Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2903 and EX28DRAFT_2904 are separated by 193 nucleotides EX28DRAFT_2904 and EX28DRAFT_2905 are separated by 12 nucleotides
EX28DRAFT_2903: EX28DRAFT_2903 - prolipoprotein diacylglyceryl transferase, at 212,894 to 213,769
_2903
EX28DRAFT_2904: EX28DRAFT_2904 - phosphoenolpyruvate-protein phosphotransferase, at 213,963 to 216,209
_2904
EX28DRAFT_2905: EX28DRAFT_2905 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 216,222 to 216,752
_2905
Position (kb)
213
214
215
216
217 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 213.791 kb on - strand at 213.862 kb on - strand at 213.897 kb on + strand at 213.898 kb on - strand at 213.909 kb on - strand at 213.911 kb on - strand at 213.918 kb on + strand at 214.094 kb on + strand at 214.094 kb on + strand at 214.095 kb on - strand at 214.095 kb on - strand at 214.108 kb on + strand at 214.108 kb on + strand at 214.109 kb on - strand at 214.109 kb on - strand at 214.215 kb on + strand, within EX28DRAFT_2904 at 214.228 kb on + strand, within EX28DRAFT_2904 at 214.291 kb on + strand, within EX28DRAFT_2904 at 214.291 kb on + strand, within EX28DRAFT_2904 at 214.334 kb on + strand, within EX28DRAFT_2904 at 214.334 kb on + strand, within EX28DRAFT_2904 at 214.334 kb on + strand, within EX28DRAFT_2904 at 214.335 kb on - strand, within EX28DRAFT_2904 at 214.335 kb on - strand, within EX28DRAFT_2904 at 214.336 kb on + strand, within EX28DRAFT_2904 at 214.336 kb on + strand, within EX28DRAFT_2904 at 214.336 kb on + strand, within EX28DRAFT_2904 at 214.337 kb on - strand, within EX28DRAFT_2904 at 214.337 kb on - strand, within EX28DRAFT_2904 at 214.367 kb on + strand, within EX28DRAFT_2904 at 214.400 kb on + strand, within EX28DRAFT_2904 at 214.545 kb on + strand, within EX28DRAFT_2904 at 214.546 kb on - strand, within EX28DRAFT_2904 at 214.679 kb on + strand, within EX28DRAFT_2904 at 214.681 kb on + strand, within EX28DRAFT_2904 at 214.681 kb on + strand, within EX28DRAFT_2904 at 214.681 kb on + strand, within EX28DRAFT_2904 at 214.682 kb on - strand, within EX28DRAFT_2904 at 214.682 kb on - strand, within EX28DRAFT_2904 at 214.682 kb on - strand, within EX28DRAFT_2904 at 214.682 kb on - strand, within EX28DRAFT_2904 at 214.763 kb on - strand, within EX28DRAFT_2904 at 214.828 kb on + strand, within EX28DRAFT_2904 at 214.922 kb on + strand, within EX28DRAFT_2904 at 214.922 kb on + strand, within EX28DRAFT_2904 at 214.965 kb on + strand, within EX28DRAFT_2904 at 214.966 kb on - strand, within EX28DRAFT_2904 at 214.996 kb on + strand, within EX28DRAFT_2904 at 215.056 kb on - strand, within EX28DRAFT_2904 at 215.132 kb on + strand, within EX28DRAFT_2904 at 215.276 kb on + strand, within EX28DRAFT_2904 at 215.533 kb on + strand, within EX28DRAFT_2904 at 215.814 kb on + strand, within EX28DRAFT_2904 at 215.815 kb on - strand, within EX28DRAFT_2904 at 215.815 kb on - strand, within EX28DRAFT_2904 at 215.815 kb on - strand, within EX28DRAFT_2904 at 215.917 kb on + strand, within EX28DRAFT_2904 at 215.917 kb on + strand, within EX28DRAFT_2904 at 215.918 kb on - strand, within EX28DRAFT_2904 