Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0401 and EX28DRAFT_0402 are separated by 111 nucleotides EX28DRAFT_0402 and EX28DRAFT_0403 are separated by 138 nucleotides
EX28DRAFT_0401: EX28DRAFT_0401 - Outer membrane receptor for ferrienterochelin and colicins, at 376,759 to 378,729
_0401
EX28DRAFT_0402: EX28DRAFT_0402 - S-formylglutathione hydrolase, at 378,841 to 379,668
_0402
EX28DRAFT_0403: EX28DRAFT_0403 - Protein of unknown function (DUF1228), at 379,807 to 380,955
_0403
Position (kb) 378
379
380 Strain fitness (log2 ratio) -1
0
1
2
3 at 377.918 kb on + strand, within EX28DRAFT_0401 at 377.919 kb on + strand, within EX28DRAFT_0401 at 377.919 kb on + strand, within EX28DRAFT_0401 at 377.920 kb on - strand, within EX28DRAFT_0401 at 377.960 kb on - strand, within EX28DRAFT_0401 at 378.133 kb on + strand, within EX28DRAFT_0401 at 378.195 kb on + strand, within EX28DRAFT_0401 at 378.259 kb on - strand, within EX28DRAFT_0401 at 378.262 kb on + strand, within EX28DRAFT_0401 at 378.262 kb on + strand, within EX28DRAFT_0401 at 378.263 kb on - strand, within EX28DRAFT_0401 at 378.263 kb on - strand, within EX28DRAFT_0401 at 378.292 kb on - strand, within EX28DRAFT_0401 at 378.304 kb on + strand, within EX28DRAFT_0401 at 378.304 kb on + strand, within EX28DRAFT_0401 at 378.304 kb on + strand, within EX28DRAFT_0401 at 378.304 kb on + strand, within EX28DRAFT_0401 at 378.388 kb on + strand, within EX28DRAFT_0401 at 378.394 kb on + strand, within EX28DRAFT_0401 at 378.395 kb on - strand, within EX28DRAFT_0401 at 378.506 kb on - strand, within EX28DRAFT_0401 at 378.520 kb on + strand, within EX28DRAFT_0401 at 378.521 kb on - strand, within EX28DRAFT_0401 at 378.606 kb on - strand at 378.673 kb on + strand at 378.679 kb on + strand at 378.719 kb on - strand at 378.720 kb on + strand at 378.720 kb on + strand at 378.721 kb on - strand at 378.760 kb on + strand at 378.760 kb on + strand at 378.760 kb on + strand at 378.760 kb on + strand at 378.761 kb on - strand at 378.761 kb on - strand at 378.885 kb on + strand at 378.902 kb on + strand at 378.902 kb on + strand at 378.903 kb on - strand at 378.903 kb on - strand at 378.906 kb on - strand at 378.906 kb on - strand at 379.319 kb on + strand, within EX28DRAFT_0402 at 379.320 kb on - strand, within EX28DRAFT_0402 at 379.325 kb on + strand, within EX28DRAFT_0402 at 379.325 kb on + strand, within EX28DRAFT_0402 at 379.325 kb on + strand, within EX28DRAFT_0402 at 379.326 kb on - strand, within EX28DRAFT_0402 at 379.326 kb on - strand, within EX28DRAFT_0402 at 379.326 kb on - strand, within EX28DRAFT_0402 at 379.458 kb on + strand, within EX28DRAFT_0402 at 379.700 kb on - strand at 379.708 kb on + strand at 379.709 kb on - strand at 379.709 kb on - strand at 379.712 kb on - strand at 379.712 kb