Experiment: m.b. Chlorite 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3461 and Echvi_3462 are separated by 111 nucleotides Echvi_3462 and Echvi_3463 are separated by 55 nucleotides Echvi_3463 and Echvi_3464 are separated by 18 nucleotides Echvi_3464 and Echvi_3465 are separated by 2 nucleotides
Echvi_3461: Echvi_3461 - hypothetical protein, at 4,096,905 to 4,101,266
_3461
Echvi_3462: Echvi_3462 - hypothetical protein, at 4,101,378 to 4,101,992
_3462
Echvi_3463: Echvi_3463 - hypothetical protein, at 4,102,048 to 4,102,593
_3463
Echvi_3464: Echvi_3464 - OmpW family., at 4,102,612 to 4,103,217
_3464
Echvi_3465: Echvi_3465 - hypothetical protein, at 4,103,220 to 4,103,897
_3465
Position (kb)
4102
4103 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4101.098 kb on + strand at 4101.098 kb on + strand at 4101.098 kb on + strand at 4101.112 kb on + strand at 4101.112 kb on + strand at 4101.119 kb on + strand at 4101.120 kb on - strand at 4101.129 kb on - strand at 4101.139 kb on + strand at 4101.140 kb on - strand at 4101.143 kb on + strand at 4101.143 kb on + strand at 4101.143 kb on + strand at 4101.167 kb on - strand at 4101.293 kb on - strand at 4101.295 kb on + strand at 4101.427 kb on + strand at 4101.450 kb on + strand, within Echvi_3462 at 4101.450 kb on + strand, within Echvi_3462 at 4101.489 kb on + strand, within Echvi_3462 at 4101.504 kb on + strand, within Echvi_3462 at 4101.550 kb on + strand, within Echvi_3462 at 4101.550 kb on + strand, within Echvi_3462 at 4101.550 kb on + strand, within Echvi_3462 at 4101.550 kb on + strand, within Echvi_3462 at 4101.550 kb on + strand, within Echvi_3462 at 4101.551 kb on - strand, within Echvi_3462 at 4101.551 kb on - strand, within Echvi_3462 at 4101.551 kb on - strand, within Echvi_3462 at 4101.557 kb on + strand, within Echvi_3462 at 4101.558 kb on - strand, within Echvi_3462 at 4101.569 kb on - strand, within Echvi_3462 at 4101.571 kb on + strand, within Echvi_3462 at 4101.572 kb on - strand, within Echvi_3462 at 4101.583 kb on + strand, within Echvi_3462 at 4101.584 kb on - strand, within Echvi_3462 at 4101.584 kb on - strand, within Echvi_3462 at 4101.584 kb on - strand, within Echvi_3462 at 4101.586 kb on + strand, within Echvi_3462 at 4101.613 kb on + strand, within Echvi_3462 at 4101.613 kb on + strand, within Echvi_3462 at 4101.617 kb on - strand, within Echvi_3462 at 4101.634 kb on + strand, within Echvi_3462 at 4101.643 kb on + strand, within Echvi_3462 at 4101.643 kb on + strand, within Echvi_3462 at 4101.734 kb on + strand, within Echvi_3462 at 4101.752 kb on + strand, within Echvi_3462 at 4101.753 kb on - strand, within Echvi_3462 at 4101.782 kb on - strand, within Echvi_3462 at 4101.805 kb on - strand, within Echvi_3462 at 4101.813 kb on + strand, within Echvi_3462 at 4101.818 kb on + strand, within Echvi_3462 at 4101.819 kb on - strand, within Echvi_3462 at 4101.819 kb on - strand, within Echvi_3462 at 4101.900 kb on + strand, within Echvi_3462 at 4101.900 kb on + strand, within Echvi_3462 at 4101.901 kb on - strand, within Echvi_3462 at 4101.924 kb on + strand, within Echvi_3462 at 4101.925 