Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2858 and EX28DRAFT_2859 overlap by 44 nucleotides EX28DRAFT_2859 and EX28DRAFT_2860 are separated by 219 nucleotides EX28DRAFT_2860 and EX28DRAFT_2861 are separated by 53 nucleotides
EX28DRAFT_2858: EX28DRAFT_2858 - transcriptional regulator, RpiR family, at 160,388 to 161,212
_2858
EX28DRAFT_2859: EX28DRAFT_2859 - hypothetical protein, at 161,169 to 161,351
_2859
EX28DRAFT_2860: EX28DRAFT_2860 - Male sterility protein, at 161,571 to 162,680
_2860
EX28DRAFT_2861: EX28DRAFT_2861 - phosphopyruvate hydratase, at 162,734 to 164,032
_2861
Position (kb) 161
162
163 Strain fitness (log2 ratio) -2
-1
0
1 at 160.587 kb on - strand, within EX28DRAFT_2858 at 160.775 kb on + strand, within EX28DRAFT_2858 at 160.817 kb on + strand, within EX28DRAFT_2858 at 161.073 kb on + strand, within EX28DRAFT_2858 at 161.073 kb on + strand, within EX28DRAFT_2858 at 161.095 kb on + strand, within EX28DRAFT_2858 at 161.249 kb on + strand, within EX28DRAFT_2859 at 161.249 kb on + strand, within EX28DRAFT_2859 at 161.555 kb on + strand at 161.570 kb on - strand at 161.581 kb on + strand at 161.768 kb on + strand, within EX28DRAFT_2860 at 161.769 kb on - strand, within EX28DRAFT_2860 at 161.772 kb on - strand, within EX28DRAFT_2860 at 161.846 kb on + strand, within EX28DRAFT_2860 at 161.847 kb on - strand, within EX28DRAFT_2860 at 162.058 kb on - strand, within EX28DRAFT_2860 at 162.225 kb on - strand, within EX28DRAFT_2860 at 162.267 kb on + strand, within EX28DRAFT_2860 at 162.287 kb on - strand, within EX28DRAFT_2860 at 162.420 kb on + strand, within EX28DRAFT_2860 at 162.421 kb on - strand, within EX28DRAFT_2860 at 162.421 kb on - strand, within EX28DRAFT_2860 at 162.421 kb on - strand, within EX28DRAFT_2860 at 162.435 kb on + strand, within EX28DRAFT_2860 at 162.521 kb on - strand, within EX28DRAFT_2860 at 162.522 kb on + strand, within EX28DRAFT_2860 at 162.542 kb on + strand, within EX28DRAFT_2860 at 162.563 kb on + strand, within EX28DRAFT_2860 at 162.675 kb on - strand at 162.728 kb on - strand at 162.735 kb on + strand at 162.768 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 160,587 - EX28DRAFT_2858 0.24 -1.8 160,775 + EX28DRAFT_2858 0.47 -0.6 160,817 + EX28DRAFT_2858 0.52 +0.1 161,073 + EX28DRAFT_2858 0.83 -0.1 161,073 + EX28DRAFT_2858 0.83 -1.0 161,095 + EX28DRAFT_2858 0.86 +0.0 161,249 + EX28DRAFT_2859 0.44 -0.4 161,249 + EX28DRAFT_2859 0.44 +0.0 161,555 + -0.5 161,570 - +0.3 161,581 + +0.1 161,768 + EX28DRAFT_2860 0.18 -0.3 161,769 - EX28DRAFT_2860 0.18 +0.0 161,772 - EX28DRAFT_2860 0.18 -0.6 161,846 + EX28DRAFT_2860 0.25 -0.1 161,847 - EX28DRAFT_2860 0.25 -0.4 162,058 - EX28DRAFT_2860 0.44 -0.3 162,225 - EX28DRAFT_2860 0.59 +0.5 162,267 + EX28DRAFT_2860 0.63 +0.2 162,287 - EX28DRAFT_2860 0.65 -0.2 162,420 + EX28DRAFT_2860 0.76 -1.1 162,421 - EX28DRAFT_2860 0.77 -0.2 162,421 - EX28DRAFT_2860 0.77 -0.5 162,421 - EX28DRAFT_2860 0.77 +0.2 162,435 + EX28DRAFT_2860 0.78 +0.1 162,521 - EX28DRAFT_2860 0.86 -0.6 162,522 + EX28DRAFT_2860 0.86 -0.2 162,542 + EX28DRAFT_2860 0.87 +0.0 162,563 + EX28DRAFT_2860 0.89 -0.7 162,675 - +0.2 162,728 - -1.2 162,735 + +0.2 162,768 + +0.5
Or see this region's nucleotide sequence