Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4534 and EX28DRAFT_4535 overlap by 14 nucleotides EX28DRAFT_4535 and EX28DRAFT_4536 overlap by 1 nucleotides EX28DRAFT_4536 and EX28DRAFT_4537 are separated by 244 nucleotides EX28DRAFT_4537 and EX28DRAFT_4538 are separated by 95 nucleotides
EX28DRAFT_4534: EX28DRAFT_4534 - Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2, at 17,341 to 18,096
_4534
EX28DRAFT_4535: EX28DRAFT_4535 - thiamine-phosphate diphosphorylase, at 18,083 to 18,724
_4535
EX28DRAFT_4536: EX28DRAFT_4536 - phosphomethylpyrimidine synthase, at 18,724 to 20,619
_4536
EX28DRAFT_4537: EX28DRAFT_4537 - Regulator of sigma D, at 20,864 to 21,361
_4537
EX28DRAFT_4538: EX28DRAFT_4538 - NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding, at 21,457 to 22,230
_4538
Position (kb) 18
19
20
21 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 18.244 kb on + strand, within EX28DRAFT_4535 at 18.265 kb on + strand, within EX28DRAFT_4535 at 18.351 kb on + strand, within EX28DRAFT_4535 at 18.351 kb on + strand, within EX28DRAFT_4535 at 18.352 kb on - strand, within EX28DRAFT_4535 at 18.352 kb on - strand, within EX28DRAFT_4535 at 18.352 kb on - strand, within EX28DRAFT_4535 at 18.524 kb on - strand, within EX28DRAFT_4535 at 18.687 kb on - strand at 18.720 kb on + strand at 18.720 kb on + strand at 18.720 kb on + strand at 18.720 kb on + strand at 18.720 kb on + strand at 18.721 kb on - strand at 18.721 kb on - strand at 18.721 kb on - strand at 18.721 kb on - strand at 18.725 kb on + strand at 18.726 kb on - strand at 18.746 kb on + strand at 18.873 kb on + strand at 18.874 kb on - strand at 19.070 kb on + strand, within EX28DRAFT_4536 at 19.242 kb on - strand, within EX28DRAFT_4536 at 19.242 kb on - strand, within EX28DRAFT_4536 at 19.343 kb on + strand, within EX28DRAFT_4536 at 19.343 kb on + strand, within EX28DRAFT_4536 at 19.344 kb on - strand, within EX28DRAFT_4536 at 19.463 kb on + strand, within EX28DRAFT_4536 at 19.464 kb on - strand, within EX28DRAFT_4536 at 19.794 kb on + strand, within EX28DRAFT_4536 at 19.795 kb on - strand, within EX28DRAFT_4536 at 19.795 kb on - strand, within EX28DRAFT_4536 at 19.795 kb on - strand, within EX28DRAFT_4536 at 19.797 kb on - strand, within EX28DRAFT_4536 at 19.897 kb on - strand, within EX28DRAFT_4536 at 20.012 kb on - strand, within EX28DRAFT_4536 at 20.073 kb on - strand, within EX28DRAFT_4536 at 20.518 kb on - strand at 20.518 kb on - strand at 20.519 kb on + strand at 20.614 kb on - strand at 20.619 kb on + strand at 20.619 kb on + strand at 20.619 kb on + strand at 20.619 kb on + strand at 20.619 kb on + strand at 20.619 kb on + strand at 20.619 