Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0508 and EX28DRAFT_0509 are separated by 1 nucleotides EX28DRAFT_0509 and EX28DRAFT_0510 are separated by 17 nucleotides
EX28DRAFT_0508: EX28DRAFT_0508 - Undecaprenyl-phosphate glucose phosphotransferase, at 500,264 to 501,658
_0508
EX28DRAFT_0509: EX28DRAFT_0509 - Membrane protein involved in the export of O-antigen and teichoic acid, at 501,660 to 503,138
_0509
EX28DRAFT_0510: EX28DRAFT_0510 - colanic acid biosynthesis pyruvyl transferase WcaK, at 503,156 to 504,436
_0510
Position (kb) 501
502
503
504 Strain fitness (log2 ratio) -2
-1
0
1 at 500.688 kb on - strand, within EX28DRAFT_0508 at 500.792 kb on + strand, within EX28DRAFT_0508 at 500.840 kb on + strand, within EX28DRAFT_0508 at 500.851 kb on + strand, within EX28DRAFT_0508 at 500.851 kb on + strand, within EX28DRAFT_0508 at 500.852 kb on - strand, within EX28DRAFT_0508 at 500.888 kb on + strand, within EX28DRAFT_0508 at 500.889 kb on - strand, within EX28DRAFT_0508 at 500.923 kb on + strand, within EX28DRAFT_0508 at 500.986 kb on + strand, within EX28DRAFT_0508 at 501.097 kb on + strand, within EX28DRAFT_0508 at 501.098 kb on - strand, within EX28DRAFT_0508 at 501.098 kb on - strand, within EX28DRAFT_0508 at 501.455 kb on + strand, within EX28DRAFT_0508 at 501.455 kb on + strand, within EX28DRAFT_0508 at 501.456 kb on - strand, within EX28DRAFT_0508 at 501.573 kb on - strand at 501.573 kb on - strand at 501.590 kb on - strand at 501.656 kb on + strand at 501.656 kb on + strand at 501.656 kb on + strand at 501.656 kb on + strand at 501.667 kb on + strand at 501.667 kb on + strand at 501.668 kb on - strand at 501.668 kb on - strand at 502.329 kb on + strand, within EX28DRAFT_0509 at 502.329 kb on + strand, within EX28DRAFT_0509 at 502.329 kb on + strand, within EX28DRAFT_0509 at 502.330 kb on - strand, within EX28DRAFT_0509 at 502.330 kb on - strand, within EX28DRAFT_0509 at 502.408 kb on - strand, within EX28DRAFT_0509 at 502.408 kb on - strand, within EX28DRAFT_0509 at 502.855 kb on - strand, within EX28DRAFT_0509 at 502.899 kb on + strand, within EX28DRAFT_0509 at 502.900 kb on - strand, within EX28DRAFT_0509 at 503.137 kb on - strand at 503.140 kb on + strand at 503.167 kb on - strand at 503.182 kb on + strand at 503.182 kb on + strand at 503.183 kb on - strand at 503.183 kb on - strand at 503.224 kb on - strand at 503.224 kb on - strand at 503.237 kb on - strand at 503.507 kb on + strand, within EX28DRAFT_0510 at 503.585 kb on - strand, within EX28DRAFT_0510 at 503.669 kb on + strand, within EX28DRAFT_0510 at 503.819 kb on + strand, within EX28DRAFT_0510 at 503.928 kb on - strand, within EX28DRAFT_0510 at 504.018 kb on - strand, within EX28DRAFT_0510 at 504.018 kb on - strand, within EX28DRAFT_0510 at 504.018 kb on - strand, within EX28DRAFT_0510 at 504.080 kb on + strand, within EX28DRAFT_0510
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 500,688 - EX28DRAFT_0508 0.30 +1.6 500,792 + EX28DRAFT_0508 0.38 +0.1 500,840 + EX28DRAFT_0508 0.41 -0.2 500,851 + EX28DRAFT_0508 0.42 +0.4 500,851 + EX28DRAFT_0508 0.42 +0.4 500,852 - EX28DRAFT_0508 0.42 -0.7 500,888 + EX28DRAFT_0508 0.45 +0.1 500,889 - EX28DRAFT_0508 0.45 +1.6 500,923 + EX28DRAFT_0508 0.47 -0.5 500,986 + EX28DRAFT_0508 0.52 -1.0 501,097 + EX28DRAFT_0508 0.60 -1.0 501,098 - EX28DRAFT_0508 0.60 -0.1 501,098 - EX28DRAFT_0508 0.60 -0.5 501,455 + EX28DRAFT_0508 0.85 +0.1 501,455 + EX28DRAFT_0508 0.85 -0.2 501,456 - EX28DRAFT_0508 0.85 +0.8 501,573 - -0.1 501,573 - -0.6 501,590 - -0.4 501,656 + -0.2 501,656 + +1.1 501,656 + +0.5 501,656 + +0.4 501,667 + +0.5 501,667 + +0.3 501,668 - -0.0 501,668 - -0.7 502,329 + EX28DRAFT_0509 0.45 -1.2 502,329 + EX28DRAFT_0509 0.45 +0.5 502,329 + EX28DRAFT_0509 0.45 +0.0 502,330 - EX28DRAFT_0509 0.45 -0.3 502,330 - EX28DRAFT_0509 0.45 -0.5 502,408 - EX28DRAFT_0509 0.51 -0.1 502,408 - EX28DRAFT_0509 0.51 -0.2 502,855 - EX28DRAFT_0509 0.81 -0.1 502,899 + EX28DRAFT_0509 0.84 -0.1 502,900 - EX28DRAFT_0509 0.84 +0.5 503,137 - -0.7 503,140 + -0.3 503,167 - -2.5 503,182 + +0.1 503,182 + -0.3 503,183 - -0.9 503,183 - -0.5 503,224 - -0.1 503,224 - -1.9 503,237 - -0.1 503,507 + EX28DRAFT_0510 0.27 +0.1 503,585 - EX28DRAFT_0510 0.33 -0.4 503,669 + EX28DRAFT_0510 0.40 +0.0 503,819 + EX28DRAFT_0510 0.52 +0.0 503,928 - EX28DRAFT_0510 0.60 -1.5 504,018 - EX28DRAFT_0510 0.67 +0.4 504,018 - EX28DRAFT_0510 0.67 +0.1 504,018 - EX28DRAFT_0510 0.67 +0.2 504,080 + EX28DRAFT_0510 0.72 -0.0
Or see this region's nucleotide sequence