Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1265 and EX28DRAFT_1266 are separated by 169 nucleotides EX28DRAFT_1266 and EX28DRAFT_1267 are separated by 136 nucleotides EX28DRAFT_1267 and EX28DRAFT_1268 overlap by 4 nucleotides
EX28DRAFT_1265: EX28DRAFT_1265 - ORF6N domain, at 1,282,247 to 1,282,936
_1265
EX28DRAFT_1266: EX28DRAFT_1266 - hypothetical protein, at 1,283,106 to 1,283,414
_1266
EX28DRAFT_1267: EX28DRAFT_1267 - Predicted acyltransferases, at 1,283,551 to 1,284,624
_1267
EX28DRAFT_1268: EX28DRAFT_1268 - Lysophospholipase L1 and related esterases, at 1,284,621 to 1,285,736
_1268
Position (kb)
1283
1284
1285 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1282.623 kb on + strand, within EX28DRAFT_1265 at 1282.624 kb on - strand, within EX28DRAFT_1265 at 1282.624 kb on - strand, within EX28DRAFT_1265 at 1282.627 kb on + strand, within EX28DRAFT_1265 at 1282.627 kb on + strand, within EX28DRAFT_1265 at 1282.628 kb on - strand, within EX28DRAFT_1265 at 1282.717 kb on + strand, within EX28DRAFT_1265 at 1282.717 kb on + strand, within EX28DRAFT_1265 at 1282.718 kb on - strand, within EX28DRAFT_1265 at 1282.793 kb on - strand, within EX28DRAFT_1265 at 1282.959 kb on + strand at 1283.011 kb on - strand at 1283.021 kb on - strand at 1283.076 kb on - strand at 1283.148 kb on - strand, within EX28DRAFT_1266 at 1283.148 kb on - strand, within EX28DRAFT_1266 at 1283.148 kb on - strand, within EX28DRAFT_1266 at 1283.148 kb on - strand, within EX28DRAFT_1266 at 1283.239 kb on + strand, within EX28DRAFT_1266 at 1283.320 kb on + strand, within EX28DRAFT_1266 at 1283.321 kb on - strand, within EX28DRAFT_1266 at 1283.452 kb on + strand at 1283.464 kb on + strand at 1283.468 kb on + strand at 1283.469 kb on - strand at 1283.509 kb on + strand at 1283.509 kb on + strand at 1283.509 kb on + strand at 1283.510 kb on - strand at 1283.572 kb on + strand at 1283.605 kb on + strand at 1283.606 kb on - strand at 1283.648 kb on + strand at 1283.701 kb on - strand, within EX28DRAFT_1267 at 1283.710 kb on + strand, within EX28DRAFT_1267 at 1283.731 kb on + strand, within EX28DRAFT_1267 at 1283.731 kb on + strand, within EX28DRAFT_1267 at 1283.732 kb on - strand, within EX28DRAFT_1267 at 1283.733 kb on + strand, within EX28DRAFT_1267 at 1283.742 kb on + strand, within EX28DRAFT_1267 at 1283.742 kb on + strand, within EX28DRAFT_1267 at 1283.806 kb on + strand, within EX28DRAFT_1267 at 1283.806 kb on + strand, within EX28DRAFT_1267 at 1283.806 kb on + strand, within EX28DRAFT_1267 at 1283.807 kb on - strand, within EX28DRAFT_1267 at 1283.807 kb on - strand, within EX28DRAFT_1267 at 1283.807 kb on - strand, within EX28DRAFT_1267 at 1283.838 kb on - strand, within EX28DRAFT_1267 at 1283.838 kb on - strand, within EX28DRAFT_1267 at 1283.862 kb on + strand, within EX28DRAFT_1267 at 1283.862 kb on + strand, within EX28DRAFT_1267 at 1283.863 kb on - strand, within EX28DRAFT_1267 at 1283.863 kb on - strand, within EX28DRAFT_1267 at 1283.863 kb on - strand, within EX28DRAFT_1267 at 1283.891 kb on - strand, within EX28DRAFT_1267 at 1283.891 kb on - strand, within EX28DRAFT_1267 at 1283.891 kb on - strand, within EX28DRAFT_1267 at 1284.129 kb on + strand, within EX28DRAFT_1267 at 1284.184 kb on + strand, within EX28DRAFT_1267 at 1284.184 kb on + strand, within EX28DRAFT_1267 at 1284.184 kb on + strand, within EX28DRAFT_1267 at 1284.184 kb on + strand, within EX28DRAFT_1267 at 1284.185 kb on - strand, within EX28DRAFT_1267 