kb on - strand, within Echvi_4496 at 5375.361 kb on - strand, within Echvi_4496 at 5375.366 kb on - strand, within Echvi_4496 at 5375.398 kb on - strand, within Echvi_4496 at 5375.404 kb on - strand, within Echvi_4496 at 5375.404 kb on - strand, within Echvi_4496 at 5375.419 kb on + strand, within Echvi_4496 at 5375.420 kb on - strand, within Echvi_4496 at 5375.420 kb on - strand, within Echvi_4496 at 5375.455 kb on + strand, within Echvi_4496 at 5375.456 kb on - strand, within Echvi_4496 at 5375.456 kb on - strand, within Echvi_4496 at 5375.456 kb on - strand, within Echvi_4496 at 5375.459 kb on - strand at 5375.459 kb on - strand, within Echvi_4496 at 5375.459 kb on - strand, within Echvi_4496 at 5375.459 kb on - strand, within Echvi_4496 at 5375.463 kb on + strand, within Echvi_4496 at 5375.463 kb on + strand, within Echvi_4496 at 5375.464 kb on - strand, within Echvi_4496 at 5375.464 kb on - strand, within Echvi_4496 at 5375.464 kb on - strand, within Echvi_4496 at 5375.585 kb on - strand at 5375.586 kb on + strand at 5375.628 kb on - strand, within Echvi_4497 at 5375.628 kb on - strand, within Echvi_4497 at 5375.632 kb on + strand, within Echvi_4497 at 5375.633 kb on - strand, within Echvi_4497 at 5375.633 kb on - strand, within Echvi_4497 at 5375.633 kb on - strand, within Echvi_4497 at 5375.637 kb on + strand, within Echvi_4497 at 5375.637 kb on + strand, within Echvi_4497 at 5375.657 kb on + strand, within Echvi_4497 at 5375.662 kb on + strand, within Echvi_4497 at 5375.738 kb on + strand, within Echvi_4497 at 5375.738 kb on + strand, within Echvi_4497 at 5375.739 kb on - strand, within Echvi_4497 at 5375.739 kb on - strand, within Echvi_4497 at 5375.740 kb on + strand, within Echvi_4497 at 5375.741 kb on - strand, within Echvi_4497 at 5375.773 kb on + strand, within Echvi_4497 at 5375.774 kb on - strand, within Echvi_4497 at 5375.813 kb on + strand, within Echvi_4497 at 5375.864 kb on - strand, within Echvi_4497 at 5375.971 kb on + strand, within Echvi_4497 at 5375.971 kb on + strand at 5375.971 kb on + strand, within Echvi_4497 at 5376.066 kb on - strand, within Echvi_4497 at 5376.080 kb on - strand, within Echvi_4497 at 5376.080 kb on - strand, within Echvi_4497 at 5376.239 kb on - strand, within Echvi_4497 at 5376.450 kb on + strand at 5376.496 kb on - strand at 5376.527 kb on + strand, within Echvi_4498 at 5376.527 kb on + strand, within Echvi_4498 at 5376.527 kb on + strand, within Echvi_4498 at 5376.527 kb on + strand, within Echvi_4498 at 5376.527 kb on + strand, within Echvi_4498 at 5376.527 kb on + strand, within Echvi_4498 at 5376.527 kb on + strand, within Echvi_4498 at 5376.529 kb on + strand, within Echvi_4498 at 5376.529 kb on + strand, within Echvi_4498 at 5376.529 kb on + strand, within Echvi_4498 at 5376.529 kb on + strand, within Echvi_4498
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.15 mM remove 5,373,985 + -0.2 5,373,985 + +0.6 5,374,019 + -0.1 5,374,019 + +0.1 5,374,040 + Echvi_4495 0.12 +0.5 5,374,075 + Echvi_4495 0.20 +0.2 5,374,080 - Echvi_4495 0.21 -0.1 5,374,080 - Echvi_4495 0.21 +0.1 5,374,153 + Echvi_4495 0.38 -0.6 5,374,158 - Echvi_4495 0.39 +0.2 5,374,158 - Echvi_4495 0.39 +0.9 5,374,158 - Echvi_4495 0.39 +0.7 5,374,163 - Echvi_4495 0.40 -0.2 5,374,193 + Echvi_4495 0.47 -0.5 5,374,202 - Echvi_4495 0.49 +0.4 5,374,204 + Echvi_4495 0.49 -0.7 5,374,267 + Echvi_4495 0.64 +0.5 5,374,319 + Echvi_4495 0.76 +0.8 5,374,319 + Echvi_4495 0.76 +0.3 5,374,613 - -1.4 5,374,627 + +0.2 