Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2972 and EX28DRAFT_2973 are separated by 49 nucleotides EX28DRAFT_2973 and EX28DRAFT_2974 are separated by 341 nucleotides
EX28DRAFT_2972: EX28DRAFT_2972 - phosphoglycerate kinase (EC 2.7.2.3), at 281,661 to 282,824
_2972
EX28DRAFT_2973: EX28DRAFT_2973 - erythrose-4-phosphate dehydrogenase, at 282,874 to 283,893
_2973
EX28DRAFT_2974: EX28DRAFT_2974 - transketolase, bacterial and yeast, at 284,235 to 286,226
_2974
Position (kb) 282
283
284 Strain fitness (log2 ratio) -1
0
1 at 282.876 kb on - strand at 283.052 kb on - strand, within EX28DRAFT_2973 at 283.070 kb on - strand, within EX28DRAFT_2973 at 283.070 kb on - strand, within EX28DRAFT_2973 at 283.072 kb on - strand, within EX28DRAFT_2973 at 283.313 kb on + strand, within EX28DRAFT_2973 at 283.314 kb on - strand, within EX28DRAFT_2973 at 283.746 kb on - strand, within EX28DRAFT_2973 at 283.832 kb on - strand at 283.833 kb on - strand at 283.848 kb on + strand at 283.848 kb on + strand at 283.849 kb on - strand at 283.893 kb on + strand at 284.079 kb on - strand at 284.087 kb on + strand at 284.088 kb on - strand at 284.117 kb on + strand at 284.172 kb on + strand at 284.173 kb on - strand at 284.173 kb on - strand at 284.173 kb on - strand at 284.173 kb on - strand at 284.173 kb on - strand at 284.226 kb on + strand at 284.227 kb on - strand at 284.236 kb on + strand at 284.237 kb on - strand at 284.362 kb on + strand at 284.363 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 282,876 - +0.9 283,052 - EX28DRAFT_2973 0.17 +0.2 283,070 - EX28DRAFT_2973 0.19 -0.3 283,070 - EX28DRAFT_2973 0.19 -0.9 283,072 - EX28DRAFT_2973 0.19 +0.2 283,313 + EX28DRAFT_2973 0.43 +0.6 283,314 - EX28DRAFT_2973 0.43 +0.6 283,746 - EX28DRAFT_2973 0.85 +0.9 283,832 - +1.4 283,833 - -0.3 283,848 + +0.8 283,848 + +0.0 283,849 - +0.2 283,893 + -0.2 284,079 - +0.2 284,087 + +0.4 284,088 - -0.2 284,117 + -0.7 284,172 + -0.4 284,173 - +0.2 284,173 - +0.6 284,173 - +0.4 284,173 - -0.2 284,173 - -0.1 284,226 + -0.8 284,227 - +0.6 284,236 + +0.1 284,237 - -1.5 284,362 + +0.4 284,363 - +1.1
Or see this region's nucleotide sequence