at 1284.244 kb on - strand, within EX28DRAFT_1267 at 1284.246 kb on - strand, within EX28DRAFT_1267 at 1284.295 kb on + strand, within EX28DRAFT_1267 at 1284.296 kb on - strand, within EX28DRAFT_1267 at 1284.318 kb on + strand, within EX28DRAFT_1267 at 1284.376 kb on - strand, within EX28DRAFT_1267 at 1284.511 kb on + strand, within EX28DRAFT_1267 at 1284.512 kb on - strand, within EX28DRAFT_1267 at 1284.516 kb on + strand, within EX28DRAFT_1267 at 1284.631 kb on + strand at 1284.637 kb on + strand at 1284.638 kb on - strand at 1284.802 kb on - strand, within EX28DRAFT_1268 at 1285.313 kb on + strand, within EX28DRAFT_1268 at 1285.454 kb on + strand, within EX28DRAFT_1268 at 1285.472 kb on - strand, within EX28DRAFT_1268 at 1285.596 kb on - strand, within EX28DRAFT_1268
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,282,623 + EX28DRAFT_1265 0.54 +0.5 1,282,624 - EX28DRAFT_1265 0.55 -1.7 1,282,624 - EX28DRAFT_1265 0.55 -0.2 1,282,627 + EX28DRAFT_1265 0.55 +0.6 1,282,627 + EX28DRAFT_1265 0.55 +0.3 1,282,628 - EX28DRAFT_1265 0.55 +0.6 1,282,717 + EX28DRAFT_1265 0.68 +0.3 1,282,717 + EX28DRAFT_1265 0.68 -0.8 1,282,718 - EX28DRAFT_1265 0.68 +0.4 1,282,793 - EX28DRAFT_1265 0.79 +0.6 1,282,959 + -0.3 1,283,011 - +0.4 1,283,021 - +0.3 1,283,076 - -0.3 1,283,148 - EX28DRAFT_1266 0.14 -0.2 1,283,148 - EX28DRAFT_1266 0.14 +0.8 1,283,148 - EX28DRAFT_1266 0.14 -0.6 1,283,148 - EX28DRAFT_1266 0.14 -0.2 1,283,239 + EX28DRAFT_1266 0.43 +0.0 1,283,320 + EX28DRAFT_1266 0.69 -0.4 1,283,321 - EX28DRAFT_1266 0.70 -1.0 1,283,452 + +0.1 1,283,464 + +0.1 1,283,468 + +0.4 1,283,469 - +1.1 1,283,509 + -0.9 1,283,509 + -0.3 1,283,509 + +0.5 1,283,510 - -0.2 1,283,572 + +1.3 1,283,605 + -0.3 1,283,606 - -1.4 1,283,648 + -0.6 1,283,701 - EX28DRAFT_1267 0.14 +0.4 1,283,710 + EX28DRAFT_1267 0.15 -0.2 1,283,731 + EX28DRAFT_1267 0.17 +1.8 1,283,731 + EX28DRAFT_1267 0.17 -0.5 1,283,732 - EX28DRAFT_1267 0.17 -2.0 1,283,733 + EX28DRAFT_1267 0.17 +0.1 1,283,742 + EX28DRAFT_1267 0.18 -1.7 1,283,742 + EX28DRAFT_1267 0.18 +1.3 1,283,806 + EX28DRAFT_1267 0.24 -0.3 1,283,806 + EX28DRAFT_1267 0.24 -0.3 1,283,806 + EX28DRAFT_1267 0.24 -1.0 1,283,807 - EX28DRAFT_1267 0.24 +0.3 1,283,807 - EX28DRAFT_1267 0.24 -0.5 1,283,807 - EX28DRAFT_1267 0.24 -0.3 1,283,838 - EX28DRAFT_1267 0.27 -1.7 1,283,838 - EX28DRAFT_1267 0.27 -0.5 1,283,862 + EX28DRAFT_1267 0.29 -1.2 1,283,862 + EX28DRAFT_1267 0.29 +0.1 1,283,863 - EX28DRAFT_1267 0.29 +1.0 1,283,863 - EX28DRAFT_1267 0.29 -0.4 1,283,863 - EX28DRAFT_1267 0.29 -1.0 1,283,891 - EX28DRAFT_1267 0.32 +1.5 1,283,891 - EX28DRAFT_1267 0.32 -1.4 1,283,891 - EX28DRAFT_1267 0.32 -0.4 1,284,129 + EX28DRAFT_1267 0.54 -0.8 1,284,184 + EX28DRAFT_1267 0.59 +0.0 1,284,184 + EX28DRAFT_1267 0.59 +1.9 1,284,184 + EX28DRAFT_1267 0.59 -0.0 1,284,184 + EX28DRAFT_1267 0.59 +0.0 1,284,185 - EX28DRAFT_1267 0.59 -0.5 1,284,244 - EX28DRAFT_1267 0.65 -0.8 1,284,246 - EX28DRAFT_1267 0.65 -0.7 1,284,295 + EX28DRAFT_1267 0.69 +0.2 1,284,296 - EX28DRAFT_1267 0.69 -0.3 1,284,318 + EX28DRAFT_1267 0.71 -0.6 1,284,376 - EX28DRAFT_1267 0.77 +0.2 1,284,511 + EX28DRAFT_1267 0.89 -0.3 1,284,512 - EX28DRAFT_1267 0.89 +0.7 1,284,516 + EX28DRAFT_1267 0.90 -1.2 1,284,631 + -0.6 1,284,637 + +2.0 1,284,638 - -2.4 1,284,802 - EX28DRAFT_1268 0.16 +0.2 1,285,313 + EX28DRAFT_1268 0.62 -2.6 1,285,454 + EX28DRAFT_1268 0.75 +1.7 1,285,472 - EX28DRAFT_1268 0.76 +0.2 1,285,596 - EX28DRAFT_1268 0.87 -0.0
Or see this region's nucleotide sequence