Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1368 and EX28DRAFT_1369 overlap by 4 nucleotides EX28DRAFT_1369 and EX28DRAFT_1370 overlap by 4 nucleotides EX28DRAFT_1370 and EX28DRAFT_1371 overlap by 4 nucleotides EX28DRAFT_1371 and EX28DRAFT_1372 overlap by 4 nucleotides EX28DRAFT_1372 and EX28DRAFT_1373 are separated by 1 nucleotides
EX28DRAFT_1368: EX28DRAFT_1368 - Protein of unknown function (DUF3833), at 1,385,131 to 1,385,664
_1368
EX28DRAFT_1369: EX28DRAFT_1369 - hypothetical protein, at 1,385,661 to 1,386,182
_1369
EX28DRAFT_1370: EX28DRAFT_1370 - Protein of unknown function (DUF2878), at 1,386,179 to 1,386,664
_1370
EX28DRAFT_1371: EX28DRAFT_1371 - Cyclopropane fatty acid synthase and related methyltransferases, at 1,386,661 to 1,387,881
_1371
EX28DRAFT_1372: EX28DRAFT_1372 - Uncharacterized conserved protein, at 1,387,878 to 1,388,600
_1372
EX28DRAFT_1373: EX28DRAFT_1373 - Predicted NAD/FAD-binding protein, at 1,388,602 to 1,389,861
_1373
Position (kb)
1386
1387
1388 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1385.778 kb on - strand, within EX28DRAFT_1369 at 1385.992 kb on + strand, within EX28DRAFT_1369 at 1385.992 kb on + strand, within EX28DRAFT_1369 at 1385.993 kb on - strand, within EX28DRAFT_1369 at 1385.997 kb on - strand, within EX28DRAFT_1369 at 1385.997 kb on - strand, within EX28DRAFT_1369 at 1386.000 kb on - strand, within EX28DRAFT_1369 at 1386.000 kb on - strand, within EX28DRAFT_1369 at 1386.048 kb on + strand, within EX28DRAFT_1369 at 1386.059 kb on + strand, within EX28DRAFT_1369 at 1386.059 kb on + strand, within EX28DRAFT_1369 at 1386.059 kb on + strand, within EX28DRAFT_1369 at 1386.060 kb on - strand, within EX28DRAFT_1369 at 1386.061 kb on + strand, within EX28DRAFT_1369 at 1386.062 kb on - strand, within EX28DRAFT_1369 at 1386.152 kb on + strand at 1386.306 kb on + strand, within EX28DRAFT_1370 at 1386.616 kb on - strand at 1386.616 kb on - strand at 1386.734 kb on + strand at 1386.941 kb on + strand, within EX28DRAFT_1371 at 1387.140 kb on - strand, within EX28DRAFT_1371 at 1387.206 kb on + strand, within EX28DRAFT_1371 at 1387.206 kb on + strand, within EX28DRAFT_1371 at 1387.206 kb on + strand, within EX28DRAFT_1371 at 1387.206 kb on + strand, within EX28DRAFT_1371 at 1387.207 kb on - strand, within EX28DRAFT_1371 at 1387.207 kb on - strand, within EX28DRAFT_1371 at 1387.207 kb on - strand, within EX28DRAFT_1371 at 1387.207 kb on - strand, within EX28DRAFT_1371 at 1387.208 kb on + strand, within EX28DRAFT_1371 at 1387.208 kb on + strand, within EX28DRAFT_1371 at 1387.209 kb on - strand, within EX28DRAFT_1371 at 1387.209 kb on - strand, within EX28DRAFT_1371 at 1387.265 kb on + strand, within EX28DRAFT_1371 at 1387.321 kb on + strand, within EX28DRAFT_1371 at 1387.439 kb on + strand, within EX28DRAFT_1371 at 1387.439 kb on + strand, within EX28DRAFT_1371 at 1387.439 kb on + strand, within EX28DRAFT_1371 at 1387.439 kb on + strand, within EX28DRAFT_1371 at 1387.460 kb on + strand, within EX28DRAFT_1371 at 1387.859 kb on - strand at 1387.911 kb on - strand at 1387.912 kb on + strand at 1387.913 kb on - strand at 1387.913 kb on - strand at 1387.954 kb on + strand, within EX28DRAFT_1372 at 1387.954 kb on + strand, within EX28DRAFT_1372 at 1387.954 kb on + strand, within EX28DRAFT_1372 at 1387.955 kb on - strand, within EX28DRAFT_1372 at 1388.093 kb on + strand, within EX28DRAFT_1372 at 1388.132 kb on - strand, within EX28DRAFT_1372 at 1388.209 kb on + strand, within EX28DRAFT_1372 at 1388.213 kb on - strand, within EX28DRAFT_1372 at 1388.213 kb on - strand, within EX28DRAFT_1372 at 1388.290 kb on + strand, within EX28DRAFT_1372 at 1388.291 kb on - strand, within EX28DRAFT_1372 at 1388.324 kb on - strand, within EX28DRAFT_1372 at 1388.520 kb on - strand, within EX28DRAFT_1372 at 1388.520 kb on - strand, within EX28DRAFT_1372 at 1388.530 kb on + strand at 1388.530 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,385,778 - EX28DRAFT_1369 0.22 -0.8 1,385,992 + EX28DRAFT_1369 0.63 +0.6 1,385,992 + EX28DRAFT_1369 0.63 +0.8 1,385,993 - EX28DRAFT_1369 0.64 -0.1 1,385,997 - EX28DRAFT_1369 0.64 -0.3 1,385,997 - EX28DRAFT_1369 0.64 -0.2 1,386,000 - EX28DRAFT_1369 0.65 +0.2 1,386,000 - EX28DRAFT_1369 0.65 -1.3 1,386,048 + EX28DRAFT_1369 0.74 +0.2 1,386,059 + EX28DRAFT_1369 0.76 -1.6 1,386,059 + EX28DRAFT_1369 0.76 -0.1 1,386,059 + EX28DRAFT_1369 0.76 -2.2 1,386,060 - EX28DRAFT_1369 0.76 +0.3 1,386,061 + EX28DRAFT_1369 0.77 +0.9 1,386,062 - EX28DRAFT_1369 0.77 -0.5 1,386,152 + +0.1 1,386,306 + EX28DRAFT_1370 0.26 +1.3 1,386,616 - +1.0 1,386,616 - +0.1 1,386,734 + -0.4 1,386,941 + EX28DRAFT_1371 0.23 -0.2 1,387,140 - EX28DRAFT_1371 0.39 -0.2 1,387,206 + EX28DRAFT_1371 0.45 +0.2 1,387,206 + EX28DRAFT_1371 0.45 -0.5 1,387,206 + EX28DRAFT_1371 0.45 -0.7 1,387,206 + EX28DRAFT_1371 0.45 +0.5 1,387,207 - EX28DRAFT_1371 0.45 -0.3 1,387,207 - EX28DRAFT_1371 0.45 +2.1 1,387,207 - EX28DRAFT_1371 0.45 +0.0 1,387,207 - EX28DRAFT_1371 0.45 +0.4 1,387,208 + EX28DRAFT_1371 0.45 -0.3 1,387,208 + EX28DRAFT_1371 0.45 -1.0 1,387,209 - EX28DRAFT_1371 0.45 +0.2 1,387,209 - EX28DRAFT_1371 0.45 +0.7 1,387,265 + EX28DRAFT_1371 0.49 -0.5 1,387,321 + EX28DRAFT_1371 0.54 -0.2 1,387,439 + EX28DRAFT_1371 0.64 +0.1 1,387,439 + EX28DRAFT_1371 0.64 +0.2 1,387,439 + EX28DRAFT_1371 0.64 -0.2 1,387,439 + EX28DRAFT_1371 0.64 -0.2 1,387,460 + EX28DRAFT_1371 0.65 -0.2 1,387,859 - -0.3 1,387,911 - +0.8 1,387,912 + +0.1 1,387,913 - +0.4 1,387,913 - -0.7 1,387,954 + EX28DRAFT_1372 0.11 +0.4 1,387,954 + EX28DRAFT_1372 0.11 -0.2 1,387,954 + EX28DRAFT_1372 0.11 +0.3 1,387,955 - EX28DRAFT_1372 0.11 +0.4 1,388,093 + EX28DRAFT_1372 0.30 +0.6 1,388,132 - EX28DRAFT_1372 0.35 +0.9 1,388,209 + EX28DRAFT_1372 0.46 +0.6 1,388,213 - EX28DRAFT_1372 0.46 +0.3 1,388,213 - EX28DRAFT_1372 0.46 +0.5 1,388,290 + EX28DRAFT_1372 0.57 +0.1 1,388,291 - EX28DRAFT_1372 0.57 -0.5 1,388,324 - EX28DRAFT_1372 0.62 -0.3 1,388,520 - EX28DRAFT_1372 0.89 -0.2 1,388,520 - EX28DRAFT_1372 0.89 +0.3 1,388,530 + -1.5 1,388,530 + -1.6
Or see this region's nucleotide sequence