Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4046 and EX28DRAFT_4047 overlap by 19 nucleotides EX28DRAFT_4047 and EX28DRAFT_4048 are separated by 119 nucleotides
EX28DRAFT_4046: EX28DRAFT_4046 - Endoglucanase Y, at 13,062 to 14,168
_4046
EX28DRAFT_4047: EX28DRAFT_4047 - Tetratricopeptide repeat/Cellulose synthase operon protein C C-terminus (BCSC_C)/TPR repeat, at 14,150 to 17,632
_4047
EX28DRAFT_4048: EX28DRAFT_4048 - FOG: EAL domain, at 17,752 to 19,758
_4048
Position (kb) 14
15
16
17
18 Strain fitness (log2 ratio) -1
0
1
2 at 13.155 kb on - strand at 13.165 kb on - strand at 13.214 kb on + strand, within EX28DRAFT_4046 at 13.237 kb on - strand, within EX28DRAFT_4046 at 13.471 kb on - strand, within EX28DRAFT_4046 at 13.473 kb on - strand, within EX28DRAFT_4046 at 13.473 kb on - strand, within EX28DRAFT_4046 at 13.473 kb on - strand, within EX28DRAFT_4046 at 13.605 kb on + strand, within EX28DRAFT_4046 at 13.605 kb on + strand, within EX28DRAFT_4046 at 13.605 kb on + strand, within EX28DRAFT_4046 at 13.629 kb on + strand, within EX28DRAFT_4046 at 13.629 kb on + strand, within EX28DRAFT_4046 at 13.757 kb on - strand, within EX28DRAFT_4046 at 13.767 kb on - strand, within EX28DRAFT_4046 at 13.804 kb on - strand, within EX28DRAFT_4046 at 13.985 kb on - strand, within EX28DRAFT_4046 at 14.045 kb on + strand, within EX28DRAFT_4046 at 14.045 kb on + strand, within EX28DRAFT_4046 at 14.045 kb on + strand, within EX28DRAFT_4046 at 14.046 kb on - strand, within EX28DRAFT_4046 at 14.046 kb on - strand, within EX28DRAFT_4046 at 14.046 kb on - strand, within EX28DRAFT_4046 at 14.053 kb on - strand, within EX28DRAFT_4046 at 14.053 kb on - strand, within EX28DRAFT_4046 at 14.055 kb on + strand, within EX28DRAFT_4046 at 14.055 kb on + strand, within EX28DRAFT_4046 at 14.055 kb on + strand, within EX28DRAFT_4046 at 14.128 kb on + strand at 14.173 kb on - strand at 14.173 kb on - strand at 14.555 kb on + strand, within EX28DRAFT_4047 at 14.555 kb on + strand, within EX28DRAFT_4047 at 14.556 kb on - strand, within EX28DRAFT_4047 at 14.692 kb on + strand, within EX28DRAFT_4047 at 14.693 kb on - strand, within EX28DRAFT_4047 at 14.776 kb on + strand, within EX28DRAFT_4047 at 14.777 kb on - strand, within EX28DRAFT_4047 at 14.777 kb on - strand, within EX28DRAFT_4047 at 14.817 kb on - strand, within EX28DRAFT_4047 at 14.873 kb on + strand, within EX28DRAFT_4047 at 14.900 kb on - strand, within EX28DRAFT_4047 at 15.010 kb on + strand, within EX28DRAFT_4047 at 15.011 kb on - strand, within EX28DRAFT_4047 at 15.269 kb on + strand, within EX28DRAFT_4047 at 15.273 kb on - strand, within EX28DRAFT_4047 at 15.308 kb on + strand, within EX28DRAFT_4047 at 15.309 kb on - strand, within EX28DRAFT_4047 at 15.347 kb on - strand, within EX28DRAFT_4047 at 15.392 kb on - strand, within