Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1770 and EX28DRAFT_1771 are separated by 60 nucleotides EX28DRAFT_1771 and EX28DRAFT_1772 are separated by 41 nucleotides EX28DRAFT_1772 and EX28DRAFT_1773 are separated by 340 nucleotides
EX28DRAFT_1770: EX28DRAFT_1770 - Chitinase, at 1,786,001 to 1,787,257
_1770
EX28DRAFT_1771: EX28DRAFT_1771 - Uncharacterized protein conserved in bacteria, at 1,787,318 to 1,787,596
_1771
EX28DRAFT_1772: EX28DRAFT_1772 - methionine-R-sulfoxide reductase, at 1,787,638 to 1,788,051
_1772
EX28DRAFT_1773: EX28DRAFT_1773 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 1,788,392 to 1,789,387
_1773
Position (kb)
1787
1788 Strain fitness (log2 ratio)
-2
-1
0
1 at 1786.427 kb on + strand, within EX28DRAFT_1770 at 1786.428 kb on - strand, within EX28DRAFT_1770 at 1786.622 kb on - strand, within EX28DRAFT_1770 at 1786.646 kb on + strand, within EX28DRAFT_1770 at 1786.647 kb on - strand, within EX28DRAFT_1770 at 1786.647 kb on - strand, within EX28DRAFT_1770 at 1786.664 kb on + strand, within EX28DRAFT_1770 at 1786.706 kb on + strand, within EX28DRAFT_1770 at 1786.706 kb on + strand, within EX28DRAFT_1770 at 1786.707 kb on - strand, within EX28DRAFT_1770 at 1786.707 kb on - strand, within EX28DRAFT_1770 at 1786.748 kb on + strand, within EX28DRAFT_1770 at 1786.776 kb on - strand, within EX28DRAFT_1770 at 1786.826 kb on + strand, within EX28DRAFT_1770 at 1786.852 kb on - strand, within EX28DRAFT_1770 at 1786.969 kb on + strand, within EX28DRAFT_1770 at 1786.969 kb on + strand, within EX28DRAFT_1770 at 1786.969 kb on + strand, within EX28DRAFT_1770 at 1786.970 kb on - strand, within EX28DRAFT_1770 at 1786.973 kb on + strand, within EX28DRAFT_1770 at 1786.974 kb on - strand, within EX28DRAFT_1770 at 1786.982 kb on + strand, within EX28DRAFT_1770 at 1787.004 kb on + strand, within EX28DRAFT_1770 at 1787.004 kb on + strand, within EX28DRAFT_1770 at 1787.004 kb on + strand, within EX28DRAFT_1770 at 1787.005 kb on - strand, within EX28DRAFT_1770 at 1787.252 kb on - strand at 1787.255 kb on + strand at 1787.256 kb on - strand at 1787.259 kb on - strand at 1787.441 kb on - strand, within EX28DRAFT_1771 at 1787.922 kb on - strand, within EX28DRAFT_1772 at 1787.938 kb on - strand, within EX28DRAFT_1772 at 1787.994 kb on - strand, within EX28DRAFT_1772 at 1787.994 kb on - strand, within EX28DRAFT_1772 at 1788.052 kb on - strand at 1788.052 kb on - strand at 1788.052 kb on - strand at 1788.052 kb on - strand at 1788.052 kb on - strand at 1788.057 kb on + strand at 1788.057 kb on + strand at 1788.057 kb on + strand at 1788.057 kb on + strand at 1788.057 kb on + strand at 1788.058 kb on - strand at 1788.058 kb on - strand at 1788.058 kb on - strand at 1788.058 kb on - strand at 1788.058 kb on - strand at 1788.058 kb on - strand at 1788.135 kb on + strand at 1788.135 kb on + strand at 1788.154 kb on + strand at 1788.155 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,786,427 + EX28DRAFT_1770 0.34 -1.5 1,786,428 - EX28DRAFT_1770 0.34 -0.2 1,786,622 - EX28DRAFT_1770 0.49 -0.0 1,786,646 + EX28DRAFT_1770 0.51 -0.3 1,786,647 - EX28DRAFT_1770 0.51 +0.9 1,786,647 - EX28DRAFT_1770 0.51 -1.3 1,786,664 + EX28DRAFT_1770 0.53 -0.1 1,786,706 + EX28DRAFT_1770 0.56 +0.4 1,786,706 + EX28DRAFT_1770 0.56 -0.0 1,786,707 - EX28DRAFT_1770 0.56 -0.2 1,786,707 - EX28DRAFT_1770 0.56 +0.8 1,786,748 + EX28DRAFT_1770 0.59 +0.1 1,786,776 - EX28DRAFT_1770 0.62 +0.5 1,786,826 + EX28DRAFT_1770 0.66 -0.7 1,786,852 - EX28DRAFT_1770 0.68 -0.1 1,786,969 + EX28DRAFT_1770 0.77 -0.3 1,786,969 + EX28DRAFT_1770 0.77 -2.3 1,786,969 + EX28DRAFT_1770 0.77 +0.3 1,786,970 - EX28DRAFT_1770 0.77 +0.2 1,786,973 + EX28DRAFT_1770 0.77 -0.1 1,786,974 - EX28DRAFT_1770 0.77 +0.4 1,786,982 + EX28DRAFT_1770 0.78 -1.3 1,787,004 + EX28DRAFT_1770 0.80 -0.4 1,787,004 + EX28DRAFT_1770 0.80 -0.3 1,787,004 + EX28DRAFT_1770 0.80 -0.1 1,787,005 - EX28DRAFT_1770 0.80 +0.3 1,787,252 - -0.9 1,787,255 + +0.4 1,787,256 - -0.6 1,787,259 - -0.4 1,787,441 - EX28DRAFT_1771 0.44 -0.8 1,787,922 - EX28DRAFT_1772 0.69 -0.1 1,787,938 - EX28DRAFT_1772 0.72 +0.4 1,787,994 - EX28DRAFT_1772 0.86 +0.4 1,787,994 - EX28DRAFT_1772 0.86 +0.3 1,788,052 - +0.4 1,788,052 - +0.3 1,788,052 - +0.1 1,788,052 - +0.7 1,788,052 - +0.2 1,788,057 + +1.1 1,788,057 + +0.4 1,788,057 + -0.7 1,788,057 + +0.4 1,788,057 + +0.0 1,788,058 - +0.1 1,788,058 - -0.4 1,788,058 - -0.1 1,788,058 - +0.2 1,788,058 - -0.0 1,788,058 - +0.9 1,788,135 + -1.4 1,788,135 + -0.2 1,788,154 + +0.4 1,788,155 - -0.2
Or see this region's nucleotide sequence