Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2063 and EX28DRAFT_2064 are separated by 10 nucleotides EX28DRAFT_2064 and EX28DRAFT_2065 are separated by 92 nucleotides
EX28DRAFT_2063: EX28DRAFT_2063 - L-threonine aldolase (EC 4.1.2.5), at 2,086,671 to 2,087,672
_2063
EX28DRAFT_2064: EX28DRAFT_2064 - Predicted nucleoside-diphosphate-sugar epimerases, at 2,087,683 to 2,089,119
_2064
EX28DRAFT_2065: EX28DRAFT_2065 - Nucleoside-diphosphate-sugar epimerases, at 2,089,212 to 2,090,225
_2065
Position (kb)
2087
2088
2089
2090 Strain fitness (log2 ratio)
-2
-1
0
1 at 2086.896 kb on + strand, within EX28DRAFT_2063 at 2086.896 kb on + strand, within EX28DRAFT_2063 at 2086.923 kb on + strand, within EX28DRAFT_2063 at 2086.923 kb on + strand, within EX28DRAFT_2063 at 2086.923 kb on + strand, within EX28DRAFT_2063 at 2086.923 kb on + strand, within EX28DRAFT_2063 at 2086.923 kb on + strand, within EX28DRAFT_2063 at 2086.924 kb on - strand, within EX28DRAFT_2063 at 2086.924 kb on - strand, within EX28DRAFT_2063 at 2086.924 kb on - strand, within EX28DRAFT_2063 at 2086.924 kb on - strand, within EX28DRAFT_2063 at 2086.924 kb on - strand, within EX28DRAFT_2063 at 2086.924 kb on - strand, within EX28DRAFT_2063 at 2087.112 kb on + strand, within EX28DRAFT_2063 at 2087.112 kb on + strand, within EX28DRAFT_2063 at 2087.177 kb on + strand, within EX28DRAFT_2063 at 2087.200 kb on - strand, within EX28DRAFT_2063 at 2087.307 kb on + strand, within EX28DRAFT_2063 at 2087.307 kb on + strand, within EX28DRAFT_2063 at 2087.366 kb on + strand, within EX28DRAFT_2063 at 2087.389 kb on - strand, within EX28DRAFT_2063 at 2087.601 kb on - strand at 2087.601 kb on - strand at 2087.719 kb on + strand at 2087.720 kb on - strand at 2087.722 kb on - strand at 2087.896 kb on + strand, within EX28DRAFT_2064 at 2087.897 kb on - strand, within EX28DRAFT_2064 at 2087.932 kb on - strand, within EX28DRAFT_2064 at 2088.250 kb on + strand, within EX28DRAFT_2064 at 2088.250 kb on + strand, within EX28DRAFT_2064 at 2088.326 kb on - strand, within EX28DRAFT_2064 at 2089.122 kb on - strand at 2089.211 kb on + strand at 2089.211 kb on + strand at 2089.539 kb on - strand, within EX28DRAFT_2065 at 2089.544 kb on + strand, within EX28DRAFT_2065 at 2089.544 kb on + strand, within EX28DRAFT_2065 at 2089.545 kb on - strand, within EX28DRAFT_2065 at 2089.545 kb on - strand, within EX28DRAFT_2065 at 2089.692 kb on - strand, within EX28DRAFT_2065 at 2089.692 kb on - strand, within EX28DRAFT_2065 at 2089.749 kb on - strand, within EX28DRAFT_2065 at 2089.779 kb