kb on - strand, within Echvi_3462 at 4101.925 kb on - strand, within Echvi_3462 at 4101.925 kb on - strand, within Echvi_3462 at 4102.006 kb on + strand at 4102.015 kb on - strand at 4102.015 kb on - strand at 4102.049 kb on + strand at 4102.049 kb on + strand at 4102.050 kb on - strand at 4102.050 kb on - strand at 4102.050 kb on - strand at 4102.050 kb on - strand at 4102.055 kb on - strand at 4102.063 kb on - strand at 4102.125 kb on + strand, within Echvi_3463 at 4102.185 kb on + strand, within Echvi_3463 at 4102.186 kb on - strand, within Echvi_3463 at 4102.201 kb on - strand, within Echvi_3463 at 4102.201 kb on - strand, within Echvi_3463 at 4102.202 kb on + strand, within Echvi_3463 at 4102.203 kb on - strand, within Echvi_3463 at 4102.203 kb on - strand, within Echvi_3463 at 4102.256 kb on + strand, within Echvi_3463 at 4102.256 kb on + strand, within Echvi_3463 at 4102.257 kb on - strand, within Echvi_3463 at 4102.257 kb on - strand, within Echvi_3463 at 4102.323 kb on + strand, within Echvi_3463 at 4102.458 kb on - strand, within Echvi_3463 at 4102.564 kb on + strand at 4102.565 kb on - strand at 4102.565 kb on - strand at 4102.569 kb on + strand at 4102.569 kb on + strand at 4102.569 kb on + strand at 4102.569 kb on + strand at 4102.570 kb on - strand at 4102.570 kb on - strand at 4102.570 kb on - strand at 4102.571 kb on + strand at 4102.571 kb on + strand at 4102.571 kb on + strand at 4102.571 kb on + strand at 4102.571 kb on + strand at 4102.571 kb on + strand at 4102.571 kb on + strand at 4102.572 kb on - strand at 4102.572 kb on - strand at 4102.572 kb on - strand at 4102.572 kb on - strand at 4102.572 kb on - strand at 4102.572 kb on - strand at 4102.572 kb on - strand at 4102.572 kb on - strand at 4102.572 kb on - strand at 4102.577 kb on + strand at 4102.578 kb on - strand at 4102.596 kb on + strand at 4102.597 kb on - strand at 4102.597 kb on - strand at 4102.638 kb on + strand at 4102.639 kb on - strand at 4102.683 kb on - strand, within Echvi_3464 at 4102.713 kb on - strand, within Echvi_3464 at 4102.782 kb on - strand, within Echvi_3464 at 4102.811 kb on + strand, within Echvi_3464 at 4102.811 kb on + strand, within Echvi_3464 at 4102.811 kb on + strand, within Echvi_3464 at 4102.811 kb on + strand, within Echvi_3464 at 4102.811 kb on + strand, within Echvi_3464 at 4102.811 kb on + strand, within Echvi_3464 at 4102.811 kb on + strand, within Echvi_3464 at 4102.812 kb on - strand, within Echvi_3464 at 4102.812 kb on - strand, within Echvi_3464 at 4102.812 kb on - strand, within Echvi_3464 at 4102.834 kb on + strand, within Echvi_3464 at 4102.834 kb on + strand, within Echvi_3464 at 4102.834 kb on + strand, within Echvi_3464 at 4102.835 kb on - strand, within Echvi_3464 at 4102.835 kb on - strand, within Echvi_3464 at 4102.835 kb on - strand, within Echvi_3464 at 4102.835 kb on - strand, within Echvi_3464 at 4102.835 kb on - strand, within Echvi_3464 at 4102.837 kb on - strand, within Echvi_3464 at 4102.838 kb on + strand, within Echvi_3464 at 4102.838 kb on + strand, within Echvi_3464 at 4102.838 kb on + strand, within Echvi_3464 at 4102.839 kb