Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4141 and EX28DRAFT_4142 are separated by 23 nucleotides EX28DRAFT_4142 and EX28DRAFT_4143 overlap by 4 nucleotides EX28DRAFT_4143 and EX28DRAFT_4144 are separated by 67 nucleotides
EX28DRAFT_4141: EX28DRAFT_4141 - Disulfide bond chaperones of the HSP33 family, at 121,941 to 122,819
_4141
EX28DRAFT_4142: EX28DRAFT_4142 - Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog), at 122,843 to 123,244
_4142
EX28DRAFT_4143: EX28DRAFT_4143 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 123,241 to 123,924
_4143
EX28DRAFT_4144: EX28DRAFT_4144 - Intracellular growth attenuator protein IgaA, at 123,992 to 126,127
_4144
Position (kb)
122
123
124 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 122.011 kb on + strand at 122.011 kb on + strand at 122.011 kb on + strand at 122.012 kb on - strand at 122.012 kb on - strand at 122.393 kb on - strand, within EX28DRAFT_4141 at 122.791 kb on + strand at 122.800 kb on - strand at 122.991 kb on + strand, within EX28DRAFT_4142 at 123.052 kb on + strand, within EX28DRAFT_4142 at 123.052 kb on + strand, within EX28DRAFT_4142 at 123.052 kb on + strand, within EX28DRAFT_4142 at 123.052 kb on + strand, within EX28DRAFT_4142 at 123.132 kb on + strand, within EX28DRAFT_4142 at 123.133 kb on - strand, within EX28DRAFT_4142 at 123.133 kb on - strand, within EX28DRAFT_4142 at 123.311 kb on + strand, within EX28DRAFT_4143 at 123.312 kb on - strand, within EX28DRAFT_4143 at 123.312 kb on - strand, within EX28DRAFT_4143 at 123.420 kb on + strand, within EX28DRAFT_4143 at 123.420 kb on + strand, within EX28DRAFT_4143 at 123.421 kb on - strand, within EX28DRAFT_4143 at 123.561 kb on + strand, within EX28DRAFT_4143 at 123.684 kb on + strand, within EX28DRAFT_4143 at 123.711 kb on - strand, within EX28DRAFT_4143 at 123.723 kb on - strand, within EX28DRAFT_4143 at 123.736 kb on - strand, within EX28DRAFT_4143 at 123.750 kb on + strand, within EX28DRAFT_4143 at 123.753 kb on - strand, within EX28DRAFT_4143 at 123.753 kb on - strand, within EX28DRAFT_4143 at 123.809 kb on + strand, within EX28DRAFT_4143 at 123.810 kb on - strand, within EX28DRAFT_4143 at 123.839 kb on + strand, within EX28DRAFT_4143 at 123.840 kb on - strand, within EX28DRAFT_4143 at 123.840 kb on - strand, within EX28DRAFT_4143 at 123.843 kb on + strand, within EX28DRAFT_4143 at 123.844 kb on - strand, within EX28DRAFT_4143 at 123.895 kb on + strand at 123.895 kb on + strand at 123.895 kb on + strand at 123.896 kb on - strand at 123.965 kb on - strand at 124.025 kb on - strand at 124.025 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 122,011 + -0.4 122,011 + -0.5 122,011 + -0.9 122,012 - -0.4 122,012 - -0.7 122,393 - EX28DRAFT_4141 0.51 +2.0 122,791 + -0.7 122,800 - -0.3 122,991 + EX28DRAFT_4142 0.37 -0.7 123,052 + EX28DRAFT_4142 0.52 -0.2 123,052 + EX28DRAFT_4142 0.52 -0.2 123,052 + EX28DRAFT_4142 0.52 -0.3 123,052 + EX28DRAFT_4142 0.52 -0.3 123,132 + EX28DRAFT_4142 0.72 -0.2 123,133 - EX28DRAFT_4142 0.72 -0.4 123,133 - EX28DRAFT_4142 0.72 +0.2 123,311 + EX28DRAFT_4143 0.10 +0.1 123,312 - EX28DRAFT_4143 0.10 -0.3 123,312 - EX28DRAFT_4143 0.10 +0.0 123,420 + EX28DRAFT_4143 0.26 -0.3 123,420 + EX28DRAFT_4143 0.26 +0.2 123,421 - EX28DRAFT_4143 0.26 -0.5 123,561 + EX28DRAFT_4143 0.47 -1.3 123,684 + EX28DRAFT_4143 0.65 -2.9 123,711 - EX28DRAFT_4143 0.69 +0.1 123,723 - EX28DRAFT_4143 0.70 +0.1 123,736 - EX28DRAFT_4143 0.72 -0.6 123,750 + EX28DRAFT_4143 0.74 -0.2 123,753 - EX28DRAFT_4143 0.75 +0.8 123,753 - EX28DRAFT_4143 0.75 +0.1 123,809 + EX28DRAFT_4143 0.83 -0.2 123,810 - EX28DRAFT_4143 0.83 -0.2 123,839 + EX28DRAFT_4143 0.87 +0.5 123,840 - EX28DRAFT_4143 0.88 +0.4 123,840 - EX28DRAFT_4143 0.88 +2.0 123,843 + EX28DRAFT_4143 0.88 -0.4 123,844 - EX28DRAFT_4143 0.88 +0.5 123,895 + -0.0 123,895 + -0.2 123,895 + -0.7 123,896 - -0.7 123,965 - +0.6 124,025 - -0.3 124,025 - -0.2
Or see this region's nucleotide sequence