kb on + strand at 20.620 kb on - strand at 20.620 kb on - strand at 20.620 kb on - strand at 20.620 kb on - strand at 20.620 kb on - strand at 20.693 kb on - strand at 20.838 kb on + strand at 20.838 kb on + strand at 20.936 kb on - strand, within EX28DRAFT_4537 at 20.936 kb on - strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.004 kb on - strand, within EX28DRAFT_4537 at 21.004 kb on - strand, within EX28DRAFT_4537 at 21.004 kb on - strand, within EX28DRAFT_4537 at 21.004 kb on - strand, within EX28DRAFT_4537 at 21.004 kb on - strand, within EX28DRAFT_4537 at 21.008 kb on - strand, within EX28DRAFT_4537 at 21.042 kb on + strand, within EX28DRAFT_4537 at 21.045 kb on + strand, within EX28DRAFT_4537 at 21.045 kb on + strand, within EX28DRAFT_4537 at 21.045 kb on + strand, within EX28DRAFT_4537 at 21.102 kb on - strand, within EX28DRAFT_4537 at 21.105 kb on + strand, within EX28DRAFT_4537 at 21.145 kb on - strand, within EX28DRAFT_4537 at 21.149 kb on - strand, within EX28DRAFT_4537 at 21.171 kb on + strand, within EX28DRAFT_4537 at 21.172 kb on - strand, within EX28DRAFT_4537 at 21.244 kb on + strand, within EX28DRAFT_4537 at 21.244 kb on + strand, within EX28DRAFT_4537 at 21.245 kb on - strand, within EX28DRAFT_4537 at 21.261 kb on + strand, within EX28DRAFT_4537 at 21.275 kb on + strand, within EX28DRAFT_4537 at 21.276 kb on - strand, within EX28DRAFT_4537 at 21.276 kb on - strand, within EX28DRAFT_4537 at 21.287 kb on + strand, within EX28DRAFT_4537 at 21.288 kb on - strand, within EX28DRAFT_4537 at 21.288 kb on - strand, within EX28DRAFT_4537 at 21.288 kb on - strand, within EX28DRAFT_4537 at 21.293 kb on + strand, within EX28DRAFT_4537 at 21.293 kb on + strand, within EX28DRAFT_4537 at 21.294 kb on - strand, within EX28DRAFT_4537 at 21.357 kb on - strand at 21.357 kb on - strand at 21.380 kb on + strand at 21.381 kb on - strand at 21.407 kb on + strand at 21.444 kb on + strand at 21.452 kb on + strand at 21.453 kb on - strand at 21.453 kb on - strand at 21.453 kb on - strand at 21.453 kb on - strand at 21.456 kb on + strand at 21.456 kb on + strand at 21.456 kb on + strand at 21.456 kb on + strand at 21.457 kb on - strand at 21.465 kb on + strand at 21.466 kb on - strand at 21.466 kb on - strand at 21.469 kb on - strand at 21.519 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 18,244 + EX28DRAFT_4535 0.25 -0.4 18,265 + EX28DRAFT_4535 0.28 +0.9 18,351 + EX28DRAFT_4535 0.42 -1.0 18,351 + EX28DRAFT_4535 0.42 -0.0 18,352 - EX28DRAFT_4535 0.42 -0.5 18,352 - EX28DRAFT_4535 0.42 -0.9 18,352 - EX28DRAFT_4535 0.42 +0.8 18,524 - EX28DRAFT_4535 0.69 +0.7 18,687 - -0.7 18,720 + +0.1 18,720 + -1.4 18,720 + -0.4 