at 215.921 kb on + strand, within EX28DRAFT_2904 at 215.990 kb on + strand at 215.991 kb on - strand at 216.058 kb on + strand at 216.059 kb on - strand at 216.061 kb on + strand at 216.061 kb on + strand at 216.062 kb on - strand at 216.088 kb on + strand at 216.141 kb on - strand at 216.187 kb on - strand at 216.218 kb on + strand at 216.219 kb on - strand at 216.224 kb on - strand at 216.234 kb on - strand at 216.776 kb on - strand at 216.777 kb on + strand at 216.778 kb on - strand at 216.779 kb on + strand at 216.780 kb on - strand at 216.780 kb on - strand at 216.780 kb on - strand at 216.780 kb on - strand at 216.825 kb on + strand at 216.825 kb on + strand at 216.840 kb on + strand at 216.866 kb on - strand at 216.930 kb on + strand at 216.930 kb on + strand at 216.931 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 213,791 - +0.0 213,862 - -0.1 213,897 + -0.8 213,898 - -0.3 213,909 - +0.5 213,911 - -0.2 213,918 + -0.5 214,094 + -1.1 214,094 + -1.9 214,095 - -1.6 214,095 - -2.8 214,108 + -3.0 214,108 + -1.1 214,109 - -1.6 214,109 - -1.9 214,215 + EX28DRAFT_2904 0.11 -1.6 214,228 + EX28DRAFT_2904 0.12 -3.0 214,291 + EX28DRAFT_2904 0.15 -1.8 214,291 + EX28DRAFT_2904 0.15 -2.3 214,334 + EX28DRAFT_2904 0.17 -1.5 214,334 + EX28DRAFT_2904 0.17 -1.3 214,334 + EX28DRAFT_2904 0.17 -1.7 214,335 - EX28DRAFT_2904 0.17 -0.9 214,335 - EX28DRAFT_2904 0.17 -1.8 214,336 + EX28DRAFT_2904 0.17 -1.5 214,336 + EX28DRAFT_2904 0.17 -1.5 214,336 + EX28DRAFT_2904 0.17 -2.2 214,337 - EX28DRAFT_2904 0.17 -0.8 214,337 - EX28DRAFT_2904 0.17 -0.3 214,367 + EX28DRAFT_2904 0.18 -1.5 214,400 + EX28DRAFT_2904 0.19 -0.9 214,545 + EX28DRAFT_2904 0.26 -2.0 214,546 - EX28DRAFT_2904 0.26 -1.3 214,679 + EX28DRAFT_2904 0.32 -2.1 214,681 + EX28DRAFT_2904 0.32 -1.6 214,681 + EX28DRAFT_2904 0.32 -1.9 214,681 + EX28DRAFT_2904 0.32 -1.4 214,682 - EX28DRAFT_2904 0.32 -2.3 214,682 - EX28DRAFT_2904 0.32 -1.0 214,682 - EX28DRAFT_2904 0.32 -3.5 214,682 - EX28DRAFT_2904 0.32 -2.3 214,763 - EX28DRAFT_2904 0.36 -2.5 214,828 + EX28DRAFT_2904 0.38 -1.7 214,922 + EX28DRAFT_2904 0.43 -1.2 214,922 + EX28DRAFT_2904 0.43 -2.0 214,965 + EX28DRAFT_2904 0.45 -1.4 214,966 - EX28DRAFT_2904 0.45 -2.0 214,996 + EX28DRAFT_2904 0.46 -1.6 215,056 - EX28DRAFT_2904 0.49 -1.0 215,132 + EX28DRAFT_2904 0.52 -1.9 215,276 + EX28DRAFT_2904 0.58 -2.1 215,533 + EX28DRAFT_2904 0.70 -1.4 215,814 + EX28DRAFT_2904 0.82 -2.3 215,815 - EX28DRAFT_2904 0.82 -2.0 215,815 - EX28DRAFT_2904 0.82 -1.9 215,815 - EX28DRAFT_2904 0.82 -1.7 215,917 + EX28DRAFT_2904 0.87 -0.8 215,917 + EX28DRAFT_2904 0.87 -2.0 215,918 - EX28DRAFT_2904 0.87 -1.5 215,921 + EX28DRAFT_2904 0.87 -2.3 215,990 + -1.3 215,991 - -1.8 216,058 + -1.1 216,059 - +0.7 216,061 + -1.7 216,061 + -1.2 216,062 - -2.0 216,088 + -1.2 216,141 - -1.2 216,187 - -1.1 216,218 + -1.7 216,219 - +0.8 216,224 - +0.0 216,234 - +0.5 216,776 - -1.0 216,777 + +0.6 216,778 - +0.6 216,779 + -2.0 216,780 - -0.1 216,780 - -0.5 216,780 - +0.4 216,780 - +0.5 216,825 + +0.7 216,825 + +0.0 216,840 + +0.0 216,866 - +1.6 216,930 + -0.5 216,930 + +0.4 216,931 - -0.3
Or see this region's nucleotide sequence