Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3039 and EX28DRAFT_3040 are separated by 93 nucleotides EX28DRAFT_3040 and EX28DRAFT_3041 are separated by 81 nucleotides EX28DRAFT_3041 and EX28DRAFT_3042 are separated by 103 nucleotides
EX28DRAFT_3039: EX28DRAFT_3039 - Predicted oxidoreductases (related to aryl-alcohol dehydrogenases), at 348,436 to 349,476
_3039
EX28DRAFT_3040: EX28DRAFT_3040 - TIGR00645 family protein, at 349,570 to 350,058
_3040
EX28DRAFT_3041: EX28DRAFT_3041 - hypothetical protein, at 350,140 to 350,643
_3041
EX28DRAFT_3042: EX28DRAFT_3042 - hypothetical protein, at 350,747 to 351,151
_3042
Position (kb) 349
350
351 Strain fitness (log2 ratio) -1
0
1 at 348.627 kb on + strand, within EX28DRAFT_3039 at 348.632 kb on - strand, within EX28DRAFT_3039 at 348.714 kb on + strand, within EX28DRAFT_3039 at 348.774 kb on + strand, within EX28DRAFT_3039 at 348.779 kb on - strand, within EX28DRAFT_3039 at 348.826 kb on + strand, within EX28DRAFT_3039 at 348.827 kb on - strand, within EX28DRAFT_3039 at 348.834 kb on + strand, within EX28DRAFT_3039 at 348.925 kb on + strand, within EX28DRAFT_3039 at 348.925 kb on + strand, within EX28DRAFT_3039 at 348.925 kb on + strand, within EX28DRAFT_3039 at 349.022 kb on - strand, within EX28DRAFT_3039 at 349.022 kb on - strand, within EX28DRAFT_3039 at 349.135 kb on + strand, within EX28DRAFT_3039 at 349.183 kb on - strand, within EX28DRAFT_3039 at 349.474 kb on + strand at 349.474 kb on + strand at 349.525 kb on + strand at 349.529 kb on + strand at 349.529 kb on + strand at 349.529 kb on + strand at 349.530 kb on - strand at 349.578 kb on + strand at 349.579 kb on - strand at 349.587 kb on + strand at 349.588 kb on - strand at 349.683 kb on + strand, within EX28DRAFT_3040 at 349.776 kb on + strand, within EX28DRAFT_3040 at 350.000 kb on + strand, within EX28DRAFT_3040 at 350.030 kb on + strand at 350.030 kb on + strand at 350.031 kb on - strand at 350.031 kb on - strand at 350.059 kb on - strand at 350.092 kb on + strand at 350.092 kb on + strand at 350.093 kb on - strand at 350.094 kb on + strand at 350.095 kb on - strand at 350.095 kb on - strand at 350.095 kb on - strand at 350.132 kb on + strand at 350.132 kb on + strand at 350.174 kb on + strand at 350.174 kb on + strand at 350.406 kb on + strand, within EX28DRAFT_3041 at 350.431 kb on - strand, within EX28DRAFT_3041 at 350.609 kb on - strand at 350.774 kb on - strand at 350.912 kb on - strand, within EX28DRAFT_3042 at 350.941 kb on - strand, within EX28DRAFT_3042
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 348,627 + EX28DRAFT_3039 0.18 +0.8 348,632 - EX28DRAFT_3039 0.19 +0.2 348,714 + EX28DRAFT_3039 0.27 +0.0 348,774 + EX28DRAFT_3039 0.32 +0.1 348,779 - EX28DRAFT_3039 0.33 -0.2 348,826 + EX28DRAFT_3039 0.37 -1.1 348,827 - EX28DRAFT_3039 0.38 -0.1 348,834 + EX28DRAFT_3039 0.38 -0.5 348,925 + EX28DRAFT_3039 0.47 +0.5 348,925 + EX28DRAFT_3039 0.47 +0.2 348,925 + EX28DRAFT_3039 0.47 +0.3 349,022 - EX28DRAFT_3039 0.56 -1.6 349,022 - EX28DRAFT_3039 0.56 -0.0 349,135 + EX28DRAFT_3039 0.67 -1.0 349,183 - EX28DRAFT_3039 0.72 +0.3 349,474 + -0.4 349,474 + -0.2 349,525 + +0.0 349,529 + -0.2 349,529 + -0.3 349,529 + -0.5 349,530 - -0.2 349,578 + +0.1 349,579 - -1.1 349,587 + +0.1 349,588 - +0.8 349,683 + EX28DRAFT_3040 0.23 +0.3 349,776 + EX28DRAFT_3040 0.42 -0.0 350,000 + EX28DRAFT_3040 0.88 +0.8 350,030 + +0.5 350,030 + -0.2 350,031 - +0.2 350,031 - -0.3 350,059 - -0.7 350,092 + -0.3 350,092 + +0.4 350,093 - +0.7 350,094 + +0.6 350,095 - +0.5 350,095 - -0.3 350,095 - +1.3 350,132 + -0.1 350,132 + -0.1 350,174 + +0.3 350,174 + -1.6 350,406 + EX28DRAFT_3041 0.53 +1.7 350,431 - EX28DRAFT_3041 0.58 -0.3 350,609 - -0.3 350,774 - +0.3 350,912 - EX28DRAFT_3042 0.41 +0.4 350,941 - EX28DRAFT_3042 0.48 +0.2
Or see this region's nucleotide sequence