Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3782 and EX28DRAFT_3783 are separated by 113 nucleotides EX28DRAFT_3783 and EX28DRAFT_3784 overlap by 4 nucleotides EX28DRAFT_3784 and EX28DRAFT_3785 are separated by 106 nucleotides
EX28DRAFT_3782: EX28DRAFT_3782 - prolyl-tRNA synthetase (EC 6.1.1.15), at 463,501 to 465,219
_3782
EX28DRAFT_3783: EX28DRAFT_3783 - tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA, at 465,333 to 466,040
_3783
EX28DRAFT_3784: EX28DRAFT_3784 - hypothetical protein, at 466,037 to 466,441
_3784
EX28DRAFT_3785: EX28DRAFT_3785 - lipoprotein, YaeC family, at 466,548 to 467,363
_3785
Position (kb) 465
466
467 Strain fitness (log2 ratio) -1
0
1
2 at 465.446 kb on - strand, within EX28DRAFT_3783 at 465.446 kb on - strand, within EX28DRAFT_3783 at 465.493 kb on - strand, within EX28DRAFT_3783 at 465.674 kb on + strand, within EX28DRAFT_3783 at 465.678 kb on + strand, within EX28DRAFT_3783 at 465.679 kb on - strand, within EX28DRAFT_3783 at 465.712 kb on - strand, within EX28DRAFT_3783 at 465.821 kb on + strand, within EX28DRAFT_3783 at 465.870 kb on + strand, within EX28DRAFT_3783 at 465.870 kb on + strand, within EX28DRAFT_3783 at 465.871 kb on - strand, within EX28DRAFT_3783 at 465.888 kb on + strand, within EX28DRAFT_3783 at 465.917 kb on - strand, within EX28DRAFT_3783 at 465.995 kb on - strand at 466.385 kb on + strand, within EX28DRAFT_3784 at 466.390 kb on + strand, within EX28DRAFT_3784 at 466.390 kb on + strand, within EX28DRAFT_3784 at 466.391 kb on - strand, within EX28DRAFT_3784 at 466.391 kb on - strand, within EX28DRAFT_3784 at 466.391 kb on - strand, within EX28DRAFT_3784 at 466.441 kb on + strand at 466.444 kb on + strand at 466.444 kb on + strand at 466.445 kb on - strand at 466.445 kb on - strand at 466.445 kb on - strand at 466.476 kb on - strand at 466.514 kb on - strand at 466.530 kb on + strand at 466.533 kb on + strand at 466.533 kb on + strand at 466.533 kb on + strand at 466.534 kb on - strand at 466.534 kb on - strand at 466.534 kb on - strand at 466.559 kb on + strand at 466.615 kb on + strand at 466.616 kb on - strand at 466.697 kb on + strand, within EX28DRAFT_3785 at 466.750 kb on + strand, within EX28DRAFT_3785 at 466.751 kb on - strand, within EX28DRAFT_3785 at 466.751 kb on - strand, within EX28DRAFT_3785
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 465,446 - EX28DRAFT_3783 0.16 +0.2 465,446 - EX28DRAFT_3783 0.16 +1.0 465,493 - EX28DRAFT_3783 0.23 -0.3 465,674 + EX28DRAFT_3783 0.48 +0.3 465,678 + EX28DRAFT_3783 0.49 -0.0 465,679 - EX28DRAFT_3783 0.49 +0.4 465,712 - EX28DRAFT_3783 0.54 -0.5 465,821 + EX28DRAFT_3783 0.69 +0.4 465,870 + EX28DRAFT_3783 0.76 +0.1 465,870 + EX28DRAFT_3783 0.76 -0.3 465,871 - EX28DRAFT_3783 0.76 -0.5 465,888 + EX28DRAFT_3783 0.78 +0.8 465,917 - EX28DRAFT_3783 0.82 +0.7 465,995 - +0.7 466,385 + EX28DRAFT_3784 0.86 -0.9 466,390 + EX28DRAFT_3784 0.87 +1.6 466,390 + EX28DRAFT_3784 0.87 +0.3 466,391 - EX28DRAFT_3784 0.87 +0.7 466,391 - EX28DRAFT_3784 0.87 +0.9 466,391 - EX28DRAFT_3784 0.87 -0.4 466,441 + +0.1 466,444 + +0.0 466,444 + +0.2 466,445 - -0.3 466,445 - +0.3 466,445 - -0.5 466,476 - +0.1 466,514 - +0.3 466,530 + +1.2 466,533 + -0.0 466,533 + -0.2 466,533 + +1.1 466,534 - +1.1 466,534 - +2.1 466,534 - +0.9 466,559 + -0.6 466,615 + -0.4 466,616 - +1.2 466,697 + EX28DRAFT_3785 0.18 -0.1 466,750 + EX28DRAFT_3785 0.25 +0.6 466,751 - EX28DRAFT_3785 0.25 +1.3 466,751 - EX28DRAFT_3785 0.25 +0.6
Or see this region's nucleotide sequence