Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3489 and EX28DRAFT_3490 are separated by 300 nucleotides EX28DRAFT_3490 and EX28DRAFT_3491 are separated by 44 nucleotides EX28DRAFT_3491 and EX28DRAFT_3492 are separated by 199 nucleotides EX28DRAFT_3492 and EX28DRAFT_3493 overlap by 15 nucleotides
EX28DRAFT_3489: EX28DRAFT_3489 - Predicted restriction endonuclease, at 152,409 to 153,278
_3489
EX28DRAFT_3490: EX28DRAFT_3490 - Toxin SymE, type I toxin-antitoxin system, at 153,579 to 154,034
_3490
EX28DRAFT_3491: EX28DRAFT_3491 - tryptophanyl-tRNA synthetase (EC 6.1.1.2), at 154,079 to 155,080
_3491
EX28DRAFT_3492: EX28DRAFT_3492 - Lactoylglutathione lyase and related lyases, at 155,280 to 155,705
_3492
EX28DRAFT_3493: EX28DRAFT_3493 - Transcriptional regulators, at 155,691 to 156,698
_3493
Position (kb) 154
155
156 Strain fitness (log2 ratio) -1
0
1
2 at 153.107 kb on + strand, within EX28DRAFT_3489 at 153.301 kb on - strand at 153.301 kb on - strand at 153.431 kb on - strand at 153.435 kb on - strand at 153.451 kb on - strand at 153.488 kb on + strand at 153.489 kb on - strand at 153.781 kb on + strand, within EX28DRAFT_3490 at 153.792 kb on + strand, within EX28DRAFT_3490 at 153.792 kb on + strand, within EX28DRAFT_3490 at 153.803 kb on - strand, within EX28DRAFT_3490 at 153.896 kb on + strand, within EX28DRAFT_3490 at 153.897 kb on - strand, within EX28DRAFT_3490 at 153.897 kb on - strand, within EX28DRAFT_3490 at 153.897 kb on - strand, within EX28DRAFT_3490 at 153.926 kb on + strand, within EX28DRAFT_3490 at 153.927 kb on - strand, within EX28DRAFT_3490 at 153.942 kb on - strand, within EX28DRAFT_3490 at 153.943 kb on + strand, within EX28DRAFT_3490 at 153.947 kb on + strand, within EX28DRAFT_3490 at 153.948 kb on - strand, within EX28DRAFT_3490 at 154.007 kb on + strand at 154.039 kb on + strand at 154.040 kb on - strand at 154.068 kb on + strand at 154.068 kb on + strand at 154.197 kb on + strand, within EX28DRAFT_3491 at 154.197 kb on + strand, within EX28DRAFT_3491 at 154.197 kb on + strand, within EX28DRAFT_3491 at 154.197 kb on + strand, within EX28DRAFT_3491 at 154.197 kb on + strand, within EX28DRAFT_3491 at 154.197 kb on + strand, within EX28DRAFT_3491 at 154.197 kb on + strand, within EX28DRAFT_3491 at 154.198 kb on - strand, within EX28DRAFT_3491 at 154.198 kb on - strand, within EX28DRAFT_3491 at 154.198 kb on - strand, within EX28DRAFT_3491 at 154.198 kb on - strand, within EX28DRAFT_3491 at 154.347 kb on + strand, within EX28DRAFT_3491 at 154.351 kb on + strand, within EX28DRAFT_3491 at 154.352 kb on - strand, within EX28DRAFT_3491 at 154.414 kb on - strand, within EX28DRAFT_3491 at 154.696 kb on + strand, within EX28DRAFT_3491 at 154.696 kb on + strand, within EX28DRAFT_3491 at 154.697 kb on - strand, within EX28DRAFT_3491 at 154.792 kb on + strand, within EX28DRAFT_3491 at 154.792 