on + strand, within EX28DRAFT_2065 at 2089.830 kb on + strand, within EX28DRAFT_2065 at 2089.831 kb on - strand, within EX28DRAFT_2065 at 2089.831 kb on - strand, within EX28DRAFT_2065 at 2089.831 kb on - strand, within EX28DRAFT_2065 at 2089.905 kb on + strand, within EX28DRAFT_2065 at 2089.905 kb on + strand, within EX28DRAFT_2065 at 2089.905 kb on + strand, within EX28DRAFT_2065 at 2089.957 kb on + strand, within EX28DRAFT_2065 at 2090.049 kb on - strand, within EX28DRAFT_2065 at 2090.087 kb on - strand, within EX28DRAFT_2065 at 2090.097 kb on - strand, within EX28DRAFT_2065
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,086,896 + EX28DRAFT_2063 0.22 -1.1 2,086,896 + EX28DRAFT_2063 0.22 -0.2 2,086,923 + EX28DRAFT_2063 0.25 -0.4 2,086,923 + EX28DRAFT_2063 0.25 +0.1 2,086,923 + EX28DRAFT_2063 0.25 +0.1 2,086,923 + EX28DRAFT_2063 0.25 -0.1 2,086,923 + EX28DRAFT_2063 0.25 -0.0 2,086,924 - EX28DRAFT_2063 0.25 -0.6 2,086,924 - EX28DRAFT_2063 0.25 -1.1 2,086,924 - EX28DRAFT_2063 0.25 +1.4 2,086,924 - EX28DRAFT_2063 0.25 +0.7 2,086,924 - EX28DRAFT_2063 0.25 -2.4 2,086,924 - EX28DRAFT_2063 0.25 +1.1 2,087,112 + EX28DRAFT_2063 0.44 +0.6 2,087,112 + EX28DRAFT_2063 0.44 -0.2 2,087,177 + EX28DRAFT_2063 0.50 +0.4 2,087,200 - EX28DRAFT_2063 0.53 -0.3 2,087,307 + EX28DRAFT_2063 0.63 -0.3 2,087,307 + EX28DRAFT_2063 0.63 +0.5 2,087,366 + EX28DRAFT_2063 0.69 +1.1 2,087,389 - EX28DRAFT_2063 0.72 -0.3 2,087,601 - +0.7 2,087,601 - -0.1 2,087,719 + -0.0 2,087,720 - +0.3 2,087,722 - -1.2 2,087,896 + EX28DRAFT_2064 0.15 -0.5 2,087,897 - EX28DRAFT_2064 0.15 +0.2 2,087,932 - EX28DRAFT_2064 0.17 -0.4 2,088,250 + EX28DRAFT_2064 0.39 -0.5 2,088,250 + EX28DRAFT_2064 0.39 -0.1 2,088,326 - EX28DRAFT_2064 0.45 -0.4 2,089,122 - +0.2 2,089,211 + -1.3 2,089,211 + -0.4 2,089,539 - EX28DRAFT_2065 0.32 -2.4 2,089,544 + EX28DRAFT_2065 0.33 -0.4 2,089,544 + EX28DRAFT_2065 0.33 -1.1 2,089,545 - EX28DRAFT_2065 0.33 -0.1 2,089,545 - EX28DRAFT_2065 0.33 -0.1 2,089,692 - EX28DRAFT_2065 0.47 -0.3 2,089,692 - EX28DRAFT_2065 0.47 -0.4 2,089,749 - EX28DRAFT_2065 0.53 +1.4 2,089,779 + EX28DRAFT_2065 0.56 -0.4 2,089,830 + EX28DRAFT_2065 0.61 +0.9 2,089,831 - EX28DRAFT_2065 0.61 +0.6 2,089,831 - EX28DRAFT_2065 0.61 +0.2 2,089,831 - EX28DRAFT_2065 0.61 -0.2 2,089,905 + EX28DRAFT_2065 0.68 -0.8 2,089,905 + EX28DRAFT_2065 0.68 -1.0 2,089,905 + EX28DRAFT_2065 0.68 +0.3 2,089,957 + EX28DRAFT_2065 0.73 +1.3 2,090,049 - EX28DRAFT_2065 0.83 -0.5 2,090,087 - EX28DRAFT_2065 0.86 -0.7 2,090,097 - EX28DRAFT_2065 0.87 -0.7
Or see this region's nucleotide sequence