Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3370 and EX28DRAFT_3371 are separated by 56 nucleotides EX28DRAFT_3371 and EX28DRAFT_3372 are separated by 2 nucleotides
EX28DRAFT_3370: EX28DRAFT_3370 - GTP-binding protein HflX, at 37,975 to 39,255
_3370
EX28DRAFT_3371: EX28DRAFT_3371 - HflK protein, at 39,312 to 40,571
_3371
EX28DRAFT_3372: EX28DRAFT_3372 - HflC protein, at 40,574 to 41,578
_3372
Position (kb) 39
40
41 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 38.322 kb on + strand, within EX28DRAFT_3370 at 38.689 kb on - strand, within EX28DRAFT_3370 at 38.740 kb on - strand, within EX28DRAFT_3370 at 38.934 kb on + strand, within EX28DRAFT_3370 at 38.935 kb on - strand, within EX28DRAFT_3370 at 39.189 kb on + strand at 39.190 kb on - strand at 39.244 kb on + strand at 39.244 kb on + strand at 39.245 kb on - strand at 39.247 kb on - strand at 39.307 kb on + strand at 39.307 kb on + strand at 39.307 kb on + strand at 39.308 kb on - strand at 39.309 kb on + strand at 39.309 kb on + strand at 39.309 kb on + strand at 39.309 kb on + strand at 39.309 kb on + strand at 39.309 kb on + strand at 39.309 kb on + strand at 39.309 kb on + strand at 39.310 kb on - strand at 39.333 kb on - strand at 39.903 kb on + strand, within EX28DRAFT_3371 at 39.904 kb on - strand, within EX28DRAFT_3371 at 39.988 kb on - strand, within EX28DRAFT_3371 at 39.998 kb on + strand, within EX28DRAFT_3371 at 39.998 kb on + strand, within EX28DRAFT_3371 at 40.098 kb on + strand, within EX28DRAFT_3371 at 40.120 kb on - strand, within EX28DRAFT_3371 at 40.185 kb on + strand, within EX28DRAFT_3371 at 40.188 kb on - strand, within EX28DRAFT_3371 at 40.251 kb on + strand, within EX28DRAFT_3371 at 40.252 kb on - strand, within EX28DRAFT_3371 at 40.580 kb on - strand at 40.588 kb on + strand at 40.623 kb on - strand at 40.625 kb on - strand at 40.664 kb on - strand at 40.664 kb on - strand at 40.716 kb on - strand, within EX28DRAFT_3372 at 40.847 kb on + strand, within EX28DRAFT_3372 at 40.848 kb on - strand, within EX28DRAFT_3372 at 40.937 kb on - strand, within EX28DRAFT_3372 at 40.937 kb on - strand, within EX28DRAFT_3372 at 41.200 kb on + strand, within EX28DRAFT_3372 at 41.453 kb on + strand, within EX28DRAFT_3372 at 41.548 kb on + strand at 41.549 kb on - strand at 41.549 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 38,322 + EX28DRAFT_3370 0.27 -0.0 38,689 - EX28DRAFT_3370 0.56 -0.5 38,740 - EX28DRAFT_3370 0.60 -0.5 38,934 + EX28DRAFT_3370 0.75 -0.2 38,935 - EX28DRAFT_3370 0.75 -1.2 39,189 + -0.1 39,190 - -1.1 39,244 + -0.9 39,244 + -0.8 39,245 - -0.1 39,247 - -4.0 39,307 + -1.3 39,307 + +0.1 39,307 + -1.5 39,308 - -0.5 39,309 + -0.9 39,309 + -0.8 39,309 + -0.1 39,309 + -1.1 39,309 + -0.2 39,309 + -2.1 39,309 + +0.7 39,309 + +0.7 39,310 - +0.6 39,333 - -2.1 39,903 + EX28DRAFT_3371 0.47 -0.2 39,904 - EX28DRAFT_3371 0.47 +0.0 39,988 - EX28DRAFT_3371 0.54 -0.5 39,998 + EX28DRAFT_3371 0.54 -0.5 39,998 + EX28DRAFT_3371 0.54 -0.1 40,098 + EX28DRAFT_3371 0.62 +0.8 40,120 - EX28DRAFT_3371 0.64 +0.6 40,185 + EX28DRAFT_3371 0.69 -1.3 40,188 - EX28DRAFT_3371 0.70 -0.4 40,251 + EX28DRAFT_3371 0.75 -0.7 40,252 - EX28DRAFT_3371 0.75 +0.1 40,580 - +0.5 40,588 + -0.5 40,623 - -0.2 40,625 - -1.5 40,664 - -0.2 40,664 - -0.4 40,716 - EX28DRAFT_3372 0.14 -0.2 40,847 + EX28DRAFT_3372 0.27 +0.1 40,848 - EX28DRAFT_3372 0.27 -1.5 40,937 - EX28DRAFT_3372 0.36 -0.5 40,937 - EX28DRAFT_3372 0.36 -0.1 41,200 + EX28DRAFT_3372 0.62 -0.2 41,453 + EX28DRAFT_3372 0.87 -1.7 41,548 + +0.1 41,549 - -0.9 41,549 - +0.1
Or see this region's nucleotide sequence