Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0943 and EX28DRAFT_0944 are separated by 34 nucleotides EX28DRAFT_0944 and EX28DRAFT_0945 are separated by 399 nucleotides
EX28DRAFT_0943: EX28DRAFT_0943 - Periplasmic serine proteases (ClpP class), at 941,599 to 942,645
_0943
EX28DRAFT_0944: EX28DRAFT_0944 - Protein of unknown function (DUF2498), at 942,680 to 942,931
_0944
EX28DRAFT_0945: EX28DRAFT_0945 - DNA topoisomerase I, bacterial, at 943,331 to 945,928
_0945
Position (kb) 942
943 Strain fitness (log2 ratio) -2
-1
0
1
2 at 941.747 kb on - strand, within EX28DRAFT_0943 at 941.748 kb on + strand, within EX28DRAFT_0943 at 941.749 kb on - strand, within EX28DRAFT_0943 at 941.749 kb on - strand, within EX28DRAFT_0943 at 941.787 kb on + strand, within EX28DRAFT_0943 at 942.136 kb on + strand, within EX28DRAFT_0943 at 942.136 kb on + strand, within EX28DRAFT_0943 at 942.137 kb on - strand, within EX28DRAFT_0943 at 942.280 kb on + strand, within EX28DRAFT_0943 at 942.387 kb on + strand, within EX28DRAFT_0943 at 942.506 kb on + strand, within EX28DRAFT_0943 at 942.662 kb on + strand at 942.662 kb on + strand at 942.724 kb on - strand, within EX28DRAFT_0944 at 942.787 kb on - strand, within EX28DRAFT_0944 at 942.787 kb on - strand, within EX28DRAFT_0944 at 942.815 kb on - strand, within EX28DRAFT_0944 at 942.815 kb on - strand, within EX28DRAFT_0944 at 942.854 kb on - strand, within EX28DRAFT_0944 at 942.910 kb on + strand at 942.911 kb on - strand at 942.923 kb on - strand at 942.956 kb on + strand at 942.956 kb on + strand at 942.956 kb on + strand at 942.956 kb on + strand at 942.957 kb on - strand at 942.957 kb on - strand at 942.957 kb on - strand at 942.997 kb on - strand at 943.052 kb on - strand at 943.074 kb on + strand at 943.082 kb on - strand at 943.231 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 941,747 - EX28DRAFT_0943 0.14 -0.1 941,748 + EX28DRAFT_0943 0.14 +0.4 941,749 - EX28DRAFT_0943 0.14 -1.0 941,749 - EX28DRAFT_0943 0.14 +2.5 941,787 + EX28DRAFT_0943 0.18 -0.9 942,136 + EX28DRAFT_0943 0.51 +1.0 942,136 + EX28DRAFT_0943 0.51 -0.4 942,137 - EX28DRAFT_0943 0.51 -1.8 942,280 + EX28DRAFT_0943 0.65 +0.1 942,387 + EX28DRAFT_0943 0.75 -0.3 942,506 + EX28DRAFT_0943 0.87 -0.1 942,662 + +0.6 942,662 + +0.1 942,724 - EX28DRAFT_0944 0.17 +1.1 942,787 - EX28DRAFT_0944 0.42 +0.2 942,787 - EX28DRAFT_0944 0.42 +0.5 942,815 - EX28DRAFT_0944 0.54 +0.6 942,815 - EX28DRAFT_0944 0.54 +2.0 942,854 - EX28DRAFT_0944 0.69 +0.2 942,910 + +0.0 942,911 - -0.3 942,923 - +1.2 942,956 + -0.1 942,956 + +0.6 942,956 + -0.3 942,956 + +0.1 942,957 - +1.6 942,957 - -0.6 942,957 - +0.6 942,997 - +0.6 943,052 - +0.4 943,074 + -0.3 943,082 - -1.5 943,231 + +0.6
Or see this region's nucleotide sequence