on - strand, within Echvi_3464 at 4102.846 kb on - strand, within Echvi_3464 at 4102.865 kb on - strand, within Echvi_3464 at 4102.865 kb on - strand, within Echvi_3464 at 4102.869 kb on - strand, within Echvi_3464 at 4102.872 kb on - strand, within Echvi_3464 at 4102.872 kb on - strand, within Echvi_3464 at 4102.872 kb on - strand, within Echvi_3464 at 4102.875 kb on + strand, within Echvi_3464 at 4102.875 kb on + strand, within Echvi_3464 at 4102.876 kb on - strand, within Echvi_3464 at 4102.876 kb on - strand, within Echvi_3464 at 4102.876 kb on - strand, within Echvi_3464 at 4102.901 kb on - strand, within Echvi_3464 at 4102.907 kb on + strand, within Echvi_3464 at 4102.907 kb on + strand, within Echvi_3464 at 4102.908 kb on - strand, within Echvi_3464 at 4102.908 kb on - strand, within Echvi_3464 at 4102.911 kb on + strand, within Echvi_3464 at 4102.911 kb on + strand, within Echvi_3464 at 4102.911 kb on + strand, within Echvi_3464 at 4102.913 kb on + strand, within Echvi_3464 at 4102.978 kb on + strand, within Echvi_3464 at 4102.978 kb on + strand, within Echvi_3464 at 4102.979 kb on - strand, within Echvi_3464 at 4102.988 kb on + strand, within Echvi_3464 at 4102.989 kb on - strand, within Echvi_3464 at 4103.010 kb on + strand, within Echvi_3464 at 4103.011 kb on - strand, within Echvi_3464 at 4103.011 kb on - strand, within Echvi_3464 at 4103.011 kb on - strand, within Echvi_3464 at 4103.027 kb on + strand, within Echvi_3464 at 4103.028 kb on - strand, within Echvi_3464 at 4103.048 kb on + strand, within Echvi_3464 at 4103.048 kb on + strand, within Echvi_3464 at 4103.048 kb on + strand, within Echvi_3464 at 4103.067 kb on + strand, within Echvi_3464 at 4103.085 kb on + strand, within Echvi_3464 at 4103.086 kb on - strand, within Echvi_3464 at 4103.087 kb on + strand, within Echvi_3464 at 4103.087 kb on + strand, within Echvi_3464 at 4103.088 kb on - strand, within Echvi_3464 at 4103.123 kb on + strand, within Echvi_3464 at 4103.124 kb on - strand, within Echvi_3464 at 4103.180 kb on - strand at 4103.194 kb on - strand at 4103.221 kb on + strand at 4103.388 kb on + strand, within Echvi_3465 at 4103.388 kb on + strand, within Echvi_3465 at 4103.388 kb on + strand, within Echvi_3465 at 4103.425 kb on + strand, within Echvi_3465 at 4103.425 kb on + strand, within Echvi_3465 at 4103.427 kb on + strand, within Echvi_3465 at 4103.427 kb on + strand, within Echvi_3465 at 4103.427 kb on + strand, within Echvi_3465 at 4103.427 kb on + strand, within Echvi_3465 at 4103.428 kb on - strand, within Echvi_3465 at 4103.428 kb on - strand, within Echvi_3465 at 4103.428 kb on - strand, within Echvi_3465 at 4103.458 kb on + strand, within Echvi_3465 at 4103.459 kb on - strand, within Echvi_3465 at 4103.462 kb on - strand, within Echvi_3465 at 4103.467 kb on + strand, within Echvi_3465 at 4103.468 kb on - strand, within Echvi_3465 at 4103.556 kb on - strand, within Echvi_3465 at 4103.556 kb on - strand, within Echvi_3465 at 4103.556 kb on - strand, within Echvi_3465 at 4103.575 kb on - strand, within Echvi_3465 at 4103.580 kb on + strand, within Echvi_3465 at 4103.581 kb on - strand, within Echvi_3465 at 4103.581 kb on - strand, within Echvi_3465
