Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3229 and EX28DRAFT_3230 are separated by 93 nucleotides EX28DRAFT_3230 and EX28DRAFT_3231 are separated by 88 nucleotides EX28DRAFT_3231 and EX28DRAFT_3232 are separated by 151 nucleotides EX28DRAFT_3232 and EX28DRAFT_3233 are separated by 74 nucleotides EX28DRAFT_3233 and EX28DRAFT_3234 are separated by 30 nucleotides
EX28DRAFT_3229: EX28DRAFT_3229 - ATP-dependent metalloprotease FtsH, at 526,923 to 528,866
_3229
EX28DRAFT_3230: EX28DRAFT_3230 - cell division protein FtsJ, at 528,960 to 529,586
_3230
EX28DRAFT_3231: EX28DRAFT_3231 - putative RNA-binding protein, YhbY family, at 529,675 to 530,007
_3231
EX28DRAFT_3232: EX28DRAFT_3232 - transcription elongation factor GreA, at 530,159 to 530,635
_3232
EX28DRAFT_3233: EX28DRAFT_3233 - RNA, at 530,710 to 530,833
_3233
EX28DRAFT_3234: EX28DRAFT_3234 - D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family, at 530,864 to 532,297
_3234
Position (kb) 529
530
531 Strain fitness (log2 ratio) -2
-1
0
1 at 528.917 kb on - strand at 529.729 kb on - strand, within EX28DRAFT_3231 at 529.933 kb on - strand, within EX28DRAFT_3231 at 529.933 kb on - strand, within EX28DRAFT_3231 at 529.951 kb on - strand, within EX28DRAFT_3231 at 529.978 kb on - strand at 530.093 kb on + strand at 530.144 kb on + strand at 530.160 kb on + strand at 530.161 kb on - strand at 530.368 kb on + strand, within EX28DRAFT_3232 at 530.390 kb on - strand, within EX28DRAFT_3232 at 530.444 kb on - strand, within EX28DRAFT_3232 at 530.450 kb on - strand, within EX28DRAFT_3232 at 530.453 kb on - strand, within EX28DRAFT_3232 at 530.613 kb on - strand at 530.613 kb on - strand at 530.641 kb on - strand at 530.642 kb on + strand at 530.643 kb on - strand at 530.765 kb on + strand, within EX28DRAFT_3233 at 530.790 kb on - strand, within EX28DRAFT_3233 at 530.826 kb on - strand at 530.826 kb on - strand at 530.829 kb on - strand at 530.905 kb on - strand at 530.939 kb on + strand at 530.940 kb on - strand at 530.940 kb on - strand at 530.944 kb on + strand at 530.944 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 528,917 - -1.3 529,729 - EX28DRAFT_3231 0.16 +0.0 529,933 - EX28DRAFT_3231 0.77 +0.8 529,933 - EX28DRAFT_3231 0.77 +0.1 529,951 - EX28DRAFT_3231 0.83 +0.5 529,978 - +0.2 530,093 + -0.4 530,144 + -0.2 530,160 + +0.2 530,161 - -1.4 530,368 + EX28DRAFT_3232 0.44 -0.7 530,390 - EX28DRAFT_3232 0.48 -0.1 530,444 - EX28DRAFT_3232 0.60 -1.3 530,450 - EX28DRAFT_3232 0.61 +0.1 530,453 - EX28DRAFT_3232 0.62 -0.5 530,613 - -1.9 530,613 - +0.1 530,641 - +0.2 530,642 + -0.2 530,643 - +0.5 530,765 + EX28DRAFT_3233 0.44 -0.1 530,790 - EX28DRAFT_3233 0.65 +1.4 530,826 - -0.2 530,826 - -0.1 530,829 - -1.3 530,905 - +0.3 530,939 + -0.2 530,940 - +0.2 530,940 - +0.2 530,944 + +0.4 530,944 + -0.1
Or see this region's nucleotide sequence