Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2311 and EX28DRAFT_2312 overlap by 4 nucleotides EX28DRAFT_2312 and EX28DRAFT_2313 are separated by 44 nucleotides EX28DRAFT_2313 and EX28DRAFT_2314 are separated by 5 nucleotides
EX28DRAFT_2311: EX28DRAFT_2311 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 2,336,646 to 2,337,692
_2311
EX28DRAFT_2312: EX28DRAFT_2312 - probable rRNA maturation factor YbeY, at 2,337,689 to 2,338,156
_2312
EX28DRAFT_2313: EX28DRAFT_2313 - Putative Mg2+ and Co2+ transporter CorC, at 2,338,201 to 2,339,124
_2313
EX28DRAFT_2314: EX28DRAFT_2314 - apolipoprotein N-acyltransferase, at 2,339,130 to 2,340,668
_2314
Position (kb)
2338
2339
2340 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2337.327 kb on + strand, within EX28DRAFT_2311 at 2337.327 kb on + strand, within EX28DRAFT_2311 at 2337.327 kb on + strand, within EX28DRAFT_2311 at 2337.428 kb on + strand, within EX28DRAFT_2311 at 2337.635 kb on + strand at 2337.659 kb on + strand at 2338.220 kb on + strand at 2338.287 kb on + strand at 2338.404 kb on + strand, within EX28DRAFT_2313 at 2338.405 kb on - strand, within EX28DRAFT_2313 at 2338.405 kb on - strand, within EX28DRAFT_2313 at 2338.662 kb on - strand, within EX28DRAFT_2313 at 2339.064 kb on + strand at 2339.064 kb on + strand at 2339.069 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,337,327 + EX28DRAFT_2311 0.65 -0.3 2,337,327 + EX28DRAFT_2311 0.65 -0.3 2,337,327 + EX28DRAFT_2311 0.65 +0.3 2,337,428 + EX28DRAFT_2311 0.75 -1.1 2,337,635 + -0.3 2,337,659 + -0.2 2,338,220 + -0.9 2,338,287 + -3.0 2,338,404 + EX28DRAFT_2313 0.22 -1.0 2,338,405 - EX28DRAFT_2313 0.22 -1.6 2,338,405 - EX28DRAFT_2313 0.22 -0.8 2,338,662 - EX28DRAFT_2313 0.50 -3.3 2,339,064 + -1.1 2,339,064 + -0.2 2,339,069 + -1.0
Or see this region's nucleotide sequence