Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1753 and EX28DRAFT_1754 are separated by 6 nucleotides EX28DRAFT_1754 and EX28DRAFT_1755 are separated by 6 nucleotides EX28DRAFT_1755 and EX28DRAFT_1756 overlap by 28 nucleotides
EX28DRAFT_1753: EX28DRAFT_1753 - exodeoxyribonuclease III, at 1,768,728 to 1,769,534
_1753
EX28DRAFT_1754: EX28DRAFT_1754 - Uncharacterized conserved protein, at 1,769,541 to 1,770,224
_1754
EX28DRAFT_1755: EX28DRAFT_1755 - ABC-type uncharacterized transport system, periplasmic component, at 1,770,231 to 1,771,400
_1755
EX28DRAFT_1756: EX28DRAFT_1756 - ABC-type uncharacterized transport system, permease component, at 1,771,373 to 1,772,902
_1756
Position (kb)
1770
1771
1772 Strain fitness (log2 ratio)
-1
0
1
2 at 1769.319 kb on - strand, within EX28DRAFT_1753 at 1769.533 kb on - strand at 1769.533 kb on - strand at 1769.564 kb on - strand at 1769.588 kb on + strand at 1769.588 kb on + strand at 1769.639 kb on + strand, within EX28DRAFT_1754 at 1769.640 kb on - strand, within EX28DRAFT_1754 at 1769.668 kb on - strand, within EX28DRAFT_1754 at 1769.715 kb on + strand, within EX28DRAFT_1754 at 1769.716 kb on - strand, within EX28DRAFT_1754 at 1769.716 kb on - strand, within EX28DRAFT_1754 at 1769.716 kb on - strand, within EX28DRAFT_1754 at 1770.022 kb on + strand, within EX28DRAFT_1754 at 1770.023 kb on - strand, within EX28DRAFT_1754 at 1770.023 kb on - strand, within EX28DRAFT_1754 at 1770.023 kb on - strand, within EX28DRAFT_1754 at 1770.024 kb on + strand, within EX28DRAFT_1754 at 1770.143 kb on - strand, within EX28DRAFT_1754 at 1770.152 kb on + strand, within EX28DRAFT_1754 at 1770.158 kb on - strand at 1770.158 kb on - strand at 1770.215 kb on + strand at 1770.230 kb on + strand at 1770.500 kb on + strand, within EX28DRAFT_1755 at 1770.810 kb on - strand, within EX28DRAFT_1755 at 1771.089 kb on + strand, within EX28DRAFT_1755 at 1771.090 kb on - strand, within EX28DRAFT_1755 at 1771.090 kb on - strand, within EX28DRAFT_1755 at 1771.433 kb on + strand at 1772.111 kb on - strand, within EX28DRAFT_1756
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,769,319 - EX28DRAFT_1753 0.73 -1.0 1,769,533 - -0.4 1,769,533 - -0.9 1,769,564 - -0.1 1,769,588 + -0.7 1,769,588 + +2.3 1,769,639 + EX28DRAFT_1754 0.14 +0.3 1,769,640 - EX28DRAFT_1754 0.14 -0.7 1,769,668 - EX28DRAFT_1754 0.19 -0.1 1,769,715 + EX28DRAFT_1754 0.25 +0.1 1,769,716 - EX28DRAFT_1754 0.26 -0.7 1,769,716 - EX28DRAFT_1754 0.26 +0.1 1,769,716 - EX28DRAFT_1754 0.26 +0.1 1,770,022 + EX28DRAFT_1754 0.70 -0.5 1,770,023 - EX28DRAFT_1754 0.70 -0.3 1,770,023 - EX28DRAFT_1754 0.70 +0.5 1,770,023 - EX28DRAFT_1754 0.70 +0.6 1,770,024 + EX28DRAFT_1754 0.71 +0.3 1,770,143 - EX28DRAFT_1754 0.88 +0.4 1,770,152 + EX28DRAFT_1754 0.89 -0.2 1,770,158 - +0.0 1,770,158 - -0.1 1,770,215 + -0.1 1,770,230 + -0.2 1,770,500 + EX28DRAFT_1755 0.23 +0.6 1,770,810 - EX28DRAFT_1755 0.49 -0.7 1,771,089 + EX28DRAFT_1755 0.73 +0.1 1,771,090 - EX28DRAFT_1755 0.73 -0.5 1,771,090 - EX28DRAFT_1755 0.73 -0.9 1,771,433 + -0.1 1,772,111 - EX28DRAFT_1756 0.48 -0.3
Or see this region's nucleotide sequence