Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2195 and EX28DRAFT_2196 overlap by 4 nucleotides EX28DRAFT_2196 and EX28DRAFT_2197 overlap by 8 nucleotides EX28DRAFT_2197 and EX28DRAFT_2198 overlap by 11 nucleotides
EX28DRAFT_2195: EX28DRAFT_2195 - transcriptional regulator, TetR family, at 2,219,102 to 2,219,779
_2195
EX28DRAFT_2196: EX28DRAFT_2196 - Multidrug resistance efflux pump, at 2,219,776 to 2,220,771
_2196
EX28DRAFT_2197: EX28DRAFT_2197 - ABC-type multidrug transport system, ATPase component, at 2,220,764 to 2,222,503
_2197
EX28DRAFT_2198: EX28DRAFT_2198 - ABC-type multidrug transport system, permease component, at 2,222,493 to 2,223,626
_2198
Position (kb)
2220
2221
2222
2223 Strain fitness (log2 ratio)
-1
0
1
2 at 2219.866 kb on - strand at 2219.895 kb on + strand, within EX28DRAFT_2196 at 2219.911 kb on - strand, within EX28DRAFT_2196 at 2220.064 kb on + strand, within EX28DRAFT_2196 at 2220.065 kb on - strand, within EX28DRAFT_2196 at 2220.124 kb on - strand, within EX28DRAFT_2196 at 2220.278 kb on + strand, within EX28DRAFT_2196 at 2220.279 kb on - strand, within EX28DRAFT_2196 at 2220.393 kb on - strand, within EX28DRAFT_2196 at 2220.562 kb on + strand, within EX28DRAFT_2196 at 2220.564 kb on + strand, within EX28DRAFT_2196 at 2220.564 kb on + strand, within EX28DRAFT_2196 at 2220.740 kb on + strand at 2220.740 kb on + strand at 2220.863 kb on + strand at 2221.013 kb on + strand, within EX28DRAFT_2197 at 2221.013 kb on + strand, within EX28DRAFT_2197 at 2221.037 kb on + strand, within EX28DRAFT_2197 at 2221.139 kb on - strand, within EX28DRAFT_2197 at 2221.269 kb on + strand, within EX28DRAFT_2197 at 2221.270 kb on - strand, within EX28DRAFT_2197 at 2221.629 kb on + strand, within EX28DRAFT_2197 at 2221.720 kb on + strand, within EX28DRAFT_2197 at 2221.720 kb on + strand, within EX28DRAFT_2197 at 2221.721 kb on - strand, within EX28DRAFT_2197 at 2221.979 kb on + strand, within EX28DRAFT_2197 at 2221.979 kb on + strand, within EX28DRAFT_2197 at 2221.980 kb on - strand, within EX28DRAFT_2197 at 2221.981 kb on + strand, within EX28DRAFT_2197 at 2221.981 kb on + strand, within EX28DRAFT_2197 at 2221.981 kb on + strand, within EX28DRAFT_2197 at 2221.982 kb on - strand, within EX28DRAFT_2197 at 2222.158 kb on + strand, within EX28DRAFT_2197 at 2222.336 kb on + strand at 2222.501 kb on + strand at 2222.615 kb on + strand, within EX28DRAFT_2198 at 2222.616 kb on - strand, within EX28DRAFT_2198 at 2222.634 kb on - strand, within EX28DRAFT_2198 at 2222.846 kb on + strand, within EX28DRAFT_2198 at 2222.847 kb on - strand, within EX28DRAFT_2198 at 2222.870 kb on + strand, within EX28DRAFT_2198 at 2223.039 kb on - strand, within EX28DRAFT_2198 at 2223.062 kb on + strand, within EX28DRAFT_2198 at 2223.192 kb on + strand, within EX28DRAFT_2198 at 2223.195 kb on + strand, within EX28DRAFT_2198 at 2223.196 kb on - strand, within EX28DRAFT_2198 at 2223.196 kb on - strand, within EX28DRAFT_2198 at 2223.196 kb on - strand, within EX28DRAFT_2198 at 2223.196 kb on - strand, within EX28DRAFT_2198 at 2223.308 kb on - strand, within EX28DRAFT_2198 at 2223.441 