EX28DRAFT_4047 at 15.433 kb on + strand, within EX28DRAFT_4047 at 15.515 kb on - strand, within EX28DRAFT_4047 at 15.750 kb on - strand, within EX28DRAFT_4047 at 15.750 kb on - strand, within EX28DRAFT_4047 at 15.764 kb on + strand, within EX28DRAFT_4047 at 16.028 kb on + strand, within EX28DRAFT_4047 at 16.028 kb on + strand, within EX28DRAFT_4047 at 16.029 kb on - strand, within EX28DRAFT_4047 at 16.029 kb on - strand, within EX28DRAFT_4047 at 16.038 kb on + strand, within EX28DRAFT_4047 at 16.092 kb on - strand, within EX28DRAFT_4047 at 16.092 kb on - strand, within EX28DRAFT_4047 at 16.093 kb on + strand, within EX28DRAFT_4047 at 16.361 kb on + strand, within EX28DRAFT_4047 at 16.362 kb on - strand, within EX28DRAFT_4047 at 16.689 kb on - strand, within EX28DRAFT_4047 at 16.689 kb on - strand, within EX28DRAFT_4047 at 16.689 kb on - strand, within EX28DRAFT_4047 at 16.712 kb on + strand, within EX28DRAFT_4047 at 16.784 kb on - strand, within EX28DRAFT_4047 at 16.856 kb on + strand, within EX28DRAFT_4047 at 16.856 kb on + strand, within EX28DRAFT_4047 at 16.885 kb on + strand, within EX28DRAFT_4047 at 16.886 kb on - strand, within EX28DRAFT_4047 at 16.948 kb on + strand, within EX28DRAFT_4047 at 16.949 kb on - strand, within EX28DRAFT_4047 at 16.978 kb on - strand, within EX28DRAFT_4047 at 16.999 kb on - strand, within EX28DRAFT_4047 at 17.009 kb on + strand, within EX28DRAFT_4047 at 17.009 kb on + strand, within EX28DRAFT_4047 at 17.010 kb on - strand, within EX28DRAFT_4047 at 17.084 kb on - strand, within EX28DRAFT_4047 at 17.111 kb on + strand, within EX28DRAFT_4047 at 17.114 kb on + strand, within EX28DRAFT_4047 at 17.114 kb on + strand, within EX28DRAFT_4047 at 17.115 kb on - strand, within EX28DRAFT_4047 at 17.117 kb on + strand, within EX28DRAFT_4047 at 17.167 kb on + strand, within EX28DRAFT_4047 at 17.168 kb on - strand, within EX28DRAFT_4047 at 17.203 kb on + strand, within EX28DRAFT_4047 at 17.204 kb on - strand, within EX28DRAFT_4047 at 17.204 kb on - strand, within EX28DRAFT_4047 at 17.226 kb on - strand, within EX28DRAFT_4047 at 17.240 kb on + strand, within EX28DRAFT_4047 at 17.240 kb on + strand, within EX28DRAFT_4047 at 17.240 kb on + strand, within EX28DRAFT_4047 at 17.240 kb on + strand, within EX28DRAFT_4047 at 17.240 kb on + strand, within EX28DRAFT_4047 at 17.241 kb on - strand, within EX28DRAFT_4047 at 17.241 kb on - strand, within EX28DRAFT_4047 at 17.329 kb on + strand at 17.330 kb on - strand at 17.394 kb on - strand at 17.445 kb on - strand at 17.494 kb on - strand at 17.494 kb on - strand at 17.494 kb on - strand at 17.529 kb on - strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.553 kb on - strand at 17.656 kb on + strand at 17.656 kb on + strand at 17.657 kb on - strand at 17.689 kb on - strand at 17.708 kb on - strand