Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2574 and EX28DRAFT_2575 are separated by 21 nucleotides EX28DRAFT_2575 and EX28DRAFT_2576 are separated by 187 nucleotides EX28DRAFT_2576 and EX28DRAFT_2577 overlap by 4 nucleotides
EX28DRAFT_2574: EX28DRAFT_2574 - phosphate regulon sensor kinase PhoR, at 2,608,796 to 2,610,091
_2574
EX28DRAFT_2575: EX28DRAFT_2575 - phosphate regulon transcriptional regulatory protein PhoB, at 2,610,113 to 2,610,802
_2575
EX28DRAFT_2576: EX28DRAFT_2576 - Exodeoxyribonuclease I subunit D (EC 3.1.11.1), at 2,610,990 to 2,612,195
_2576
EX28DRAFT_2577: EX28DRAFT_2577 - exonuclease SbcC, at 2,612,192 to 2,615,323
_2577
Position (kb)
2610
2611
2612
2613 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5
6 at 2610.044 kb on + strand at 2610.044 kb on + strand at 2610.208 kb on + strand, within EX28DRAFT_2575 at 2610.212 kb on + strand, within EX28DRAFT_2575 at 2610.213 kb on - strand, within EX28DRAFT_2575 at 2610.213 kb on - strand, within EX28DRAFT_2575 at 2610.213 kb on - strand, within EX28DRAFT_2575 at 2610.213 kb on - strand, within EX28DRAFT_2575 at 2610.237 kb on + strand, within EX28DRAFT_2575 at 2610.238 kb on - strand, within EX28DRAFT_2575 at 2610.238 kb on - strand, within EX28DRAFT_2575 at 2610.238 kb on - strand, within EX28DRAFT_2575 at 2610.244 kb on + strand, within EX28DRAFT_2575 at 2610.259 kb on + strand, within EX28DRAFT_2575 at 2610.331 kb on + strand, within EX28DRAFT_2575 at 2610.455 kb on - strand, within EX28DRAFT_2575 at 2610.455 kb on - strand, within EX28DRAFT_2575 at 2610.493 kb on + strand, within EX28DRAFT_2575 at 2610.493 kb on + strand, within EX28DRAFT_2575 at 2610.498 kb on + strand, within EX28DRAFT_2575 at 2610.498 kb on + strand, within EX28DRAFT_2575 at 2610.498 kb on + strand, within EX28DRAFT_2575 at 2610.499 kb on - strand, within EX28DRAFT_2575 at 2610.700 kb on - strand, within EX28DRAFT_2575 at 2610.779 kb on + strand at 2610.779 kb on + strand at 2610.791 kb on - strand at 2610.818 kb on - strand at 2610.818 kb on - strand at 2610.822 kb on + strand at 2610.855 kb on + strand at 2610.856 kb on - strand at 2610.856 kb on - strand at 2610.919 kb on + strand at 2610.919 kb on + strand at 2610.920 kb on - strand at 2610.955 kb on + strand at 2610.955 kb on + strand at 2610.956 kb on - strand at 2610.989 kb on + strand at 2610.989 kb on + strand at 2610.997 kb on + strand at 2610.997 kb on + strand at 2610.997 kb on + strand at 2611.162 kb on - strand, within EX28DRAFT_2576 at 2611.162 kb on - strand, within EX28DRAFT_2576 at 2611.176 kb on + strand, within EX28DRAFT_2576 at 2611.447 kb on + strand, within EX28DRAFT_2576 at 2611.448 kb on - strand, within EX28DRAFT_2576 at 2611.467 kb on + strand, within EX28DRAFT_2576 at 2611.467 kb on + strand, within EX28DRAFT_2576 at 2611.576 kb on + strand, within EX28DRAFT_2576 at 2611.576 kb on + strand, within EX28DRAFT_2576 at 2611.577 kb on - strand, within EX28DRAFT_2576 at 2611.587 kb on + strand, within EX28DRAFT_2576 at 2611.587 kb on + strand, within EX28DRAFT_2576 at 2611.587 kb on + strand, within EX28DRAFT_2576 at 2611.587 kb on + strand, within EX28DRAFT_2576 at 2611.587 kb on + strand, within EX28DRAFT_2576 at 2611.587 kb on + strand, within EX28DRAFT_2576 at 2611.587 kb on + strand, within EX28DRAFT_2576 at 2611.587 kb on + strand, within EX28DRAFT_2576 at 2611.588 kb on - strand, within EX28DRAFT_2576 at 2611.588 