Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0759 and EX28DRAFT_0760 are separated by 47 nucleotides EX28DRAFT_0760 and EX28DRAFT_0761 are separated by 93 nucleotides EX28DRAFT_0761 and EX28DRAFT_0762 are separated by 123 nucleotides EX28DRAFT_0762 and EX28DRAFT_0763 are separated by 143 nucleotides
EX28DRAFT_0759: EX28DRAFT_0759 - Uncharacterized protein conserved in bacteria, at 755,896 to 756,171
_0759
EX28DRAFT_0760: EX28DRAFT_0760 - 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway), at 756,219 to 756,878
_0760
EX28DRAFT_0761: EX28DRAFT_0761 - Uncharacterized conserved protein, at 756,972 to 757,412
_0761
EX28DRAFT_0762: EX28DRAFT_0762 - Disulfide bond formation protein DsbB, at 757,536 to 758,066
_0762
EX28DRAFT_0763: EX28DRAFT_0763 - Na+/H+ antiporter NhaB, at 758,210 to 759,748
_0763
Position (kb) 756
757
758 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 755.988 kb on - strand, within EX28DRAFT_0759 at 756.042 kb on + strand, within EX28DRAFT_0759 at 756.043 kb on - strand, within EX28DRAFT_0759 at 756.100 kb on + strand, within EX28DRAFT_0759 at 756.100 kb on + strand, within EX28DRAFT_0759 at 756.103 kb on + strand, within EX28DRAFT_0759 at 756.107 kb on + strand, within EX28DRAFT_0759 at 756.189 kb on + strand at 756.223 kb on - strand at 756.233 kb on + strand at 756.234 kb on - strand at 756.234 kb on - strand at 756.295 kb on - strand, within EX28DRAFT_0760 at 756.354 kb on - strand, within EX28DRAFT_0760 at 756.354 kb on - strand, within EX28DRAFT_0760 at 756.354 kb on - strand, within EX28DRAFT_0760 at 756.720 kb on - strand, within EX28DRAFT_0760 at 756.741 kb on + strand, within EX28DRAFT_0760 at 756.764 kb on + strand, within EX28DRAFT_0760 at 756.765 kb on - strand, within EX28DRAFT_0760 at 756.833 kb on - strand at 757.129 kb on + strand, within EX28DRAFT_0761 at 757.130 kb on - strand, within EX28DRAFT_0761 at 757.158 kb on + strand, within EX28DRAFT_0761 at 757.158 kb on + strand, within EX28DRAFT_0761 at 757.238 kb on + strand, within EX28DRAFT_0761 at 757.238 kb on + strand, within EX28DRAFT_0761 at 757.248 kb on + strand, within EX28DRAFT_0761 at 757.331 kb on + strand, within EX28DRAFT_0761 at 757.331 kb on + strand, within EX28DRAFT_0761 at 757.537 kb on + strand at 757.935 kb on - strand, within EX28DRAFT_0762 at 758.067 kb on - strand at 758.089 kb on + strand at 758.089 kb on + strand at 758.090 kb on - strand at 758.144 kb on - strand at 758.150 kb on + strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.225 kb on + strand at 758.225 kb on + strand at 758.225 kb on + strand at 758.227 kb on + strand at 758.228 kb on - strand at 758.238 kb on - strand at 758.266 kb on + strand at 758.308 kb on + strand at 758.308 kb on + strand at 758.310 kb on + strand at 758.351 kb on + strand at 758.352 kb on - strand at 758.352 kb on - strand at 758.352 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 755,988 - EX28DRAFT_0759 0.33 -1.1 756,042 + EX28DRAFT_0759 0.53 +1.1 756,043 - EX28DRAFT_0759 0.53 -1.5 756,100 + EX28DRAFT_0759 0.74 -1.8 756,100 + EX28DRAFT_0759 0.74 -1.0 756,103 + EX28DRAFT_0759 0.75 -2.5 756,107 + EX28DRAFT_0759 0.76 -0.5 756,189 + -0.1 756,223 - -0.3 756,233 + +0.1 756,234 - -0.1 756,234 - +0.2 756,295 - EX28DRAFT_0760 0.12 -0.4 756,354 - EX28DRAFT_0760 0.20 -0.2 756,354 - EX28DRAFT_0760 0.20 -0.2 756,354 - EX28DRAFT_0760 0.20 +1.1 756,720 - EX28DRAFT_0760 0.76 +0.2 756,741 + EX28DRAFT_0760 0.79 +0.1 756,764 + EX28DRAFT_0760 0.83 +0.1 756,765 - EX28DRAFT_0760 0.83 +0.0 756,833 - -1.5 757,129 + EX28DRAFT_0761 0.36 -0.1 757,130 - EX28DRAFT_0761 0.36 +1.0 757,158 + EX28DRAFT_0761 0.42 +0.3 757,158 + EX28DRAFT_0761 0.42 +0.7 757,238 + EX28DRAFT_0761 0.60 +0.6 757,238 + EX28DRAFT_0761 0.60 +0.7 757,248 + EX28DRAFT_0761 0.63 -0.4 757,331 + EX28DRAFT_0761 0.81 +0.4 757,331 + EX28DRAFT_0761 0.81 +0.7 757,537 + +0.4 757,935 - EX28DRAFT_0762 0.75 -1.7 758,067 - -0.9 758,089 + -3.8 758,089 + +2.7 758,090 - +0.0 758,144 - -0.4 758,150 + -1.6 758,207 - -0.0 758,207 - -0.5 758,207 - -0.8 758,207 - +0.5 758,207 - +0.1 758,207 - -0.6 758,207 - -0.3 758,207 - +0.5 758,207 - -1.6 758,225 + -0.1 758,225 + +0.6 758,225 + -0.1 758,227 + -0.1 758,228 - +0.4 758,238 - +0.5 758,266 + +0.1 758,308 + -0.1 758,308 + -1.1 758,310 + +0.3 758,351 + -0.7 758,352 - -0.6 758,352 - -0.4 758,352 - +0.4
Or see this region's nucleotide sequence