at 17.807 kb on + strand at 17.819 kb on + strand at 17.819 kb on + strand at 17.888 kb on + strand at 17.889 kb on - strand at 17.895 kb on + strand at 17.895 kb on + strand at 18.163 kb on + strand, within EX28DRAFT_4048 at 18.173 kb on + strand, within EX28DRAFT_4048 at 18.198 kb on + strand, within EX28DRAFT_4048 at 18.243 kb on - strand, within EX28DRAFT_4048 at 18.247 kb on - strand, within EX28DRAFT_4048 at 18.256 kb on - strand, within EX28DRAFT_4048 at 18.333 kb on + strand, within EX28DRAFT_4048 at 18.374 kb on + strand, within EX28DRAFT_4048 at 18.401 kb on + strand, within EX28DRAFT_4048 at 18.401 kb on + strand, within EX28DRAFT_4048 at 18.401 kb on + strand, within EX28DRAFT_4048 at 18.402 kb on - strand, within EX28DRAFT_4048 at 18.405 kb on + strand, within EX28DRAFT_4048 at 18.406 kb on - strand, within EX28DRAFT_4048 at 18.406 kb on - strand, within EX28DRAFT_4048 at 18.421 kb on + strand, within EX28DRAFT_4048 at 18.464 kb on + strand, within EX28DRAFT_4048 at 18.464 kb on + strand, within EX28DRAFT_4048 at 18.507 kb on + strand, within EX28DRAFT_4048 at 18.508 kb on - strand, within EX28DRAFT_4048
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 13,155 - +0.7 13,165 - +0.6 13,214 + EX28DRAFT_4046 0.14 -0.3 13,237 - EX28DRAFT_4046 0.16 +0.2 13,471 - EX28DRAFT_4046 0.37 +0.7 13,473 - EX28DRAFT_4046 0.37 +0.9 13,473 - EX28DRAFT_4046 0.37 +0.3 13,473 - EX28DRAFT_4046 0.37 +0.9 13,605 + EX28DRAFT_4046 0.49 -0.3 13,605 + EX28DRAFT_4046 0.49 -0.0 13,605 + EX28DRAFT_4046 0.49 +0.0 13,629 + EX28DRAFT_4046 0.51 +0.1 13,629 + EX28DRAFT_4046 0.51 -0.1 13,757 - EX28DRAFT_4046 0.63 +0.4 13,767 - EX28DRAFT_4046 0.64 +0.1 13,804 - EX28DRAFT_4046 0.67 +0.8 13,985 - EX28DRAFT_4046 0.83 +0.4 14,045 + EX28DRAFT_4046 0.89 -0.3 14,045 + EX28DRAFT_4046 0.89 -0.4 14,045 + EX28DRAFT_4046 0.89 +0.5 14,046 - EX28DRAFT_4046 0.89 -0.1 14,046 - EX28DRAFT_4046 0.89 +0.5 14,046 - EX28DRAFT_4046 0.89 +0.8 14,053 - EX28DRAFT_4046 0.90 +0.7 14,053 - EX28DRAFT_4046 0.90 +0.0 14,055 + EX28DRAFT_4046 0.90 -0.1 14,055 + EX28DRAFT_4046 0.90 -0.1 14,055 + EX28DRAFT_4046 0.90 +1.1 14,128 + +0.2 14,173 - +1.8 14,173 - +1.3 14,555 + EX28DRAFT_4047 0.12 +1.5 14,555 + EX28DRAFT_4047 0.12 +1.8 14,556 - EX28DRAFT_4047 0.12 +1.4 14,692 + EX28DRAFT_4047 0.16 +0.8 14,693 - EX28DRAFT_4047 0.16 +1.2 14,776 + EX28DRAFT_4047 0.18 +0.8 14,777 - EX28DRAFT_4047 0.18 +1.2 14,777 - EX28DRAFT_4047 0.18 +0.9 14,817 - EX28DRAFT_4047 0.19 +1.4 14,873 + EX28DRAFT_4047 0.21 +0.8 14,900 - EX28DRAFT_4047 0.22 +0.4 15,010 + EX28DRAFT_4047 0.25 +0.8 15,011 - EX28DRAFT_4047 0.25 +1.9 15,269 + EX28DRAFT_4047 0.32 +1.4 15,273 - EX28DRAFT_4047 0.32 +1.2 15,308 + EX28DRAFT_4047 0.33 +0.3 15,309 - EX28DRAFT_4047 0.33 +1.1 15,347 - EX28DRAFT_4047 0.34 +0.5 15,392 - EX28DRAFT_4047 0.36 +1.1 15,433 + EX28DRAFT_4047 