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.15 mM remove 4,101,098 + +0.9 4,101,098 + -0.2 4,101,098 + +0.9 4,101,112 + +0.2 4,101,112 + -0.2 4,101,119 + +0.2 4,101,120 - +1.6 4,101,129 - -1.7 4,101,139 + -0.5 4,101,140 - -0.3 4,101,143 + -0.2 4,101,143 + +0.2 4,101,143 + +0.2 4,101,167 - +0.7 4,101,293 - -1.4 4,101,295 + +0.4 4,101,427 + -0.1 4,101,450 + Echvi_3462 0.12 +2.3 4,101,450 + Echvi_3462 0.12 -1.3 4,101,489 + Echvi_3462 0.18 -1.2 4,101,504 + Echvi_3462 0.20 -0.0 4,101,550 + Echvi_3462 0.28 +0.5 4,101,550 + Echvi_3462 0.28 -0.2 4,101,550 + Echvi_3462 0.28 +0.0 4,101,550 + Echvi_3462 0.28 -0.5 4,101,550 + Echvi_3462 0.28 -0.7 4,101,551 - Echvi_3462 0.28 +1.6 4,101,551 - Echvi_3462 0.28 -0.4 4,101,551 - Echvi_3462 0.28 -0.1 4,101,557 + Echvi_3462 0.29 -0.5 4,101,558 - Echvi_3462 0.29 +0.7 4,101,569 - Echvi_3462 0.31 +0.1 4,101,571 + Echvi_3462 0.31 -0.9 4,101,572 - Echvi_3462 0.32 +0.5 4,101,583 + Echvi_3462 0.33 -1.7 4,101,584 - Echvi_3462 0.33 -0.1 4,101,584 - Echvi_3462 0.33 -0.1 4,101,584 - Echvi_3462 0.33 -0.9 4,101,586 + Echvi_3462 0.34 +0.3 4,101,613 + Echvi_3462 0.38 +0.7 4,101,613 + Echvi_3462 0.38 +0.8 4,101,617 - Echvi_3462 0.39 +0.3 4,101,634 + Echvi_3462 0.42 +0.4 4,101,643 + Echvi_3462 0.43 -0.7 4,101,643 + Echvi_3462 0.43 -0.4 4,101,734 + Echvi_3462 0.58 -0.2 4,101,752 + Echvi_3462 0.61 -0.7 4,101,753 - Echvi_3462 0.61 +0.3 4,101,782 - Echvi_3462 0.66 +0.4 4,101,805 - Echvi_3462 0.69 -0.0 4,101,813 + Echvi_3462 0.71 -0.5 4,101,818 + Echvi_3462 0.72 +0.1 4,101,819 - Echvi_3462 0.72 +0.2 4,101,819 - Echvi_3462 0.72 +0.3 4,101,900 + Echvi_3462 0.85 +0.7 4,101,900 + Echvi_3462 0.85 +0.9 4,101,901 - Echvi_3462 0.85 -0.8 4,101,924 + Echvi_3462 0.89 +0.1 4,101,925 - Echvi_3462 0.89 -0.2 4,101,925 - Echvi_3462 0.89 -0.8 4,101,925 - Echvi_3462 0.89 -3.1 4,102,006 + +0.8 4,102,015 - -0.3 4,102,015 - -0.2 4,102,049 + +2.5 4,102,049 + +0.5 4,102,050 - -0.5 4,102,050 - +0.0 4,102,050 - +1.1 4,102,050 - +0.1 4,102,055 - -0.8 4,102,063 - +0.1 4,102,125 + Echvi_3463 0.14 +0.4 4,102,185 + Echvi_3463 0.25 -0.9 4,102,186 - Echvi_3463 0.25 -0.3 4,102,201 - Echvi_3463 0.28 -1.0 4,102,201 - Echvi_3463 0.28 +0.5 4,102,202 + Echvi_3463 0.28 -0.3 4,102,203 - Echvi_3463 0.28 -0.5 4,102,203 - Echvi_3463 0.28 -1.1 4,102,256 + Echvi_3463 0.38 -1.0 4,102,256 + Echvi_3463 0.38 -1.6 4,102,257 - Echvi_3463 0.38 -0.5 4,102,257 - Echvi_3463 0.38 -1.4 4,102,323 + Echvi_3463 0.50 +0.0 4,102,458 - Echvi_3463 0.75 -0.8 4,102,564 + -0.3 4,102,565 - +0.7 4,102,565 - +0.3 4,102,569 + +0.2 4,102,569 + +0.7 4,102,569 + -0.6 4,102,569 + +0.5 4,102,570 - -0.0 4,102,570 - -0.7 4,102,570 - -0.5 4,102,571 + -0.2 4,102,571 + -0.2 4,102,571 + -0.3 4,102,571 + -1.2 4,102,571 + -1.2 4,102,571 + -0.6 4,102,571 + +0.3 4,102,572 - -0.5 4,102,572 - -0.4 4,102,572 - +0.1 4,102,572 - +0.5 4,102,572 - -0.7 4,102,572 - -0.1 4,102,572 - -0.1 4,102,572 - +0.0 4,102,572 - +0.1 4,102,577 + -1.5 4,102,578 - +0.1 4,102,596 + -0.5 4,102,597 - +0.7 4,102,597 - +1.0 4,102,638 + -0.8 4,102,639 - +0.3 4,102,683 - Echvi_3464 0.12 -0.1 