kb on - strand, within EX28DRAFT_2576 at 2611.588 kb on - strand, within EX28DRAFT_2576 at 2611.588 kb on - strand, within EX28DRAFT_2576 at 2611.588 kb on - strand, within EX28DRAFT_2576 at 2611.588 kb on - strand, within EX28DRAFT_2576 at 2611.588 kb on - strand, within EX28DRAFT_2576 at 2611.639 kb on - strand, within EX28DRAFT_2576 at 2611.996 kb on + strand, within EX28DRAFT_2576 at 2612.003 kb on - strand, within EX28DRAFT_2576 at 2612.451 kb on + strand at 2612.621 kb on + strand, within EX28DRAFT_2577 at 2612.736 kb on - strand, within EX28DRAFT_2577 at 2612.875 kb on + strand, within EX28DRAFT_2577 at 2613.138 kb on + strand, within EX28DRAFT_2577 at 2613.138 kb on + strand, within EX28DRAFT_2577 at 2613.150 kb on + strand, within EX28DRAFT_2577 at 2613.151 kb on - strand, within EX28DRAFT_2577
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,610,044 + +6.3 2,610,044 + +5.8 2,610,208 + EX28DRAFT_2575 0.14 -1.0 2,610,212 + EX28DRAFT_2575 0.14 -1.0 2,610,213 - EX28DRAFT_2575 0.14 -0.3 2,610,213 - EX28DRAFT_2575 0.14 -1.4 2,610,213 - EX28DRAFT_2575 0.14 +0.7 2,610,213 - EX28DRAFT_2575 0.14 -0.3 2,610,237 + EX28DRAFT_2575 0.18 -1.2 2,610,238 - EX28DRAFT_2575 0.18 +0.4 2,610,238 - EX28DRAFT_2575 0.18 -0.6 2,610,238 - EX28DRAFT_2575 0.18 -1.5 2,610,244 + EX28DRAFT_2575 0.19 -1.3 2,610,259 + EX28DRAFT_2575 0.21 -0.6 2,610,331 + EX28DRAFT_2575 0.32 -0.9 2,610,455 - EX28DRAFT_2575 0.50 -1.0 2,610,455 - EX28DRAFT_2575 0.50 -0.3 2,610,493 + EX28DRAFT_2575 0.55 +0.3 2,610,493 + EX28DRAFT_2575 0.55 -1.5 2,610,498 + EX28DRAFT_2575 0.56 -0.5 2,610,498 + EX28DRAFT_2575 0.56 -0.4 2,610,498 + EX28DRAFT_2575 0.56 -1.4 2,610,499 - EX28DRAFT_2575 0.56 -0.3 2,610,700 - EX28DRAFT_2575 0.85 +0.2 2,610,779 + -0.9 2,610,779 + -0.7 2,610,791 - -0.3 2,610,818 - -0.6 2,610,818 - -0.4 2,610,822 + +0.3 2,610,855 + -0.1 2,610,856 - +0.8 2,610,856 - +2.2 2,610,919 + -0.3 2,610,919 + +1.1 2,610,920 - +1.5 2,610,955 + +1.0 2,610,955 + +0.4 2,610,956 - +0.7 2,610,989 + +1.0 2,610,989 + +1.3 2,610,997 + +0.1 2,610,997 + -0.3 2,610,997 + +0.1 2,611,162 - EX28DRAFT_2576 0.14 +1.6 2,611,162 - EX28DRAFT_2576 0.14 +0.5 2,611,176 + EX28DRAFT_2576 0.15 +0.2 2,611,447 + EX28DRAFT_2576 0.38 +0.7 2,611,448 - EX28DRAFT_2576 0.38 +1.2 2,611,467 + EX28DRAFT_2576 0.40 +0.0 2,611,467 + EX28DRAFT_2576 0.40 +0.2 2,611,576 + EX28DRAFT_2576 0.49 -0.7 2,611,576 + EX28DRAFT_2576 0.49 +0.3 2,611,577 - EX28DRAFT_2576 0.49 +0.7 2,611,587 + EX28DRAFT_2576 0.50 +0.3 2,611,587 + EX28DRAFT_2576 0.50 +0.2 2,611,587 + EX28DRAFT_2576 0.50 +0.7 2,611,587 + EX28DRAFT_2576 0.50 -0.2 2,611,587 + EX28DRAFT_2576 0.50 +0.8 2,611,587 + EX28DRAFT_2576 0.50 +0.1 2,611,587 + EX28DRAFT_2576 0.50 +0.2 2,611,587 + EX28DRAFT_2576 0.50 -0.3 2,611,588 - EX28DRAFT_2576 0.50 +0.7 2,611,588 - EX28DRAFT_2576 0.50 +0.5 2,611,588 - EX28DRAFT_2576 0.50 +0.5 2,611,588 - EX28DRAFT_2576 0.50 +1.5 2,611,588 - EX28DRAFT_2576 0.50 +0.8 2,611,588 - EX28DRAFT_2576 0.50 +1.0 2,611,588 - EX28DRAFT_2576 0.50 +0.4 2,611,639 - EX28DRAFT_2576 0.54 +0.8 2,611,996 + EX28DRAFT_2576 0.83 +0.3 2,612,003 - EX28DRAFT_2576 0.84 +0.6 2,612,451 + -0.0 2,612,621 + EX28DRAFT_2577 0.14 +0.5 2,612,736 - EX28DRAFT_2577 0.17 -0.2 2,612,875 + EX28DRAFT_2577 0.22 -0.0 2,613,138 + EX28DRAFT_2577 0.30 +0.2 2,613,138 + EX28DRAFT_2577 0.30 -0.1 2,613,150 + EX28DRAFT_2577 0.31 +0.5 2,613,151 - EX28DRAFT_2577 0.31 -1.1
Or see this region's nucleotide sequence