Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3286 and EX28DRAFT_3287 are separated by 375 nucleotides EX28DRAFT_3287 and EX28DRAFT_3288 are separated by 111 nucleotides EX28DRAFT_3288 and EX28DRAFT_3289 are separated by 62 nucleotides EX28DRAFT_3289 and EX28DRAFT_3290 are separated by 45 nucleotides
EX28DRAFT_3286: EX28DRAFT_3286 - transcriptional regulator, ArgR family, at 584,115 to 584,585
_3286
EX28DRAFT_3287: EX28DRAFT_3287 - Protein of unknown function (DUF1471), at 584,961 to 585,224
_3287
EX28DRAFT_3288: EX28DRAFT_3288 - Protein of unknown function (DUF1471), at 585,336 to 585,602
_3288
EX28DRAFT_3289: EX28DRAFT_3289 - Barstar, RNAse (barnase) inhibitor, at 585,665 to 585,937
_3289
EX28DRAFT_3290: EX28DRAFT_3290 - succinate-semialdehyde dehydrogenase, at 585,983 to 587,437
_3290
Position (kb)
584
585
586 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 584.018 kb on + strand at 584.018 kb on + strand at 584.025 kb on - strand at 584.100 kb on + strand at 584.100 kb on + strand at 584.101 kb on - strand at 584.101 kb on - strand at 584.114 kb on + strand at 584.147 kb on - strand at 584.313 kb on + strand, within EX28DRAFT_3286 at 584.769 kb on + strand at 584.769 kb on + strand at 584.953 kb on + strand at 584.954 kb on - strand at 585.035 kb on + strand, within EX28DRAFT_3287 at 585.217 kb on - strand at 585.230 kb on - strand at 585.231 kb on - strand at 585.318 kb on + strand at 585.329 kb on - strand at 585.329 kb on - strand at 585.335 kb on + strand at 585.416 kb on - strand, within EX28DRAFT_3288 at 585.439 kb on + strand, within EX28DRAFT_3288 at 585.446 kb on + strand, within EX28DRAFT_3288 at 585.447 kb on - strand, within EX28DRAFT_3288 at 585.447 kb on - strand, within EX28DRAFT_3288 at 585.596 kb on + strand at 585.597 kb on - strand at 585.597 kb on - strand at 585.601 kb on - strand at 585.601 kb on - strand at 585.601 kb on - strand at 585.623 kb on + strand at 585.624 kb on - strand at 585.925 kb on + strand at 585.925 kb on + strand at 585.925 kb on + strand at 585.926 kb on - strand at 585.926 kb on - strand at 585.927 kb on + strand at 585.927 kb on + strand at 585.928 kb on - strand at 585.984 kb on + strand at 585.984 kb on + strand at 585.985 kb on - strand at 585.985 kb on - strand at 585.985 kb on - strand at 585.986 kb on + strand at 585.997 kb on + strand at 585.997 kb on + strand at 586.020 kb on + strand at 586.020 kb on + strand at 586.021 kb on - strand at 586.071 kb on - strand at 586.185 kb on + strand, within EX28DRAFT_3290 at 586.185 kb on + strand, within EX28DRAFT_3290
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 584,018 + -1.2 584,018 + +0.6 584,025 - -0.1 584,100 + +0.2 584,100 + -0.3 584,101 - -3.5 584,101 - -3.1 584,114 + -2.3 584,147 - -0.5 584,313 + EX28DRAFT_3286 0.42 -1.8 584,769 + +0.4 584,769 + -0.5 584,953 + -0.1 584,954 - +0.2 585,035 + EX28DRAFT_3287 0.28 +0.4 585,217 - +0.2 585,230 - -0.2 585,231 - +0.2 585,318 + -1.3 585,329 - -2.8 585,329 - +0.2 585,335 + -0.0 585,416 - EX28DRAFT_3288 0.30 -0.5 585,439 + EX28DRAFT_3288 0.39 +0.1 585,446 + EX28DRAFT_3288 0.41 -0.9 585,447 - EX28DRAFT_3288 0.42 +0.3 585,447 - EX28DRAFT_3288 0.42 +1.0 585,596 + -0.1 585,597 - +0.3 585,597 - +0.1 585,601 - +0.6 585,601 - +0.4 585,601 - -0.5 585,623 + +0.1 585,624 - +0.4 585,925 + +0.2 585,925 + +0.3 585,925 + +0.0 585,926 - -0.1 585,926 - -0.1 585,927 + +0.8 585,927 + +0.1 585,928 - -0.3 585,984 + -0.2 585,984 + +0.4 585,985 - -0.2 585,985 - -0.8 585,985 - +0.6 585,986 + -0.2 585,997 + -0.3 585,997 + -0.4 586,020 + -0.8 586,020 + -0.9 586,021 - +0.2 586,071 - -1.0 586,185 + EX28DRAFT_3290 0.14 -0.3 586,185 + EX28DRAFT_3290 0.14 -0.2
Or see this region's nucleotide sequence