4,102,713 - Echvi_3464 0.17 +0.1 4,102,782 - Echvi_3464 0.28 +0.5 4,102,811 + Echvi_3464 0.33 -0.1 4,102,811 + Echvi_3464 0.33 +1.1 4,102,811 + Echvi_3464 0.33 -1.7 4,102,811 + Echvi_3464 0.33 -0.7 4,102,811 + Echvi_3464 0.33 -0.6 4,102,811 + Echvi_3464 0.33 -0.3 4,102,811 + Echvi_3464 0.33 -0.3 4,102,812 - Echvi_3464 0.33 -1.4 4,102,812 - Echvi_3464 0.33 -0.8 4,102,812 - Echvi_3464 0.33 -0.2 4,102,834 + Echvi_3464 0.37 +0.5 4,102,834 + Echvi_3464 0.37 +0.6 4,102,834 + Echvi_3464 0.37 +1.1 4,102,835 - Echvi_3464 0.37 -0.0 4,102,835 - Echvi_3464 0.37 -1.4 4,102,835 - Echvi_3464 0.37 -1.6 4,102,835 - Echvi_3464 0.37 -0.6 4,102,835 - Echvi_3464 0.37 -0.4 4,102,837 - Echvi_3464 0.37 -1.8 4,102,838 + Echvi_3464 0.37 -1.7 4,102,838 + Echvi_3464 0.37 -1.0 4,102,838 + Echvi_3464 0.37 -0.9 4,102,839 - Echvi_3464 0.37 +1.4 4,102,846 - Echvi_3464 0.39 +1.2 4,102,865 - Echvi_3464 0.42 -0.2 4,102,865 - Echvi_3464 0.42 +1.4 4,102,869 - Echvi_3464 0.42 -0.7 4,102,872 - Echvi_3464 0.43 -0.2 4,102,872 - Echvi_3464 0.43 -0.0 4,102,872 - Echvi_3464 0.43 -0.6 4,102,875 + Echvi_3464 0.43 -0.4 4,102,875 + Echvi_3464 0.43 -0.8 4,102,876 - Echvi_3464 0.44 -0.8 4,102,876 - Echvi_3464 0.44 -0.6 4,102,876 - Echvi_3464 0.44 -0.2 4,102,901 - Echvi_3464 0.48 +1.1 4,102,907 + Echvi_3464 0.49 +0.4 4,102,907 + Echvi_3464 0.49 +1.2 4,102,908 - Echvi_3464 0.49 +0.5 4,102,908 - Echvi_3464 0.49 +1.6 4,102,911 + Echvi_3464 0.49 -0.8 4,102,911 + Echvi_3464 0.49 -1.1 4,102,911 + Echvi_3464 0.49 -0.4 4,102,913 + Echvi_3464 0.50 +0.2 4,102,978 + Echvi_3464 0.60 -0.4 4,102,978 + Echvi_3464 0.60 +0.3 4,102,979 - Echvi_3464 0.61 +0.5 4,102,988 + Echvi_3464 0.62 -1.0 4,102,989 - Echvi_3464 0.62 +0.5 4,103,010 + Echvi_3464 0.66 -0.3 4,103,011 - Echvi_3464 0.66 -0.3 4,103,011 - Echvi_3464 0.66 -0.6 4,103,011 - Echvi_3464 0.66 -0.2 4,103,027 + Echvi_3464 0.68 -1.5 4,103,028 - Echvi_3464 0.69 -0.3 4,103,048 + Echvi_3464 0.72 -0.3 4,103,048 + Echvi_3464 0.72 -0.2 4,103,048 + Echvi_3464 0.72 +0.4 4,103,067 + Echvi_3464 0.75 -1.3 4,103,085 + Echvi_3464 0.78 -1.4 4,103,086 - Echvi_3464 0.78 +1.7 4,103,087 + Echvi_3464 0.78 -2.2 4,103,087 + Echvi_3464 0.78 -1.1 4,103,088 - Echvi_3464 0.79 +0.2 4,103,123 + Echvi_3464 0.84 +0.3 4,103,124 - Echvi_3464 0.84 -0.7 4,103,180 - -0.7 4,103,194 - -0.2 4,103,221 + +0.3 4,103,388 + Echvi_3465 0.25 -1.2 4,103,388 + Echvi_3465 0.25 +0.8 4,103,388 + Echvi_3465 0.25 -0.5 4,103,425 + Echvi_3465 0.30 -0.1 4,103,425 + Echvi_3465 0.30 +0.8 4,103,427 + Echvi_3465 0.31 -0.0 4,103,427 + Echvi_3465 0.31 +0.1 4,103,427 + Echvi_3465 0.31 +0.7 4,103,427 + Echvi_3465 0.31 -1.5 4,103,428 - Echvi_3465 0.31 +1.5 4,103,428 - Echvi_3465 0.31 -0.5 4,103,428 - Echvi_3465 0.31 -2.2 4,103,458 + Echvi_3465 0.35 -1.4 4,103,459 - Echvi_3465 0.35 +1.6 4,103,462 - Echvi_3465 0.36 -0.9 4,103,467 + Echvi_3465 0.36 +0.8 4,103,468 - Echvi_3465 0.37 -1.0 4,103,556 - Echvi_3465 0.50 -0.5 4,103,556 - Echvi_3465 0.50 -0.0 4,103,556 - Echvi_3465 0.50 +0.9 4,103,575 - Echvi_3465 0.52 -0.4 4,103,580 + Echvi_3465 0.53 +1.3 4,103,581 - Echvi_3465 0.53 -0.4 4,103,581 - Echvi_3465 0.53 -0.7
Or see this region's nucleotide sequence