Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2313

Experiment: MS_media with arsenate 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2311 and EX28DRAFT_2312 overlap by 4 nucleotidesEX28DRAFT_2312 and EX28DRAFT_2313 are separated by 44 nucleotidesEX28DRAFT_2313 and EX28DRAFT_2314 are separated by 5 nucleotides EX28DRAFT_2311: EX28DRAFT_2311 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 2,336,646 to 2,337,692 _2311 EX28DRAFT_2312: EX28DRAFT_2312 - probable rRNA maturation factor YbeY, at 2,337,689 to 2,338,156 _2312 EX28DRAFT_2313: EX28DRAFT_2313 - Putative Mg2+ and Co2+ transporter CorC, at 2,338,201 to 2,339,124 _2313 EX28DRAFT_2314: EX28DRAFT_2314 - apolipoprotein N-acyltransferase, at 2,339,130 to 2,340,668 _2314 Position (kb) 2338 2339 2340Strain fitness (log2 ratio) -3 -2 -1 0 1at 2337.327 kb on + strand, within EX28DRAFT_2311at 2337.327 kb on + strand, within EX28DRAFT_2311at 2337.327 kb on + strand, within EX28DRAFT_2311at 2337.428 kb on + strand, within EX28DRAFT_2311at 2337.635 kb on + strandat 2337.659 kb on + strandat 2338.220 kb on + strandat 2338.287 kb on + strandat 2338.404 kb on + strand, within EX28DRAFT_2313at 2338.405 kb on - strand, within EX28DRAFT_2313at 2338.405 kb on - strand, within EX28DRAFT_2313at 2338.662 kb on - strand, within EX28DRAFT_2313at 2339.064 kb on + strandat 2339.064 kb on + strandat 2339.069 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM
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2,337,327 + EX28DRAFT_2311 0.65 -0.3
2,337,327 + EX28DRAFT_2311 0.65 -0.3
2,337,327 + EX28DRAFT_2311 0.65 +0.3
2,337,428 + EX28DRAFT_2311 0.75 -1.1
2,337,635 + -0.3
2,337,659 + -0.2
2,338,220 + -0.9
2,338,287 + -3.0
2,338,404 + EX28DRAFT_2313 0.22 -1.0
2,338,405 - EX28DRAFT_2313 0.22 -1.6
2,338,405 - EX28DRAFT_2313 0.22 -0.8
2,338,662 - EX28DRAFT_2313 0.50 -3.3
2,339,064 + -1.1
2,339,064 + -0.2
2,339,069 + -1.0

Or see this region's nucleotide sequence