Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2850

Experiment: MS_media with arsenate 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2849 and EX28DRAFT_2850 are separated by 237 nucleotidesEX28DRAFT_2850 and EX28DRAFT_2851 are separated by 71 nucleotidesEX28DRAFT_2851 and EX28DRAFT_2852 are separated by 15 nucleotides EX28DRAFT_2849: EX28DRAFT_2849 - uroporphyrin-III C-methyltransferase, at 149,497 to 150,855 _2849 EX28DRAFT_2850: EX28DRAFT_2850 - Predicted aminopeptidases, at 151,093 to 152,136 _2850 EX28DRAFT_2851: EX28DRAFT_2851 - phosphoadenosine phosphosulfate reductase, thioredoxin dependent, at 152,208 to 152,942 _2851 EX28DRAFT_2852: EX28DRAFT_2852 - sulfite reductase (NADPH) hemoprotein, beta-component, at 152,958 to 154,670 _2852 Position (kb) 151 152 153Strain fitness (log2 ratio) -3 -2 -1 0 1at 150.685 kb on + strand, within EX28DRAFT_2849at 150.838 kb on + strandat 150.848 kb on + strandat 150.893 kb on - strandat 150.893 kb on - strandat 150.893 kb on - strandat 150.907 kb on - strandat 150.922 kb on - strandat 150.971 kb on - strandat 150.971 kb on - strandat 151.053 kb on + strandat 151.054 kb on - strandat 151.065 kb on + strandat 151.065 kb on + strandat 151.066 kb on - strandat 151.066 kb on - strandat 151.147 kb on - strandat 151.147 kb on - strandat 151.177 kb on + strandat 151.209 kb on + strand, within EX28DRAFT_2850at 151.210 kb on - strand, within EX28DRAFT_2850at 151.340 kb on - strand, within EX28DRAFT_2850at 151.340 kb on - strand, within EX28DRAFT_2850at 151.341 kb on + strand, within EX28DRAFT_2850at 151.342 kb on - strand, within EX28DRAFT_2850at 151.342 kb on - strand, within EX28DRAFT_2850at 151.371 kb on + strand, within EX28DRAFT_2850at 151.372 kb on - strand, within EX28DRAFT_2850at 151.386 kb on + strand, within EX28DRAFT_2850at 151.431 kb on + strand, within EX28DRAFT_2850at 151.431 kb on + strand, within EX28DRAFT_2850at 151.450 kb on - strand, within EX28DRAFT_2850at 151.454 kb on - strand, within EX28DRAFT_2850at 151.729 kb on + strand, within EX28DRAFT_2850at 151.730 kb on - strand, within EX28DRAFT_2850at 151.915 kb on + strand, within EX28DRAFT_2850at 151.915 kb on + strand, within EX28DRAFT_2850at 151.916 kb on - strand, within EX28DRAFT_2850at 151.916 kb on - strand, within EX28DRAFT_2850at 152.143 kb on + strandat 152.144 kb on - strandat 152.163 kb on - strandat 152.163 kb on - strandat 152.365 kb on + strand, within EX28DRAFT_2851at 152.632 kb on + strand, within EX28DRAFT_2851at 152.676 kb on - strand, within EX28DRAFT_2851at 152.778 kb on - strand, within EX28DRAFT_2851at 152.800 kb on + strand, within EX28DRAFT_2851at 152.942 kb on + strandat 152.942 kb on + strandat 152.942 kb on + strandat 152.942 kb on + strandat 152.943 kb on - strandat 152.943 kb on - strandat 152.943 kb on - strandat 152.943 kb on - strandat 152.946 kb on + strandat 152.947 kb on - strandat 152.947 kb on - strandat 152.947 kb on - strandat 152.947 kb on - strandat 153.018 kb on - strandat 153.123 kb on - strandat 153.123 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM
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150,685 + EX28DRAFT_2849 0.87 -1.2
150,838 + -1.0
150,848 + -1.4
150,893 - -1.2
150,893 - -0.8
150,893 - -0.5
150,907 - -1.3
150,922 - -0.7
150,971 - -0.4
150,971 - +0.2
151,053 + -0.3
151,054 - -0.7
151,065 + -1.7
151,065 + +0.3
151,066 - +0.7
151,066 - +0.2
151,147 - -0.6
151,147 - +0.5
151,177 + +0.5
151,209 + EX28DRAFT_2850 0.11 +0.7
151,210 - EX28DRAFT_2850 0.11 +0.6
151,340 - EX28DRAFT_2850 0.24 -0.2
151,340 - EX28DRAFT_2850 0.24 +0.7
151,341 + EX28DRAFT_2850 0.24 +0.2
151,342 - EX28DRAFT_2850 0.24 +0.5
151,342 - EX28DRAFT_2850 0.24 +0.4
151,371 + EX28DRAFT_2850 0.27 +0.1
151,372 - EX28DRAFT_2850 0.27 -0.5
151,386 + EX28DRAFT_2850 0.28 +1.0
151,431 + EX28DRAFT_2850 0.32 +0.6
151,431 + EX28DRAFT_2850 0.32 +0.9
151,450 - EX28DRAFT_2850 0.34 +0.3
151,454 - EX28DRAFT_2850 0.35 +1.0
151,729 + EX28DRAFT_2850 0.61 -0.1
151,730 - EX28DRAFT_2850 0.61 -0.3
151,915 + EX28DRAFT_2850 0.79 +0.7
151,915 + EX28DRAFT_2850 0.79 +0.7
151,916 - EX28DRAFT_2850 0.79 +0.3
151,916 - EX28DRAFT_2850 0.79 +0.1
152,143 + +0.2
152,144 - -0.0
152,163 - -0.1
152,163 - -0.1
152,365 + EX28DRAFT_2851 0.21 -2.1
152,632 + EX28DRAFT_2851 0.58 -1.6
152,676 - EX28DRAFT_2851 0.64 -3.4
152,778 - EX28DRAFT_2851 0.78 -1.7
152,800 + EX28DRAFT_2851 0.81 -1.4
152,942 + -1.2
152,942 + -2.7
152,942 + -1.5
152,942 + -1.6
152,943 - -0.9
152,943 - +1.0
152,943 - -2.7
152,943 - -3.3
152,946 + -2.6
152,947 - -1.4
152,947 - -1.6
152,947 - -2.6
152,947 - -3.2
153,018 - -0.5
153,123 - -1.6
153,123 - -1.1

Or see this region's nucleotide sequence