kb on + strand, within EX28DRAFT_3491 at 154.792 kb on + strand, within EX28DRAFT_3491 at 154.793 kb on - strand, within EX28DRAFT_3491 at 154.794 kb on + strand, within EX28DRAFT_3491 at 154.795 kb on - strand, within EX28DRAFT_3491 at 154.795 kb on - strand, within EX28DRAFT_3491 at 154.795 kb on - strand, within EX28DRAFT_3491 at 155.092 kb on - strand at 155.226 kb on + strand at 155.227 kb on - strand at 155.227 kb on - strand at 155.394 kb on + strand, within EX28DRAFT_3492 at 155.394 kb on + strand, within EX28DRAFT_3492 at 155.448 kb on + strand, within EX28DRAFT_3492 at 155.449 kb on - strand, within EX28DRAFT_3492 at 155.473 kb on - strand, within EX28DRAFT_3492 at 155.490 kb on - strand, within EX28DRAFT_3492 at 155.687 kb on + strand at 155.687 kb on + strand at 155.687 kb on + strand at 155.713 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 153,107 + EX28DRAFT_3489 0.80 -0.1 153,301 - -0.1 153,301 - +0.3 153,431 - +1.2 153,435 - -0.0 153,451 - +0.4 153,488 + -1.5 153,489 - +0.0 153,781 + EX28DRAFT_3490 0.44 -0.3 153,792 + EX28DRAFT_3490 0.47 -0.5 153,792 + EX28DRAFT_3490 0.47 -0.2 153,803 - EX28DRAFT_3490 0.49 +0.1 153,896 + EX28DRAFT_3490 0.70 +0.2 153,897 - EX28DRAFT_3490 0.70 -1.2 153,897 - EX28DRAFT_3490 0.70 +0.9 153,897 - EX28DRAFT_3490 0.70 +0.8 153,926 + EX28DRAFT_3490 0.76 +0.1 153,927 - EX28DRAFT_3490 0.76 +0.9 153,942 - EX28DRAFT_3490 0.80 -0.3 153,943 + EX28DRAFT_3490 0.80 +0.2 153,947 + EX28DRAFT_3490 0.81 +0.0 153,948 - EX28DRAFT_3490 0.81 -1.0 154,007 + +0.2 154,039 + -0.7 154,040 - +0.9 154,068 + -0.6 154,068 + +0.3 154,197 + EX28DRAFT_3491 0.12 -0.5 154,197 + EX28DRAFT_3491 0.12 +0.1 154,197 + EX28DRAFT_3491 0.12 -0.5 154,197 + EX28DRAFT_3491 0.12 -0.9 154,197 + EX28DRAFT_3491 0.12 -0.4 154,197 + EX28DRAFT_3491 0.12 +0.5 154,197 + EX28DRAFT_3491 0.12 +0.1 154,198 - EX28DRAFT_3491 0.12 -0.1 154,198 - EX28DRAFT_3491 0.12 +0.2 154,198 - EX28DRAFT_3491 0.12 +0.3 154,198 - EX28DRAFT_3491 0.12 +0.1 154,347 + EX28DRAFT_3491 0.27 +0.0 154,351 + EX28DRAFT_3491 0.27 +0.4 154,352 - EX28DRAFT_3491 0.27 -0.4 154,414 - EX28DRAFT_3491 0.33 -0.7 154,696 + EX28DRAFT_3491 0.62 +0.1 154,696 + EX28DRAFT_3491 0.62 -0.7 154,697 - EX28DRAFT_3491 0.62 -0.4 154,792 + EX28DRAFT_3491 0.71 +0.1 154,792 + EX28DRAFT_3491 0.71 +0.1 154,792 + EX28DRAFT_3491 0.71 -0.1 154,793 - EX28DRAFT_3491 0.71 +0.1 154,794 + EX28DRAFT_3491 0.71 +0.4 154,795 - EX28DRAFT_3491 0.71 +0.3 154,795 - EX28DRAFT_3491 0.71 +0.6 154,795 - EX28DRAFT_3491 0.71 +0.0 155,092 - +0.1 155,226 + +0.4 155,227 - -0.3 155,227 - -0.5 155,394 + EX28DRAFT_3492 0.27 +0.3 155,394 + EX28DRAFT_3492 0.27 -1.2 155,448 + EX28DRAFT_3492 0.39 -0.2 155,449 - EX28DRAFT_3492 0.40 +0.0 155,473 - EX28DRAFT_3492 0.45 +1.3 155,490 - EX28DRAFT_3492 0.49 +2.4 155,687 + +0.5 155,687 + +0.1 155,687 + +0.2 155,713 - -0.6
Or see this region's nucleotide sequence