Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0140 and EX28DRAFT_0141 are separated by 145 nucleotides EX28DRAFT_0141 and EX28DRAFT_0142 are separated by 160 nucleotides
EX28DRAFT_0140: EX28DRAFT_0140 - GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit, at 84,605 to 86,182
_0140
EX28DRAFT_0141: EX28DRAFT_0141 - hypothetical protein, at 86,328 to 86,546
_0141
EX28DRAFT_0142: EX28DRAFT_0142 - hypothetical protein, at 86,707 to 86,883
_0142
Position (kb)
86
87 Strain fitness (log2 ratio)
-2
-1
0
1 at 86.223 kb on + strand at 86.229 kb on + strand at 86.304 kb on - strand at 86.308 kb on + strand at 86.308 kb on + strand at 86.308 kb on + strand at 86.308 kb on + strand at 86.308 kb on + strand at 86.309 kb on - strand at 86.309 kb on - strand at 86.309 kb on - strand at 86.322 kb on - strand at 86.482 kb on - strand, within EX28DRAFT_0141 at 86.482 kb on - strand, within EX28DRAFT_0141 at 86.501 kb on + strand, within EX28DRAFT_0141 at 86.535 kb on - strand at 86.535 kb on - strand at 86.536 kb on + strand at 86.536 kb on + strand at 86.536 kb on + strand at 86.536 kb on + strand at 86.536 kb on + strand at 86.537 kb on - strand at 86.537 kb on - strand at 86.537 kb on - strand at 86.537 kb on - strand at 86.537 kb on - strand at 86.538 kb on + strand at 86.539 kb on - strand at 86.539 kb on - strand at 86.539 kb on - strand at 86.547 kb on - strand at 86.592 kb on + strand at 86.592 kb on + strand at 86.593 kb on - strand at 86.593 kb on - strand at 86.615 kb on - strand at 86.622 kb on - strand at 86.627 kb on + strand at 86.627 kb on + strand at 86.699 kb on + strand at 86.722 kb on - strand at 86.752 kb on - strand, within EX28DRAFT_0142 at 86.760 kb on + strand, within EX28DRAFT_0142 at 86.761 kb on - strand, within EX28DRAFT_0142 at 86.795 kb on - strand, within EX28DRAFT_0142 at 86.849 kb on + strand, within EX28DRAFT_0142 at 86.849 kb on + strand, within EX28DRAFT_0142 at 86.850 kb on - strand, within EX28DRAFT_0142 at 86.865 kb on + strand, within EX28DRAFT_0142 at 86.941 kb on + strand at 86.986 kb on - strand at 86.986 kb on - strand at 86.998 kb on + strand at 87.018 kb on - strand at 87.035 kb on - strand at 87.035 kb on - strand at 87.038 kb on + strand at 87.038 kb on + strand at 87.050 kb on - strand at 87.083 kb on - strand at 87.217 kb on - strand at 87.530 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 86,223 + +1.5 86,229 + -0.0 86,304 - +0.8 86,308 + -0.3 86,308 + -2.6 86,308 + +0.6 86,308 + -0.9 86,308 + -0.3 86,309 - -0.4 86,309 - -0.6 86,309 - +0.1 86,322 - -0.6 86,482 - EX28DRAFT_0141 0.70 -1.3 86,482 - EX28DRAFT_0141 0.70 -2.3 86,501 + EX28DRAFT_0141 0.79 +0.2 86,535 - -0.0 86,535 - +0.1 86,536 + +0.7 86,536 + +0.2 86,536 + -0.5 86,536 + -0.2 86,536 + +0.1 86,537 - -0.2 86,537 - -0.1 86,537 - +0.0 86,537 - -0.3 86,537 - +0.4 86,538 + -0.9 86,539 - -1.3 86,539 - +0.4 86,539 - +0.1 86,547 - -0.3 86,592 + +0.4 86,592 + -1.1 86,593 - -1.2 86,593 - +0.5 86,615 - -0.1 86,622 - +0.2 86,627 + +0.2 86,627 + +0.4 86,699 + +1.0 86,722 - -0.5 86,752 - EX28DRAFT_0142 0.25 +0.7 86,760 + EX28DRAFT_0142 0.30 -0.1 86,761 - EX28DRAFT_0142 0.31 +0.8 86,795 - EX28DRAFT_0142 0.50 -0.7 86,849 + EX28DRAFT_0142 0.80 -0.3 86,849 + EX28DRAFT_0142 0.80 +0.3 86,850 - EX28DRAFT_0142 0.81 +0.1 86,865 + EX28DRAFT_0142 0.89 +0.5 86,941 + -0.2 86,986 - +0.2 86,986 - +0.1 86,998 + +0.9 87,018 - -0.3 87,035 - -0.4 87,035 - -0.2 87,038 + -0.9 87,038 + -0.0 87,050 - +0.3 87,083 - +0.8 87,217 - -0.6 87,530 + -0.9
Or see this region's nucleotide sequence