0.37 -0.1 15,515 - EX28DRAFT_4047 0.39 +1.2 15,750 - EX28DRAFT_4047 0.46 +0.6 15,750 - EX28DRAFT_4047 0.46 +1.5 15,764 + EX28DRAFT_4047 0.46 +0.9 16,028 + EX28DRAFT_4047 0.54 +1.4 16,028 + EX28DRAFT_4047 0.54 +0.6 16,029 - EX28DRAFT_4047 0.54 +0.9 16,029 - EX28DRAFT_4047 0.54 +1.3 16,038 + EX28DRAFT_4047 0.54 +2.3 16,092 - EX28DRAFT_4047 0.56 +1.0 16,092 - EX28DRAFT_4047 0.56 +1.2 16,093 + EX28DRAFT_4047 0.56 +1.4 16,361 + EX28DRAFT_4047 0.63 +0.8 16,362 - EX28DRAFT_4047 0.64 +0.5 16,689 - EX28DRAFT_4047 0.73 +1.1 16,689 - EX28DRAFT_4047 0.73 +0.9 16,689 - EX28DRAFT_4047 0.73 +0.8 16,712 + EX28DRAFT_4047 0.74 +0.1 16,784 - EX28DRAFT_4047 0.76 +1.9 16,856 + EX28DRAFT_4047 0.78 +1.1 16,856 + EX28DRAFT_4047 0.78 +1.2 16,885 + EX28DRAFT_4047 0.79 +0.8 16,886 - EX28DRAFT_4047 0.79 +0.7 16,948 + EX28DRAFT_4047 0.80 +0.7 16,949 - EX28DRAFT_4047 0.80 +0.3 16,978 - EX28DRAFT_4047 0.81 +1.2 16,999 - EX28DRAFT_4047 0.82 +0.9 17,009 + EX28DRAFT_4047 0.82 +1.3 17,009 + EX28DRAFT_4047 0.82 +0.7 17,010 - EX28DRAFT_4047 0.82 +1.7 17,084 - EX28DRAFT_4047 0.84 +1.1 17,111 + EX28DRAFT_4047 0.85 +2.0 17,114 + EX28DRAFT_4047 0.85 +1.1 17,114 + EX28DRAFT_4047 0.85 +1.0 17,115 - EX28DRAFT_4047 0.85 +1.6 17,117 + EX28DRAFT_4047 0.85 +1.8 17,167 + EX28DRAFT_4047 0.87 +0.5 17,168 - EX28DRAFT_4047 0.87 +1.5 17,203 + EX28DRAFT_4047 0.88 -0.5 17,204 - EX28DRAFT_4047 0.88 +2.0 17,204 - EX28DRAFT_4047 0.88 +1.2 17,226 - EX28DRAFT_4047 0.88 +2.0 17,240 + EX28DRAFT_4047 0.89 +0.9 17,240 + EX28DRAFT_4047 0.89 +1.0 17,240 + EX28DRAFT_4047 0.89 +1.8 17,240 + EX28DRAFT_4047 0.89 +0.6 17,240 + EX28DRAFT_4047 0.89 +0.8 17,241 - EX28DRAFT_4047 0.89 -0.2 17,241 - EX28DRAFT_4047 0.89 +1.5 17,329 + -0.2 17,330 - +1.0 17,394 - -0.1 17,445 - +0.5 17,494 - +0.9 17,494 - +0.9 17,494 - +1.1 17,529 - +0.5 17,552 + +0.2 17,552 + +1.0 17,552 + +1.0 17,552 + +0.8 17,552 + +1.2 17,552 + +1.1 17,552 + +0.7 17,552 + +1.4 17,553 - +1.1 17,656 + +0.3 17,656 + +0.9 17,657 - +0.1 17,689 - +0.2 17,708 - +0.5 17,807 + +0.0 17,819 + +0.2 17,819 + +0.6 17,888 + +0.7 17,889 - +0.1 17,895 + +0.9 17,895 + +0.6 18,163 + EX28DRAFT_4048 0.20 +0.7 18,173 + EX28DRAFT_4048 0.21 -0.1 18,198 + EX28DRAFT_4048 0.22 +0.3 18,243 - EX28DRAFT_4048 0.24 +1.1 18,247 - EX28DRAFT_4048 0.25 +1.1 18,256 - EX28DRAFT_4048 0.25 +0.6 18,333 + EX28DRAFT_4048 0.29 +0.4 18,374 + EX28DRAFT_4048 0.31 +0.1 18,401 + EX28DRAFT_4048 0.32 +0.3 18,401 + EX28DRAFT_4048 0.32 +0.9 18,401 + EX28DRAFT_4048 0.32 +1.0 18,402 - EX28DRAFT_4048 0.32 +0.8 18,405 + EX28DRAFT_4048 0.33 -0.3 18,406 - EX28DRAFT_4048 0.33 +0.6 18,406 - EX28DRAFT_4048 0.33 +0.3 18,421 + EX28DRAFT_4048 0.33 +0.3 18,464 + EX28DRAFT_4048 0.35 +0.1 18,464 + EX28DRAFT_4048 0.35 -0.4 18,507 + EX28DRAFT_4048 0.38 -0.5 18,508 - EX28DRAFT_4048 0.38 +0.2
Or see this region's nucleotide sequence