5,374,627 + +0.8 5,374,628 - +0.3 5,374,628 - +0.3 5,374,628 - +1.9 5,374,628 - -1.1 5,374,673 + -0.1 5,374,674 - -1.0 5,374,707 + +0.0 5,374,708 - +0.7 5,374,744 - -0.2 5,374,778 + -0.2 5,374,779 - +0.9 5,374,787 + +1.6 5,374,788 - +0.6 5,374,788 - -0.0 5,374,788 - +0.0 5,374,802 - -0.7 5,374,802 - +0.2 5,374,802 - -0.4 5,374,806 - +0.4 5,374,807 + -0.5 5,374,808 - +0.2 5,374,808 - +1.0 5,374,820 - -1.6 5,374,821 + -1.7 5,374,822 - -0.4 5,374,822 - +2.5 5,374,866 - -0.4 5,374,866 - +0.1 5,374,916 + -0.4 5,374,919 + -0.4 5,374,920 - +0.6 5,374,923 - -0.9 5,374,936 - -0.5 5,374,979 + +0.9 5,374,980 - +0.0 5,375,004 + Echvi_4496 0.14 -1.8 5,375,007 + -0.1 5,375,008 - Echvi_4496 0.14 -0.8 5,375,012 - Echvi_4496 0.15 -1.3 5,375,012 - Echvi_4496 0.15 +0.1 5,375,026 + Echvi_4496 0.17 -0.0 5,375,054 + Echvi_4496 0.21 +0.6 5,375,146 - Echvi_4496 0.36 +0.2 5,375,146 - Echvi_4496 0.36 -0.1 5,375,211 + Echvi_4496 0.46 -2.0 5,375,279 + Echvi_4496 0.57 -0.5 5,375,279 + Echvi_4496 0.57 +0.3 5,375,279 + Echvi_4496 0.57 -0.3 5,375,280 - Echvi_4496 0.57 +0.1 5,375,280 - Echvi_4496 0.57 -0.6 5,375,280 - Echvi_4496 0.57 -1.2 5,375,280 - Echvi_4496 0.57 +0.7 5,375,281 + Echvi_4496 0.57 -0.8 5,375,281 + Echvi_4496 0.57 -0.3 5,375,281 + Echvi_4496 0.57 -1.3 5,375,281 + Echvi_4496 0.57 -1.0 5,375,281 + Echvi_4496 0.57 -2.6 5,375,281 + Echvi_4496 0.57 -0.7 5,375,281 + Echvi_4496 0.57 +0.5 5,375,334 + Echvi_4496 0.66 -0.5 5,375,335 - Echvi_4496 0.66 -0.1 5,375,361 - Echvi_4496 0.70 +0.5 5,375,366 - Echvi_4496 0.71 -1.9 5,375,398 - Echvi_4496 0.76 +0.4 5,375,404 - Echvi_4496 0.77 +0.7 5,375,404 - Echvi_4496 0.77 -1.3 5,375,419 + Echvi_4496 0.79 -0.1 5,375,420 - Echvi_4496 0.79 -0.9 5,375,420 - Echvi_4496 0.79 -0.9 5,375,455 + Echvi_4496 0.85 -2.1 5,375,456 - Echvi_4496 0.85 -0.8 5,375,456 - Echvi_4496 0.85 -1.0 5,375,456 - Echvi_4496 0.85 +0.2 5,375,459 - +1.5 5,375,459 - Echvi_4496 0.85 -0.7 5,375,459 - Echvi_4496 0.85 -2.0 5,375,459 - Echvi_4496 0.85 -0.5 5,375,463 + Echvi_4496 0.86 -0.8 5,375,463 + Echvi_4496 0.86 -0.2 5,375,464 - Echvi_4496 0.86 -1.3 5,375,464 - Echvi_4496 0.86 -0.7 5,375,464 - Echvi_4496 0.86 +0.5 5,375,585 - -0.7 5,375,586 + +1.5 5,375,628 - Echvi_4497 0.14 -2.0 5,375,628 - Echvi_4497 0.14 +0.1 5,375,632 + Echvi_4497 0.14 +0.3 5,375,633 - Echvi_4497 0.14 +0.0 5,375,633 - Echvi_4497 0.14 +1.7 5,375,633 - Echvi_4497 0.14 -0.4 5,375,637 + Echvi_4497 0.15 -1.0 5,375,637 + Echvi_4497 0.15 +0.3 5,375,657 + Echvi_4497 0.17 -0.2 5,375,662 + Echvi_4497 0.17 -0.8 5,375,738 + Echvi_4497 0.26 +0.1 5,375,738 + Echvi_4497 0.26 -0.9 5,375,739 - Echvi_4497 0.26 -0.1 5,375,739 - Echvi_4497 0.26 +0.7 5,375,740 + Echvi_4497 0.26 +1.3 5,375,741 - Echvi_4497 0.26 -0.5 5,375,773 + Echvi_4497 0.29 +0.9 5,375,774 - Echvi_4497 0.29 +0.3 5,375,813 + Echvi_4497 0.34 +0.9 5,375,864 - Echvi_4497 0.39 -0.5 5,375,971 + Echvi_4497 0.50 -0.5 5,375,971 + +0.5 5,375,971 + Echvi_4497 0.50 -0.6 5,376,066 - Echvi_4497 0.60 +0.4 5,376,080 - Echvi_4497 0.62 +0.7 5,376,080 - Echvi_4497 0.62 -1.3 5,376,239 - Echvi_4497 0.79 +0.5 5,376,450 + -0.0 5,376,496 - -0.0 5,376,527 + Echvi_4498 0.27 -0.2 5,376,527 + Echvi_4498 0.27 -1.4 5,376,527 + Echvi_4498 0.27 +0.3 5,376,527 + Echvi_4498 0.27 -1.1 5,376,527 + Echvi_4498 0.27 +0.4 5,376,527 + Echvi_4498 0.27 -0.6 5,376,527 + Echvi_4498 0.27 +1.5 5,376,529 + Echvi_4498 0.28 +0.3 5,376,529 + Echvi_4498 0.28 +0.4 5,376,529 + Echvi_4498 0.28 +0.1 5,376,529 + Echvi_4498 0.28 +0.3
Or see this region's nucleotide sequence