Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19205 and CA264_19210 are separated by 60 nucleotides CA264_19210 and CA264_19215 are separated by 308 nucleotides CA264_19215 and CA264_19220 are separated by 27 nucleotides
CA264_19205: CA264_19205 - hypothetical protein, at 4,462,202 to 4,463,296
_19205
CA264_19210: CA264_19210 - SAM-dependent methyltransferase, at 4,463,357 to 4,464,097
_19210
CA264_19215: CA264_19215 - RNA polymerase subunit sigma, at 4,464,406 to 4,464,999
_19215
CA264_19220: CA264_19220 - hypothetical protein, at 4,465,027 to 4,465,308
_19220
Position (kb)
4463
4464
4465 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4462.540 kb on + strand, within CA264_19205 at 4462.593 kb on + strand, within CA264_19205 at 4462.593 kb on + strand, within CA264_19205 at 4462.594 kb on - strand, within CA264_19205 at 4462.661 kb on + strand, within CA264_19205 at 4462.678 kb on + strand, within CA264_19205 at 4462.682 kb on + strand, within CA264_19205 at 4462.690 kb on + strand, within CA264_19205 at 4462.690 kb on + strand, within CA264_19205 at 4462.692 kb on + strand, within CA264_19205 at 4462.692 kb on + strand, within CA264_19205 at 4462.692 kb on + strand, within CA264_19205 at 4462.693 kb on - strand, within CA264_19205 at 4462.693 kb on - strand, within CA264_19205 at 4462.757 kb on - strand, within CA264_19205 at 4462.829 kb on + strand, within CA264_19205 at 4462.863 kb on - strand, within CA264_19205 at 4462.866 kb on - strand, within CA264_19205 at 4462.914 kb on + strand, within CA264_19205 at 4462.914 kb on + strand, within CA264_19205 at 4462.915 kb on - strand, within CA264_19205 at 4462.920 kb on + strand, within CA264_19205 at 4462.926 kb on - strand, within CA264_19205 at 4462.976 kb on + strand, within CA264_19205 at 4462.977 kb on - strand, within CA264_19205 at 4462.977 kb on - strand, within CA264_19205 at 4463.017 kb on + strand, within CA264_19205 at 4463.077 kb on - strand, within CA264_19205 at 4463.103 kb on - strand, within CA264_19205 at 4463.160 kb on + strand, within CA264_19205 at 4463.161 kb on - strand, within CA264_19205 at 4463.164 kb on + strand, within CA264_19205 at 4463.165 kb on - strand, within CA264_19205 at 4463.165 kb on - strand, within CA264_19205 at 4463.228 kb on + strand at 4463.277 kb on - strand at 4463.285 kb on + strand at 4463.288 kb on + strand at 4463.289 kb on - strand at 4463.314 kb on + strand at 4463.314 kb on + strand at 4463.378 kb on + strand at 4463.379 kb on - strand at 4463.379 kb on - strand at 4463.379 kb on - strand at 4463.473 kb on + strand, within CA264_19210 at 4463.478 kb on + strand, within CA264_19210 at 4463.479 kb on - strand, within CA264_19210 at 4463.479 kb on - strand, within CA264_19210 at 4463.479 kb on - strand, within CA264_19210 at 4463.500 kb on - strand, within CA264_19210 at 4463.500 kb on - strand, within CA264_19210 at 4463.558 kb on + strand, within CA264_19210 at 4463.561 kb on + strand, within CA264_19210 at 4463.561 kb on + strand, within CA264_19210 at 4463.734 kb on + strand, within CA264_19210 at 4463.743 kb on + strand, within CA264_19210 at 4463.743 kb on + strand, within CA264_19210 at 4463.762 kb on + strand, within CA264_19210 at 4463.762 kb on + strand, within CA264_19210 at 4463.765 kb on + strand, within CA264_19210 at 4463.903 kb on + strand, within CA264_19210 at 4463.971 kb on + strand, within CA264_19210 at 4464.030 kb on - strand at 4464.064 kb on + strand at 4464.064 kb on + strand at 4464.141 kb on + strand at 4464.141 kb on + strand at 4464.142 kb on - strand at 4464.145 kb on + strand at 4464.146 kb on - strand at 4464.146 kb on - strand at 4464.146 kb on - strand at 4464.172 kb on - strand at 4464.175 kb on + strand at 4464.186 kb on - strand at 4464.186 kb on - strand at 4464.233 kb on - strand at 4464.236 kb on + strand at 4464.270 kb on - strand at 4464.270 kb on - strand at 4464.271 kb on + strand at 4464.279 kb on + strand at 4464.338 kb on - strand at 4464.347 kb on - strand at 4464.360 kb on - strand at 4464.398 kb on + strand at 4464.399 kb on - strand at 