Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3655 and EX28DRAFT_3656 are separated by 337 nucleotides EX28DRAFT_3656 and EX28DRAFT_3657 are separated by 128 nucleotides EX28DRAFT_3657 and EX28DRAFT_3658 are separated by 44 nucleotides
EX28DRAFT_3655: EX28DRAFT_3655 - ribulokinase, at 321,536 to 323,245
_3655
EX28DRAFT_3656: EX28DRAFT_3656 - AraC-type DNA-binding domain-containing proteins, at 323,583 to 324,428
_3656
EX28DRAFT_3657: EX28DRAFT_3657 - Uncharacterized membrane-associated protein, at 324,557 to 325,324
_3657
EX28DRAFT_3658: EX28DRAFT_3658 - thiamine ABC transporter, ATP-binding protein, at 325,369 to 326,070
_3658
Position (kb) 323
324
325 Strain fitness (log2 ratio) -1
0
1
2 at 322.794 kb on + strand, within EX28DRAFT_3655 at 322.795 kb on - strand, within EX28DRAFT_3655 at 322.818 kb on + strand, within EX28DRAFT_3655 at 323.072 kb on + strand, within EX28DRAFT_3655 at 323.072 kb on + strand, within EX28DRAFT_3655 at 323.072 kb on + strand, within EX28DRAFT_3655 at 323.073 kb on - strand, within EX28DRAFT_3655 at 323.073 kb on - strand, within EX28DRAFT_3655 at 323.074 kb on + strand, within EX28DRAFT_3655 at 323.074 kb on + strand, within EX28DRAFT_3655 at 323.074 kb on + strand, within EX28DRAFT_3655 at 323.074 kb on + strand, within EX28DRAFT_3655 at 323.075 kb on - strand at 323.076 kb on + strand at 323.165 kb on + strand at 323.183 kb on - strand at 323.401 kb on + strand at 323.477 kb on + strand at 323.478 kb on - strand at 323.521 kb on + strand at 323.532 kb on + strand at 323.716 kb on - strand, within EX28DRAFT_3656 at 323.826 kb on + strand, within EX28DRAFT_3656 at 324.041 kb on + strand, within EX28DRAFT_3656 at 324.135 kb on + strand, within EX28DRAFT_3656 at 324.135 kb on + strand, within EX28DRAFT_3656 at 324.136 kb on - strand, within EX28DRAFT_3656 at 324.136 kb on - strand, within EX28DRAFT_3656 at 324.250 kb on + strand, within EX28DRAFT_3656 at 324.360 kb on + strand at 324.360 kb on + strand at 324.360 kb on + strand at 324.481 kb on - strand at 324.556 kb on + strand at 324.556 kb on + strand at 324.557 kb on - strand at 324.580 kb on + strand at 324.580 kb on + strand at 324.580 kb on + strand at 324.581 kb on - strand at 324.595 kb on + strand at 324.599 kb on + strand at 324.600 kb on - strand at 324.600 kb on - strand at 324.799 kb on + strand, within EX28DRAFT_3657 at 324.800 kb on - strand, within EX28DRAFT_3657 at 325.019 kb on + strand, within EX28DRAFT_3657 at 325.019 kb on + strand, within EX28DRAFT_3657 at 325.020 kb on - strand, within EX28DRAFT_3657 at 325.088 kb on - strand, within EX28DRAFT_3657 at 325.190 kb on + strand, within EX28DRAFT_3657 at 325.191 kb on - strand, within EX28DRAFT_3657
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 322,794 + EX28DRAFT_3655 0.74 +0.7 322,795 - EX28DRAFT_3655 0.74 +1.4 322,818 + EX28DRAFT_3655 0.75 +1.1 323,072 + EX28DRAFT_3655 0.90 +0.3 323,072 + EX28DRAFT_3655 0.90 +0.3 323,072 + EX28DRAFT_3655 0.90 +0.0 323,073 - EX28DRAFT_3655 0.90 +1.2 323,073 - EX28DRAFT_3655 0.90 -1.2 323,074 + EX28DRAFT_3655 0.90 +0.8 323,074 + EX28DRAFT_3655 0.90 +0.2 323,074 + EX28DRAFT_3655 0.90 +0.6 323,074 + EX28DRAFT_3655 0.90 -1.1 323,075 - -0.3 323,076 + +0.1 323,165 + -0.6 323,183 - +0.3 323,401 + +0.2 323,477 + +0.1 323,478 - -0.2 323,521 + +1.3 323,532 + +1.3 323,716 - EX28DRAFT_3656 0.16 +0.0 323,826 + EX28DRAFT_3656 0.29 +0.9 324,041 + EX28DRAFT_3656 0.54 -0.2 324,135 + EX28DRAFT_3656 0.65 -0.6 324,135 + EX28DRAFT_3656 0.65 +1.1 324,136 - EX28DRAFT_3656 0.65 -1.1 324,136 - EX28DRAFT_3656 0.65 -0.1 324,250 + EX28DRAFT_3656 0.79 -0.8 324,360 + -0.0 324,360 + +0.2 324,360 + +1.8 324,481 - -0.9 324,556 + +0.1 324,556 + -0.4 324,557 - +0.7 324,580 + -0.2 324,580 + -0.6 324,580 + -0.1 324,581 - -0.0 324,595 + -0.6 324,599 + +0.6 324,600 - -0.3 324,600 - -0.2 324,799 + EX28DRAFT_3657 0.32 +0.0 324,800 - EX28DRAFT_3657 0.32 -0.0 325,019 + EX28DRAFT_3657 0.60 -0.1 325,019 + EX28DRAFT_3657 0.60 -0.1 325,020 - EX28DRAFT_3657 0.60 +1.1 325,088 - EX28DRAFT_3657 0.69 +0.2 325,190 + EX28DRAFT_3657 0.82 +0.4 325,191 - EX28DRAFT_3657 0.83 -0.3
Or see this region's nucleotide sequence