on - strand at 379.712 kb on - strand at 379.736 kb on + strand at 379.819 kb on - strand at 379.819 kb on - strand at 379.878 kb on + strand at 379.918 kb on - strand at 379.954 kb on + strand, within EX28DRAFT_0403 at 379.955 kb on - strand, within EX28DRAFT_0403 at 379.955 kb on - strand, within EX28DRAFT_0403 at 380.251 kb on + strand, within EX28DRAFT_0403 at 380.252 kb on - strand, within EX28DRAFT_0403 at 380.254 kb on - strand, within EX28DRAFT_0403 at 380.319 kb on - strand, within EX28DRAFT_0403 at 380.319 kb on - strand, within EX28DRAFT_0403 at 380.408 kb on + strand, within EX28DRAFT_0403 at 380.428 kb on + strand, within EX28DRAFT_0403 at 380.450 kb on - strand, within EX28DRAFT_0403
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 377,918 + EX28DRAFT_0401 0.59 -0.3 377,919 + EX28DRAFT_0401 0.59 -0.3 377,919 + EX28DRAFT_0401 0.59 -0.1 377,920 - EX28DRAFT_0401 0.59 +0.1 377,960 - EX28DRAFT_0401 0.61 +0.2 378,133 + EX28DRAFT_0401 0.70 -0.3 378,195 + EX28DRAFT_0401 0.73 -0.2 378,259 - EX28DRAFT_0401 0.76 +0.3 378,262 + EX28DRAFT_0401 0.76 +0.1 378,262 + EX28DRAFT_0401 0.76 +0.3 378,263 - EX28DRAFT_0401 0.76 +0.1 378,263 - EX28DRAFT_0401 0.76 -1.5 378,292 - EX28DRAFT_0401 0.78 +0.1 378,304 + EX28DRAFT_0401 0.78 -0.1 378,304 + EX28DRAFT_0401 0.78 +0.7 378,304 + EX28DRAFT_0401 0.78 +1.0 378,304 + EX28DRAFT_0401 0.78 +0.3 378,388 + EX28DRAFT_0401 0.83 +0.2 378,394 + EX28DRAFT_0401 0.83 -0.9 378,395 - EX28DRAFT_0401 0.83 -0.2 378,506 - EX28DRAFT_0401 0.89 +0.1 378,520 + EX28DRAFT_0401 0.89 -0.6 378,521 - EX28DRAFT_0401 0.89 +0.9 378,606 - -0.1 378,673 + +0.0 378,679 + -0.4 378,719 - +0.2 378,720 + +1.0 378,720 + -0.2 378,721 - +0.2 378,760 + +0.1 378,760 + +0.1 378,760 + +0.8 378,760 + +0.3 378,761 - -0.7 378,761 - +0.4 378,885 + +0.6 378,902 + +0.3 378,902 + +1.0 378,903 - -0.7 378,903 - -0.8 378,906 - +0.5 378,906 - +0.3 379,319 + EX28DRAFT_0402 0.58 +0.2 379,320 - EX28DRAFT_0402 0.58 +0.1 379,325 + EX28DRAFT_0402 0.58 -0.3 379,325 + EX28DRAFT_0402 0.58 -0.5 379,325 + EX28DRAFT_0402 0.58 +0.5 379,326 - EX28DRAFT_0402 0.59 -0.1 379,326 - EX28DRAFT_0402 0.59 +1.3 379,326 - EX28DRAFT_0402 0.59 +0.3 379,458 + EX28DRAFT_0402 0.75 +0.9 379,700 - +0.2 379,708 + -1.3 379,709 - -0.0 379,709 - -0.2 379,712 - +0.2 379,712 - +0.5 379,712 - -0.1 379,736 + -0.6 379,819 - +0.2 379,819 - -0.1 379,878 + +0.5 379,918 - -0.0 379,954 + EX28DRAFT_0403 0.13 +0.4 379,955 - EX28DRAFT_0403 0.13 +0.5 379,955 - EX28DRAFT_0403 0.13 +2.0 380,251 + EX28DRAFT_0403 0.39 -0.4 380,252 - EX28DRAFT_0403 0.39 +0.4 380,254 - EX28DRAFT_0403 0.39 +0.7 380,319 - EX28DRAFT_0403 0.45 -0.5 380,319 - EX28DRAFT_0403 0.45 +0.4 380,408 + EX28DRAFT_0403 0.52 +0.9 380,428 + EX28DRAFT_0403 0.54 +2.9 380,450 - EX28DRAFT_0403 0.56 +0.2
Or see this region's nucleotide sequence