Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0124 and EX28DRAFT_0125 are separated by 156 nucleotides EX28DRAFT_0125 and EX28DRAFT_0126 are separated by 169 nucleotides EX28DRAFT_0126 and EX28DRAFT_0127 are separated by 293 nucleotides
EX28DRAFT_0124: EX28DRAFT_0124 - penicillin-binding protein 1C, at 66,528 to 68,852
_0124
EX28DRAFT_0125: EX28DRAFT_0125 - nucleoside diphosphate kinase (EC 2.7.4.6), at 69,009 to 69,440
_0125
EX28DRAFT_0126: EX28DRAFT_0126 - 23S rRNA (adenine(2503)-C(2))-methyltransferase, at 69,610 to 70,776
_0126
EX28DRAFT_0127: EX28DRAFT_0127 - Uncharacterized protein conserved in bacteria, at 71,070 to 72,083
_0127
Position (kb)
69
70
71 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 68.949 kb on - strand at 68.950 kb on + strand at 68.975 kb on + strand at 69.327 kb on + strand, within EX28DRAFT_0125 at 69.439 kb on - strand at 69.457 kb on - strand at 69.464 kb on - strand at 69.472 kb on - strand at 69.513 kb on + strand at 69.514 kb on - strand at 69.587 kb on + strand at 69.609 kb on + strand at 69.610 kb on - strand at 69.620 kb on + strand at 69.620 kb on + strand at 69.628 kb on - strand at 69.718 kb on - strand at 69.770 kb on - strand, within EX28DRAFT_0126 at 69.775 kb on + strand, within EX28DRAFT_0126 at 69.943 kb on + strand, within EX28DRAFT_0126 at 69.943 kb on + strand, within EX28DRAFT_0126 at 69.944 kb on - strand, within EX28DRAFT_0126 at 70.113 kb on - strand, within EX28DRAFT_0126 at 70.254 kb on + strand, within EX28DRAFT_0126 at 70.255 kb on - strand, within EX28DRAFT_0126 at 70.255 kb on - strand, within EX28DRAFT_0126 at 70.533 kb on + strand, within EX28DRAFT_0126 at 70.534 kb on - strand, within EX28DRAFT_0126 at 70.584 kb on + strand, within EX28DRAFT_0126 at 70.653 kb on + strand, within EX28DRAFT_0126 at 70.725 kb on + strand at 70.740 kb on + strand at 70.740 kb on + strand at 70.741 kb on - strand at 70.779 kb on - strand at 70.800 kb on - strand at 70.800 kb on - strand at 70.818 kb on - strand at 70.864 kb on + strand at 70.865 kb on - strand at 70.894 kb on + strand at 70.898 kb on + strand at 70.898 kb on + strand at 70.918 kb on - strand at 70.963 kb on + strand at 70.963 kb on + strand at 70.963 kb on + strand at 70.963 kb on + strand at 70.964 kb on - strand at 70.964 kb on - strand at 70.964 kb on - strand at 71.052 kb on + strand at 71.498 kb on + strand, within EX28DRAFT_0127 at 71.498 kb on + strand, within EX28DRAFT_0127 at 71.501 kb on + strand, within EX28DRAFT_0127 at 71.501 kb on + strand, within EX28DRAFT_0127 at 71.504 kb on + strand, within EX28DRAFT_0127 at 71.720 kb on + strand, within EX28DRAFT_0127 at 71.730 kb on - strand, within EX28DRAFT_0127
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 68,949 - +1.6 68,950 + -1.2 68,975 + +0.1 69,327 + EX28DRAFT_0125 0.74 -3.5 69,439 - -0.8 69,457 - -0.6 69,464 - -0.6 69,472 - +0.8 69,513 + +0.6 69,514 - +0.6 69,587 + +0.8 69,609 + +0.4 69,610 - -0.2 69,620 + +0.2 69,620 + +0.6 69,628 - +1.0 69,718 - +0.9 69,770 - EX28DRAFT_0126 0.14 +0.2 69,775 + EX28DRAFT_0126 0.14 -1.1 69,943 + EX28DRAFT_0126 0.29 +1.1 69,943 + EX28DRAFT_0126 0.29 -0.4 69,944 - EX28DRAFT_0126 0.29 -0.4 70,113 - EX28DRAFT_0126 0.43 +0.4 70,254 + EX28DRAFT_0126 0.55 -0.4 70,255 - EX28DRAFT_0126 0.55 +0.1 70,255 - EX28DRAFT_0126 0.55 -0.3 70,533 + EX28DRAFT_0126 0.79 -0.9 70,534 - EX28DRAFT_0126 0.79 +1.1 70,584 + EX28DRAFT_0126 0.83 -0.3 70,653 + EX28DRAFT_0126 0.89 -2.1 70,725 + -0.4 70,740 + +0.2 70,740 + +0.1 70,741 - +0.2 70,779 - +1.1 70,800 - +2.0 70,800 - +1.9 70,818 - +0.4 70,864 + -1.8 70,865 - +1.3 70,894 + +1.2 70,898 + +0.5 70,898 + +0.4 70,918 - +1.4 70,963 + +0.3 70,963 + +0.4 70,963 + +1.0 70,963 + -0.2 70,964 - +1.6 70,964 - +1.3 70,964 - +1.6 71,052 + +1.1 71,498 + EX28DRAFT_0127 0.42 +1.6 71,498 + EX28DRAFT_0127 0.42 +1.8 71,501 + EX28DRAFT_0127 0.43 +1.4 71,501 + EX28DRAFT_0127 0.43 +1.6 71,504 + EX28DRAFT_0127 0.43 +0.9 71,720 + EX28DRAFT_0127 0.64 -0.0 71,730 - EX28DRAFT_0127 0.65 -1.0
Or see this region's nucleotide sequence