4464.433 kb on - strand at 4464.436 kb on - strand at 4464.494 kb on - strand, within CA264_19215 at 4464.505 kb on + strand, within CA264_19215 at 4464.519 kb on - strand, within CA264_19215 at 4464.545 kb on + strand, within CA264_19215 at 4464.556 kb on + strand, within CA264_19215 at 4464.556 kb on + strand, within CA264_19215 at 4464.557 kb on - strand, within CA264_19215 at 4464.569 kb on - strand, within CA264_19215 at 4464.600 kb on + strand, within CA264_19215 at 4464.710 kb on - strand, within CA264_19215 at 4464.710 kb on - strand, within CA264_19215 at 4464.834 kb on + strand, within CA264_19215 at 4464.846 kb on + strand, within CA264_19215 at 4464.908 kb on + strand, within CA264_19215 at 4464.918 kb on - strand, within CA264_19215 at 4464.975 kb on + strand at 4464.976 kb on - strand at 4464.991 kb on - strand at 4465.023 kb on + strand at 4465.049 kb on + strand at 4465.097 kb on + strand, within CA264_19220
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 4,462,540 + CA264_19205 0.31 -1.4 4,462,593 + CA264_19205 0.36 -0.5 4,462,593 + CA264_19205 0.36 -1.8 4,462,594 - CA264_19205 0.36 -0.7 4,462,661 + CA264_19205 0.42 -1.4 4,462,678 + CA264_19205 0.43 -0.4 4,462,682 + CA264_19205 0.44 -1.0 4,462,690 + CA264_19205 0.45 -1.7 4,462,690 + CA264_19205 0.45 -1.3 4,462,692 + CA264_19205 0.45 -0.4 4,462,692 + CA264_19205 0.45 -2.0 4,462,692 + CA264_19205 0.45 -0.9 4,462,693 - CA264_19205 0.45 -0.2 4,462,693 - CA264_19205 0.45 -0.5 4,462,757 - CA264_19205 0.51 -0.9 4,462,829 + CA264_19205 0.57 +0.3 4,462,863 - CA264_19205 0.60 -2.2 4,462,866 - CA264_19205 0.61 +1.1 4,462,914 + CA264_19205 0.65 -1.9 4,462,914 + CA264_19205 0.65 +0.1 4,462,915 - CA264_19205 0.65 +1.6 4,462,920 + CA264_19205 0.66 -0.8 4,462,926 - CA264_19205 0.66 -0.7 4,462,976 + CA264_19205 0.71 -1.4 4,462,977 - CA264_19205 0.71 -1.7 4,462,977 - CA264_19205 0.71 -1.4 4,463,017 + CA264_19205 0.74 -1.1 4,463,077 - CA264_19205 0.80 -0.7 4,463,103 - CA264_19205 0.82 -1.3 4,463,160 + CA264_19205 0.87 -0.2 4,463,161 - CA264_19205 0.88 -1.0 4,463,164 + CA264_19205 0.88 -0.1 4,463,165 - CA264_19205 0.88 -1.7 4,463,165 - CA264_19205 0.88 +0.2 4,463,228 + -1.9 4,463,277 - -1.2 4,463,285 + +0.5 4,463,288 + -0.4 4,463,289 - -1.8 4,463,314 + +0.3 4,463,314 + -0.6 4,463,378 + +0.1 4,463,379 - -1.0 4,463,379 - -0.4 4,463,379 - -2.0 4,463,473 + CA264_19210 0.16 -1.3 4,463,478 + CA264_19210 0.16 -1.6 4,463,479 - CA264_19210 0.16 -1.0 4,463,479 - CA264_19210 0.16 -0.9 4,463,479 - CA264_19210 0.16 -0.6 4,463,500 - CA264_19210 0.19 +0.5 4,463,500 - CA264_19210 0.19 -0.0 4,463,558 + CA264_19210 0.27 -1.2 4,463,561 + CA264_19210 0.28 +0.9 4,463,561 + CA264_19210 0.28 -0.4 4,463,734 + CA264_19210 0.51 -0.9 4,463,743 + CA264_19210 0.52 -0.4 4,463,743 + CA264_19210 0.52 +0.7 4,463,762 + CA264_19210 0.55 -0.6 4,463,762 + CA264_19210 0.55 -0.2 4,463,765 + CA264_19210 0.55 -1.9 4,463,903 + CA264_19210 0.74 -1.0 4,463,971 + CA264_19210 0.83 -1.4 4,464,030 - -0.2 4,464,064 + -0.9 4,464,064 + -1.2 4,464,141 + +1.3 4,464,141 + +1.0 4,464,142 - +0.8 4,464,145 + +0.9 4,464,146 - +0.6 4,464,146 - +0.8 4,464,146 - +0.8 4,464,172 - +2.4 4,464,175 + +1.6 4,464,186 - +0.8 4,464,186 - +0.8 4,464,233 - +0.6 4,464,236 + +0.8 4,464,270 - +1.1 4,464,270 - +1.4 4,464,271 + +0.4 4,464,279 + +1.3 4,464,338 - +1.0 4,464,347 - +1.4 4,464,360 - +1.6 4,464,398 + +0.9 4,464,399 - +1.0 4,464,433 - +0.8 4,464,436 - +1.2 4,464,494 - CA264_19215 0.15 +1.2 4,464,505 + CA264_19215 0.17 +0.7 4,464,519 - CA264_19215 0.19 +1.1 4,464,545 + CA264_19215 0.23 +1.8 4,464,556 + CA264_19215 0.25 +2.2 4,464,556 + CA264_19215 0.25 +0.6 4,464,557 - CA264_19215 0.25 +2.3 4,464,569 - CA264_19215 0.27 +0.2 4,464,600 + CA264_19215 0.33 +3.4 4,464,710 - CA264_19215 0.51 +0.7 4,464,710 - CA264_19215 0.51 +1.4 4,464,834 + CA264_19215 0.72 +0.4 4,464,846 + CA264_19215 0.74 +0.3 4,464,908 + CA264_19215 0.85 +0.9 4,464,918 - CA264_19215 0.86 +2.2 4,464,975 + -2.1 4,464,976 - +0.4 4,464,991 - +1.2 4,465,023 + -0.6 4,465,049 + -0.4 4,465,097 + CA264_19220 0.25 +0.1
Or see this region's nucleotide sequence