Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3135 and EX28DRAFT_3136 are separated by 0 nucleotides EX28DRAFT_3136 and EX28DRAFT_3137 are separated by 147 nucleotides EX28DRAFT_3137 and EX28DRAFT_3138 overlap by 4 nucleotides
EX28DRAFT_3135: EX28DRAFT_3135 - hypothetical protein, at 434,737 to 435,906
_3135
EX28DRAFT_3136: EX28DRAFT_3136 - Siderophore-interacting protein, at 435,907 to 436,671
_3136
EX28DRAFT_3137: EX28DRAFT_3137 - Predicted transcriptional regulators, at 436,819 to 437,313
_3137
EX28DRAFT_3138: EX28DRAFT_3138 - Methyl-accepting chemotaxis protein, at 437,310 to 438,869
_3138
Position (kb) 436
437
438 Strain fitness (log2 ratio) -1
0
1
2 at 436.022 kb on + strand, within EX28DRAFT_3136 at 436.022 kb on + strand, within EX28DRAFT_3136 at 436.023 kb on - strand, within EX28DRAFT_3136 at 436.023 kb on - strand, within EX28DRAFT_3136 at 436.023 kb on - strand, within EX28DRAFT_3136 at 436.124 kb on + strand, within EX28DRAFT_3136 at 436.125 kb on - strand, within EX28DRAFT_3136 at 436.131 kb on + strand, within EX28DRAFT_3136 at 436.132 kb on - strand, within EX28DRAFT_3136 at 436.133 kb on + strand, within EX28DRAFT_3136 at 436.133 kb on + strand, within EX28DRAFT_3136 at 436.134 kb on - strand, within EX28DRAFT_3136 at 436.245 kb on - strand, within EX28DRAFT_3136 at 436.400 kb on + strand, within EX28DRAFT_3136 at 436.412 kb on + strand, within EX28DRAFT_3136 at 436.412 kb on + strand, within EX28DRAFT_3136 at 436.412 kb on + strand, within EX28DRAFT_3136 at 436.432 kb on + strand, within EX28DRAFT_3136 at 436.432 kb on + strand, within EX28DRAFT_3136 at 436.515 kb on + strand, within EX28DRAFT_3136 at 436.638 kb on + strand at 436.662 kb on + strand at 436.663 kb on - strand at 436.663 kb on - strand at 436.695 kb on - strand at 436.702 kb on - strand at 437.213 kb on + strand, within EX28DRAFT_3137 at 437.474 kb on + strand, within EX28DRAFT_3138 at 437.474 kb on + strand, within EX28DRAFT_3138 at 437.475 kb on - strand, within EX28DRAFT_3138 at 437.475 kb on - strand, within EX28DRAFT_3138 at 438.275 kb on + strand, within EX28DRAFT_3138 at 438.309 kb on - strand, within EX28DRAFT_3138
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 436,022 + EX28DRAFT_3136 0.15 -0.2 436,022 + EX28DRAFT_3136 0.15 +0.4 436,023 - EX28DRAFT_3136 0.15 +0.7 436,023 - EX28DRAFT_3136 0.15 +0.4 436,023 - EX28DRAFT_3136 0.15 -0.2 436,124 + EX28DRAFT_3136 0.28 -0.1 436,125 - EX28DRAFT_3136 0.28 -0.2 436,131 + EX28DRAFT_3136 0.29 -0.3 436,132 - EX28DRAFT_3136 0.29 +0.1 436,133 + EX28DRAFT_3136 0.30 +1.0 436,133 + EX28DRAFT_3136 0.30 +0.2 436,134 - EX28DRAFT_3136 0.30 +0.6 436,245 - EX28DRAFT_3136 0.44 +2.4 436,400 + EX28DRAFT_3136 0.64 -0.8 436,412 + EX28DRAFT_3136 0.66 +0.6 436,412 + EX28DRAFT_3136 0.66 +0.4 436,412 + EX28DRAFT_3136 0.66 +0.5 436,432 + EX28DRAFT_3136 0.69 +0.3 436,432 + EX28DRAFT_3136 0.69 -0.1 436,515 + EX28DRAFT_3136 0.79 -0.7 436,638 + -0.4 436,662 + -0.5 436,663 - +0.4 436,663 - -1.2 436,695 - +0.9 436,702 - +0.3 437,213 + EX28DRAFT_3137 0.80 -0.8 437,474 + EX28DRAFT_3138 0.11 +0.0 437,474 + EX28DRAFT_3138 0.11 -0.1 437,475 - EX28DRAFT_3138 0.11 +0.0 437,475 - EX28DRAFT_3138 0.11 -0.0 438,275 + EX28DRAFT_3138 0.62 -0.1 438,309 - EX28DRAFT_3138 0.64 -0.5
Or see this region's nucleotide sequence