Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3951 and EX28DRAFT_3952 overlap by 4 nucleotides EX28DRAFT_3952 and EX28DRAFT_3953 are separated by 100 nucleotides EX28DRAFT_3953 and EX28DRAFT_3954 are separated by 3 nucleotides
EX28DRAFT_3951: EX28DRAFT_3951 - Signal transduction histidine kinase, glucose-6-phosphate specific, at 161,539 to 163,044
_3951
EX28DRAFT_3952: EX28DRAFT_3952 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 163,041 to 163,634
_3952
EX28DRAFT_3953: EX28DRAFT_3953 - acetolactate synthase, small subunit (EC 2.2.1.6), at 163,735 to 164,022
_3953
EX28DRAFT_3954: EX28DRAFT_3954 - acetolactate synthase, large subunit (EC 2.2.1.6), at 164,026 to 165,714
_3954
Position (kb) 163
164 Strain fitness (log2 ratio) -1
0
1 at 162.229 kb on + strand, within EX28DRAFT_3951 at 162.284 kb on - strand, within EX28DRAFT_3951 at 162.372 kb on - strand, within EX28DRAFT_3951 at 162.769 kb on - strand, within EX28DRAFT_3951 at 163.171 kb on - strand, within EX28DRAFT_3952 at 163.269 kb on + strand, within EX28DRAFT_3952 at 163.274 kb on - strand, within EX28DRAFT_3952 at 163.406 kb on + strand, within EX28DRAFT_3952 at 163.481 kb on + strand, within EX28DRAFT_3952 at 163.602 kb on - strand at 164.214 kb on + strand, within EX28DRAFT_3954 at 164.235 kb on - strand, within EX28DRAFT_3954 at 164.262 kb on - strand, within EX28DRAFT_3954 at 164.329 kb on + strand, within EX28DRAFT_3954 at 164.556 kb on + strand, within EX28DRAFT_3954
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 162,229 + EX28DRAFT_3951 0.46 +0.6 162,284 - EX28DRAFT_3951 0.49 -0.6 162,372 - EX28DRAFT_3951 0.55 +0.1 162,769 - EX28DRAFT_3951 0.82 -0.5 163,171 - EX28DRAFT_3952 0.22 -0.3 163,269 + EX28DRAFT_3952 0.38 -0.4 163,274 - EX28DRAFT_3952 0.39 -0.1 163,406 + EX28DRAFT_3952 0.61 +1.7 163,481 + EX28DRAFT_3952 0.74 +0.4 163,602 - +0.6 164,214 + EX28DRAFT_3954 0.11 +0.2 164,235 - EX28DRAFT_3954 0.12 -0.5 164,262 - EX28DRAFT_3954 0.14 +0.3 164,329 + EX28DRAFT_3954 0.18 +1.0 164,556 + EX28DRAFT_3954 0.31 +0.7
Or see this region's nucleotide sequence