Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4126 and EX28DRAFT_4127 are separated by 67 nucleotides EX28DRAFT_4127 and EX28DRAFT_4128 are separated by 385 nucleotides
EX28DRAFT_4126: EX28DRAFT_4126 - 4-alpha-glucanotransferase, at 105,063 to 107,141
_4126
EX28DRAFT_4127: EX28DRAFT_4127 - gluconate transporter, at 107,209 to 108,525
_4127
EX28DRAFT_4128: EX28DRAFT_4128 - IscR-regulated protein YhgI, at 108,911 to 109,486
_4128
Position (kb)
107
108
109 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 106.467 kb on + strand, within EX28DRAFT_4126 at 106.518 kb on - strand, within EX28DRAFT_4126 at 106.518 kb on - strand, within EX28DRAFT_4126 at 106.602 kb on + strand, within EX28DRAFT_4126 at 106.602 kb on + strand, within EX28DRAFT_4126 at 106.608 kb on + strand, within EX28DRAFT_4126 at 106.609 kb on - strand, within EX28DRAFT_4126 at 106.610 kb on + strand, within EX28DRAFT_4126 at 106.611 kb on - strand, within EX28DRAFT_4126 at 106.611 kb on - strand, within EX28DRAFT_4126 at 106.722 kb on + strand, within EX28DRAFT_4126 at 106.797 kb on + strand, within EX28DRAFT_4126 at 106.877 kb on + strand, within EX28DRAFT_4126 at 106.930 kb on - strand, within EX28DRAFT_4126 at 107.019 kb on + strand at 107.019 kb on + strand at 107.025 kb on + strand at 107.026 kb on - strand at 107.026 kb on - strand at 107.099 kb on + strand at 107.107 kb on + strand at 107.170 kb on + strand at 107.206 kb on - strand at 107.221 kb on - strand at 107.316 kb on - strand at 107.404 kb on + strand, within EX28DRAFT_4127 at 107.499 kb on + strand, within EX28DRAFT_4127 at 107.499 kb on + strand, within EX28DRAFT_4127 at 107.500 kb on - strand, within EX28DRAFT_4127 at 107.555 kb on + strand, within EX28DRAFT_4127 at 107.556 kb on - strand, within EX28DRAFT_4127 at 107.556 kb on - strand, within EX28DRAFT_4127 at 107.556 kb on - strand, within EX28DRAFT_4127 at 107.556 kb on - strand, within EX28DRAFT_4127 at 107.655 kb on + strand, within EX28DRAFT_4127 at 107.901 kb on - strand, within EX28DRAFT_4127 at 108.009 kb on + strand, within EX28DRAFT_4127 at 108.009 kb on + strand, within EX28DRAFT_4127 at 108.113 kb on + strand, within EX28DRAFT_4127 at 108.113 kb on + strand, within EX28DRAFT_4127 at 108.114 kb on - strand, within EX28DRAFT_4127 at 108.277 kb on - strand, within EX28DRAFT_4127 at 108.490 kb on + strand at 108.490 kb on + strand at 108.490 kb on + strand at 108.491 kb on - strand at 108.491 kb on - strand at 108.491 kb on - strand at 108.531 kb on - strand at 108.759 kb on + strand at 108.761 kb on + strand at 108.762 kb on - strand at 108.762 kb on - strand at 108.817 kb on + strand at 108.912 kb on + strand at 108.913 kb on - strand at 108.916 kb on - strand at 108.919 kb on - strand at 108.919 kb on - strand at 109.360 kb on - strand, within EX28DRAFT_4128 at 109.478 kb on - strand at 109.487 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 106,467 + EX28DRAFT_4126 0.68 +0.1 106,518 - EX28DRAFT_4126 0.70 -0.4 106,518 - EX28DRAFT_4126 0.70 -0.1 106,602 + EX28DRAFT_4126 0.74 -0.3 106,602 + EX28DRAFT_4126 0.74 -1.7 106,608 + EX28DRAFT_4126 0.74 -0.0 106,609 - EX28DRAFT_4126 0.74 +0.3 106,610 + EX28DRAFT_4126 0.74 +0.5 106,611 - EX28DRAFT_4126 0.74 +1.2 106,611 - EX28DRAFT_4126 0.74 +0.2 106,722 + EX28DRAFT_4126 0.80 +0.0 106,797 + EX28DRAFT_4126 0.83 +0.2 106,877 + EX28DRAFT_4126 0.87 +0.0 106,930 - EX28DRAFT_4126 0.90 +0.8 107,019 + -0.3 107,019 + +0.2 107,025 + -0.8 107,026 - -1.4 107,026 - +0.1 107,099 + +0.4 107,107 + -0.3 107,170 + +0.5 107,206 - +0.1 107,221 - +0.1 107,316 - -0.9 107,404 + EX28DRAFT_4127 0.15 -1.4 107,499 + EX28DRAFT_4127 0.22 +0.2 107,499 + EX28DRAFT_4127 0.22 +0.5 107,500 - EX28DRAFT_4127 0.22 +0.2 107,555 + EX28DRAFT_4127 0.26 -0.1 107,556 - EX28DRAFT_4127 0.26 +0.6 107,556 - EX28DRAFT_4127 0.26 -0.1 107,556 - EX28DRAFT_4127 0.26 +0.1 107,556 - EX28DRAFT_4127 0.26 +0.8 107,655 + EX28DRAFT_4127 0.34 +0.1 107,901 - EX28DRAFT_4127 0.53 +0.1 108,009 + EX28DRAFT_4127 0.61 -0.1 108,009 + EX28DRAFT_4127 0.61 -0.2 108,113 + EX28DRAFT_4127 0.69 +0.2 108,113 + EX28DRAFT_4127 0.69 +0.3 108,114 - EX28DRAFT_4127 0.69 +0.5 108,277 - EX28DRAFT_4127 0.81 -0.3 108,490 + -0.2 108,490 + -1.0 108,490 + +0.1 108,491 - +0.7 108,491 - -1.4 108,491 - -0.1 108,531 - -0.5 108,759 + -0.3 108,761 + -0.1 108,762 - -2.3 108,762 - -0.2 108,817 + -1.0 108,912 + +0.2 108,913 - -0.3 108,916 - -1.1 108,919 - +0.1 108,919 - -0.6 109,360 - EX28DRAFT_4128 0.78 -0.5 109,478 - -4.5 109,487 - -1.5
Or see this region's nucleotide sequence