kb on - strand, within EX28DRAFT_2198 at 2223.468 kb on + strand, within EX28DRAFT_2198 at 2223.468 kb on + strand, within EX28DRAFT_2198 at 2223.468 kb on + strand, within EX28DRAFT_2198 at 2223.468 kb on + strand, within EX28DRAFT_2198 at 2223.468 kb on + strand, within EX28DRAFT_2198 at 2223.469 kb on - strand, within EX28DRAFT_2198 at 2223.469 kb on - strand, within EX28DRAFT_2198 at 2223.469 kb on - strand, within EX28DRAFT_2198 at 2223.469 kb on - strand, within EX28DRAFT_2198 at 2223.469 kb on - strand, within EX28DRAFT_2198 at 2223.469 kb on - strand, within EX28DRAFT_2198 at 2223.469 kb on - strand, within EX28DRAFT_2198 at 2223.469 kb on - strand, within EX28DRAFT_2198 at 2223.473 kb on + strand, within EX28DRAFT_2198
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,219,866 - -1.0 2,219,895 + EX28DRAFT_2196 0.12 -0.7 2,219,911 - EX28DRAFT_2196 0.14 +1.2 2,220,064 + EX28DRAFT_2196 0.29 -0.0 2,220,065 - EX28DRAFT_2196 0.29 +0.7 2,220,124 - EX28DRAFT_2196 0.35 +0.3 2,220,278 + EX28DRAFT_2196 0.50 -0.1 2,220,279 - EX28DRAFT_2196 0.51 +0.4 2,220,393 - EX28DRAFT_2196 0.62 -0.5 2,220,562 + EX28DRAFT_2196 0.79 -0.4 2,220,564 + EX28DRAFT_2196 0.79 +0.5 2,220,564 + EX28DRAFT_2196 0.79 +1.2 2,220,740 + +0.0 2,220,740 + -0.9 2,220,863 + -0.7 2,221,013 + EX28DRAFT_2197 0.14 -0.1 2,221,013 + EX28DRAFT_2197 0.14 -0.1 2,221,037 + EX28DRAFT_2197 0.16 -0.1 2,221,139 - EX28DRAFT_2197 0.22 +0.0 2,221,269 + EX28DRAFT_2197 0.29 +0.6 2,221,270 - EX28DRAFT_2197 0.29 +0.4 2,221,629 + EX28DRAFT_2197 0.50 +0.1 2,221,720 + EX28DRAFT_2197 0.55 +0.4 2,221,720 + EX28DRAFT_2197 0.55 +0.2 2,221,721 - EX28DRAFT_2197 0.55 -0.7 2,221,979 + EX28DRAFT_2197 0.70 +0.1 2,221,979 + EX28DRAFT_2197 0.70 +2.4 2,221,980 - EX28DRAFT_2197 0.70 -0.2 2,221,981 + EX28DRAFT_2197 0.70 +0.7 2,221,981 + EX28DRAFT_2197 0.70 -0.1 2,221,981 + EX28DRAFT_2197 0.70 +0.5 2,221,982 - EX28DRAFT_2197 0.70 -0.1 2,222,158 + EX28DRAFT_2197 0.80 -0.0 2,222,336 + -0.1 2,222,501 + -0.7 2,222,615 + EX28DRAFT_2198 0.11 +0.7 2,222,616 - EX28DRAFT_2198 0.11 +1.3 2,222,634 - EX28DRAFT_2198 0.12 +0.7 2,222,846 + EX28DRAFT_2198 0.31 +1.0 2,222,847 - EX28DRAFT_2198 0.31 +0.5 2,222,870 + EX28DRAFT_2198 0.33 +0.9 2,223,039 - EX28DRAFT_2198 0.48 -0.3 2,223,062 + EX28DRAFT_2198 0.50 +0.4 2,223,192 + EX28DRAFT_2198 0.62 -0.5 2,223,195 + EX28DRAFT_2198 0.62 -1.7 2,223,196 - EX28DRAFT_2198 0.62 +0.0 2,223,196 - EX28DRAFT_2198 0.62 -1.3 2,223,196 - EX28DRAFT_2198 0.62 +0.0 2,223,196 - EX28DRAFT_2198 0.62 -0.1 2,223,308 - EX28DRAFT_2198 0.72 +1.1 2,223,441 - EX28DRAFT_2198 0.84 +0.8 2,223,468 + EX28DRAFT_2198 0.86 -0.5 2,223,468 + EX28DRAFT_2198 0.86 -0.0 2,223,468 + EX28DRAFT_2198 0.86 -0.2 2,223,468 + EX28DRAFT_2198 0.86 -0.5 2,223,468 + EX28DRAFT_2198 0.86 +0.0 2,223,469 - EX28DRAFT_2198 0.86 +0.6 2,223,469 - EX28DRAFT_2198 0.86 +0.7 2,223,469 - EX28DRAFT_2198 0.86 +0.2 2,223,469 - EX28DRAFT_2198 0.86 -0.4 2,223,469 - EX28DRAFT_2198 0.86 +0.4 2,223,469 - EX28DRAFT_2198 0.86 -0.1 2,223,469 - EX28DRAFT_2198 0.86 -1.4 2,223,469 - EX28DRAFT_2198 0.86 +0.4 2,223,473 + EX28DRAFT_2198 0.86 -0.1
Or see this region's nucleotide sequence