Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2656 and EX28DRAFT_2657 are separated by 77 nucleotides EX28DRAFT_2657 and EX28DRAFT_2658 are separated by 107 nucleotides EX28DRAFT_2658 and EX28DRAFT_2659 are separated by 2 nucleotides
EX28DRAFT_2656: EX28DRAFT_2656 - Xaa-His dipeptidase, at 2,693,458 to 2,694,915
_2656
EX28DRAFT_2657: EX28DRAFT_2657 - Nucleotidyltransferase/DNA polymerase involved in DNA repair, at 2,694,993 to 2,696,051
_2657
EX28DRAFT_2658: EX28DRAFT_2658 - Uncharacterized protein conserved in bacteria, at 2,696,159 to 2,696,359
_2658
EX28DRAFT_2659: EX28DRAFT_2659 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit, at 2,696,362 to 2,697,585
_2659
Position (kb)
2694
2695
2696
2697 Strain fitness (log2 ratio)
-1
0
1
2 at 2694.303 kb on - strand, within EX28DRAFT_2656 at 2694.305 kb on - strand, within EX28DRAFT_2656 at 2694.578 kb on - strand, within EX28DRAFT_2656 at 2694.714 kb on + strand, within EX28DRAFT_2656 at 2694.910 kb on - strand at 2694.913 kb on + strand at 2694.914 kb on - strand at 2694.914 kb on - strand at 2694.916 kb on + strand at 2694.961 kb on - strand at 2695.249 kb on + strand, within EX28DRAFT_2657 at 2695.567 kb on + strand, within EX28DRAFT_2657 at 2695.567 kb on + strand, within EX28DRAFT_2657 at 2695.568 kb on - strand, within EX28DRAFT_2657 at 2695.583 kb on + strand, within EX28DRAFT_2657 at 2695.584 kb on - strand, within EX28DRAFT_2657 at 2695.772 kb on + strand, within EX28DRAFT_2657 at 2695.772 kb on + strand, within EX28DRAFT_2657 at 2695.772 kb on + strand, within EX28DRAFT_2657 at 2695.773 kb on - strand, within EX28DRAFT_2657 at 2695.773 kb on - strand, within EX28DRAFT_2657 at 2695.773 kb on - strand, within EX28DRAFT_2657 at 2695.773 kb on - strand, within EX28DRAFT_2657 at 2695.815 kb on - strand, within EX28DRAFT_2657 at 2695.864 kb on - strand, within EX28DRAFT_2657 at 2696.051 kb on + strand at 2696.055 kb on - strand at 2696.077 kb on - strand at 2696.081 kb on - strand at 2696.083 kb on - strand at 2696.160 kb on + strand at 2696.161 kb on - strand at 2696.165 kb on - strand at 2696.165 kb on - strand at 2696.424 kb on + strand at 2696.460 kb on + strand at 2696.460 kb on + strand at 2696.460 kb on + strand at 2696.460 kb on + strand at 2696.461 kb on - strand at 2696.461 kb on - strand at 2696.461 kb on - strand at 2696.461 kb on - strand at 2696.462 kb on + strand at 2696.462 kb on + strand at 2696.462 kb on + strand at 2696.462 kb on + strand at 2696.462 kb on + strand at 2696.462 kb on + strand at 2696.462 kb on + strand at 2696.463 kb on - strand at 2696.463 kb on - strand at 2696.463 kb on - strand at 2696.463 kb on - strand at 2696.463 kb on - strand at 2696.463 kb on - strand at 2696.634 kb on - strand, within EX28DRAFT_2659 at 2696.634 kb on - strand, within EX28DRAFT_2659 at 2696.679 kb on + strand, within EX28DRAFT_2659 at 2696.679 kb on + strand, within EX28DRAFT_2659 at 2696.679 kb on + strand, within EX28DRAFT_2659 at 2696.846 kb on + strand, within EX28DRAFT_2659 at 2696.846 kb on + strand, within EX28DRAFT_2659 at 2696.847 kb on - strand, within EX28DRAFT_2659 at 2696.986 kb on + strand, within EX28DRAFT_2659 at 2696.987 kb on - strand, within EX28DRAFT_2659 at 2696.987 kb on - strand, within EX28DRAFT_2659
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,694,303 - EX28DRAFT_2656 0.58 +0.2 2,694,305 - EX28DRAFT_2656 0.58 -0.1 2,694,578 - EX28DRAFT_2656 0.77 -1.2 2,694,714 + EX28DRAFT_2656 0.86 +0.5 2,694,910 - +0.1 2,694,913 + -0.2 2,694,914 - -1.1 2,694,914 - -0.1 2,694,916 + -0.7 2,694,961 - +0.2 2,695,249 + EX28DRAFT_2657 0.24 +1.1 2,695,567 + EX28DRAFT_2657 0.54 +0.2 2,695,567 + EX28DRAFT_2657 0.54 -0.2 2,695,568 - EX28DRAFT_2657 0.54 +0.2 2,695,583 + EX28DRAFT_2657 0.56 -0.4 2,695,584 - EX28DRAFT_2657 0.56 +0.3 2,695,772 + EX28DRAFT_2657 0.74 -0.0 2,695,772 + EX28DRAFT_2657 0.74 -0.1 2,695,772 + EX28DRAFT_2657 0.74 -0.6 2,695,773 - EX28DRAFT_2657 0.74 -0.2 2,695,773 - EX28DRAFT_2657 0.74 +0.5 2,695,773 - EX28DRAFT_2657 0.74 -0.3 2,695,773 - EX28DRAFT_2657 0.74 +1.0 2,695,815 - EX28DRAFT_2657 0.78 +0.5 2,695,864 - EX28DRAFT_2657 0.82 -0.4 2,696,051 + -0.5 2,696,055 - -0.5 2,696,077 - +0.1 2,696,081 - -0.6 2,696,083 - +0.1 2,696,160 + -0.4 2,696,161 - +0.3 2,696,165 - +0.2 2,696,165 - -0.0 2,696,424 + +1.8 2,696,460 + -0.4 2,696,460 + +0.5 2,696,460 + -0.0 2,696,460 + -0.4 2,696,461 - -0.3 2,696,461 - +0.3 2,696,461 - +0.3 2,696,461 - -0.8 2,696,462 + +0.3 2,696,462 + -0.1 2,696,462 + -0.5 2,696,462 + +0.5 2,696,462 + -0.1 2,696,462 + -0.1 2,696,462 + -0.3 2,696,463 - -0.4 2,696,463 - +0.3 2,696,463 - -0.6 2,696,463 - +0.4 2,696,463 - -0.3 2,696,463 - +0.3 2,696,634 - EX28DRAFT_2659 0.22 -0.6 2,696,634 - EX28DRAFT_2659 0.22 -0.4 2,696,679 + EX28DRAFT_2659 0.26 -0.3 2,696,679 + EX28DRAFT_2659 0.26 -0.2 2,696,679 + EX28DRAFT_2659 0.26 +0.4 2,696,846 + EX28DRAFT_2659 0.40 +0.6 2,696,846 + EX28DRAFT_2659 0.40 -0.2 2,696,847 - EX28DRAFT_2659 0.40 +1.0 2,696,986 + EX28DRAFT_2659 0.51 -0.3 2,696,987 - EX28DRAFT_2659 0.51 -0.0 2,696,987 - EX28DRAFT_2659 0.51 -0.0
Or see this region's nucleotide sequence