18,720 + -0.3 18,720 + +0.0 18,721 - +0.1 18,721 - -0.8 18,721 - +0.0 18,721 - +0.0 18,725 + +1.1 18,726 - -0.2 18,746 + +0.1 18,873 + +0.7 18,874 - +0.1 19,070 + EX28DRAFT_4536 0.18 +0.0 19,242 - EX28DRAFT_4536 0.27 -0.3 19,242 - EX28DRAFT_4536 0.27 -0.2 19,343 + EX28DRAFT_4536 0.33 -0.7 19,343 + EX28DRAFT_4536 0.33 -0.8 19,344 - EX28DRAFT_4536 0.33 -1.0 19,463 + EX28DRAFT_4536 0.39 -0.5 19,464 - EX28DRAFT_4536 0.39 -0.2 19,794 + EX28DRAFT_4536 0.56 -0.1 19,795 - EX28DRAFT_4536 0.56 +0.1 19,795 - EX28DRAFT_4536 0.56 -0.0 19,795 - EX28DRAFT_4536 0.56 +0.1 19,797 - EX28DRAFT_4536 0.57 -0.5 19,897 - EX28DRAFT_4536 0.62 +0.2 20,012 - EX28DRAFT_4536 0.68 -0.8 20,073 - EX28DRAFT_4536 0.71 +1.3 20,518 - +0.0 20,518 - -1.6 20,519 + -1.0 20,614 - +0.2 20,619 + +0.2 20,619 + +1.0 20,619 + +0.3 20,619 + -0.7 20,619 + -0.1 20,619 + +1.1 20,619 + +1.2 20,620 - -0.4 20,620 - -1.2 20,620 - -0.5 20,620 - +0.5 20,620 - -0.3 20,693 - -1.2 20,838 + +0.3 20,838 + -0.4 20,936 - EX28DRAFT_4537 0.14 -0.2 20,936 - EX28DRAFT_4537 0.14 +0.6 21,003 + EX28DRAFT_4537 0.28 -0.3 21,003 + EX28DRAFT_4537 0.28 -0.2 21,003 + EX28DRAFT_4537 0.28 -0.4 21,003 + EX28DRAFT_4537 0.28 +0.7 21,003 + EX28DRAFT_4537 0.28 +0.1 21,003 + EX28DRAFT_4537 0.28 +1.4 21,003 + EX28DRAFT_4537 0.28 +0.4 21,003 + EX28DRAFT_4537 0.28 +0.1 21,004 - EX28DRAFT_4537 0.28 +1.9 21,004 - EX28DRAFT_4537 0.28 -2.1 21,004 - EX28DRAFT_4537 0.28 -0.2 21,004 - EX28DRAFT_4537 0.28 -3.8 21,004 - EX28DRAFT_4537 0.28 +1.3 21,008 - EX28DRAFT_4537 0.29 +0.0 21,042 + EX28DRAFT_4537 0.36 +0.4 21,045 + EX28DRAFT_4537 0.36 -0.8 21,045 + EX28DRAFT_4537 0.36 +0.4 21,045 + EX28DRAFT_4537 0.36 +0.2 21,102 - EX28DRAFT_4537 0.48 +0.3 21,105 + EX28DRAFT_4537 0.48 +0.5 21,145 - EX28DRAFT_4537 0.56 -0.0 21,149 - EX28DRAFT_4537 0.57 -0.3 21,171 + EX28DRAFT_4537 0.62 -0.7 21,172 - EX28DRAFT_4537 0.62 -0.3 21,244 + EX28DRAFT_4537 0.76 -0.2 21,244 + EX28DRAFT_4537 0.76 -0.4 21,245 - EX28DRAFT_4537 0.77 -0.6 21,261 + EX28DRAFT_4537 0.80 +0.0 21,275 + EX28DRAFT_4537 0.83 -0.1 21,276 - EX28DRAFT_4537 0.83 +1.1 21,276 - EX28DRAFT_4537 0.83 -0.1 21,287 + EX28DRAFT_4537 0.85 +0.2 21,288 - EX28DRAFT_4537 0.85 -0.1 21,288 - EX28DRAFT_4537 0.85 -0.1 21,288 - EX28DRAFT_4537 0.85 -0.3 21,293 + EX28DRAFT_4537 0.86 -0.9 21,293 + EX28DRAFT_4537 0.86 -0.2 21,294 - EX28DRAFT_4537 0.86 +0.2 21,357 - +0.5 21,357 - -0.5 21,380 + -0.1 21,381 - -0.4 21,407 + -0.1 21,444 + +0.4 21,452 + +0.1 21,453 - +0.6 21,453 - +0.2 21,453 - +0.1 21,453 - +1.0 21,456 + -0.0 21,456 + -0.3 21,456 + +1.1 21,456 + -0.0 21,457 - +0.2 21,465 + +0.1 21,466 - -0.4 21,466 - -0.3 21,469 - +0.1 21,519 - +0.3
Or see this region's nucleotide sequence